LOCUS       NM_001408761             461 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus histone cluster 1, H2ai-like2 (hist1h2ail2),
            mRNA.
ACCESSION   NM_001408761 XM_577577
VERSION     NM_001408761.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 461)
  AUTHORS   Singh,R., Mortazavi,A., Telu,K.H., Nagarajan,P., Lucas,D.M.,
            Thomas-Ahner,J.M., Clinton,S.K., Byrd,J.C., Freitas,M.A. and
            Parthun,M.R.
  TITLE     Increasing the complexity of chromatin: functionally distinct roles
            for replication-dependent histone H2A isoforms in cell
            proliferation and carcinogenesis
  JOURNAL   Nucleic Acids Res 41 (20), 9284-9295 (2013)
   PUBMED   23956221
REFERENCE   2  (bases 1 to 461)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   3  (bases 1 to 461)
  AUTHORS   Gonzalez-Begne,M., Lu,B., Han,X., Hagen,F.K., Hand,A.R.,
            Melvin,J.E. and Yates,J.R.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
REFERENCE   4  (bases 1 to 461)
  AUTHORS   Bonenfant,D., Coulot,M., Towbin,H., Schindler,P. and van Oostrum,J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
REFERENCE   5  (bases 1 to 461)
  AUTHORS   Boyne,M.T. 2nd, Pesavento,J.J., Mizzen,C.A. and Kelleher,N.L.
  TITLE     Precise characterization of human histones in the H2A gene family
            by top down mass spectrometry
  JOURNAL   J Proteome Res 5 (2), 248-253 (2006)
   PUBMED   16457589
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jun 23, 2022 this sequence version replaced XM_577577.8.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582424.935085.1,
                                        SRR26360176.1893823.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-461               JAXUCZ010000017.1  47448902-47449362
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..461
                     /gene="hist1h2ail2"
                     /gene_synonym="Hist1h2ai; RGD1562827"
                     /note="histone cluster 1, H2ai-like2"
                     /db_xref="GeneID:502129"
                     /db_xref="RGD:1562827"
     exon            1..461
                     /gene="hist1h2ail2"
                     /gene_synonym="Hist1h2ai; RGD1562827"
                     /inference="alignment:Splign:2.1.0"
     CDS             33..425
                     /gene="hist1h2ail2"
                     /gene_synonym="Hist1h2ai; RGD1562827"
                     /note="histone cluster 1, H2ai; histone H2A type 1;
                     histone H2A type 1-B"
                     /codon_start=1
                     /product="histone cluster 1, H2ai-like2"
                     /protein_id="NP_001395690.1"
                     /db_xref="GeneID:502129"
                     /db_xref="RGD:1562827"
                     /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERV
                     GAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVT
                     IAQGGVLPNIQAVLLPKKTESHHKAKGK"
ORIGIN      
        1 agtgagtaga ttctagtttt cgtttctttg ctatgtctgg acgtgggaag cagggcggca
       61 aggctcgcgc caaggccaag acccggtcct cccgggcggg cctgcagttt cccgtgggcc
      121 gcgtgcaccg tctgctgcgt aagggcaact attcggagcg ggtgggcgcc ggcgccccgg
      181 tgtacctggc ggccgtgctg gagtacctga cggccgagat cctggagctg gcgggcaacg
      241 cagcgaggga caacaagaag acgcgcatca tcccgcgcca cctgcagctg gccatccgca
      301 acgacgagga gctcaacaag ctgctgggcc gcgtgaccat cgcacagggc ggcgttctgc
      361 caaacatcca ggcggtgctg ctgcccaaga agaccgagag ccaccacaag gctaagggga
      421 agtaagacca gggatcacca aaggctcttt tcagagccac c
//
