LOCUS       XM_233348               4097 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zyg-11 family member A, cell cycle
            regulator (Zyg11a), mRNA.
ACCESSION   XM_233348
VERSION     XM_233348.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_233348.11.
            
            On Jan 21, 2021 this sequence version replaced XM_233348.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4097
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4097
                     /gene="Zyg11a"
                     /note="zyg-11 family member A, cell cycle regulator;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, 3 Proteins, and 90% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:313482"
                     /db_xref="RGD:1309582"
     CDS             118..2400
                     /gene="Zyg11a"
                     /codon_start=1
                     /product="protein zyg-11 homolog A"
                     /protein_id="XP_233348.6"
                     /db_xref="GeneID:313482"
                     /db_xref="RGD:1309582"
                     /translation="MVHFLHPLLWPRTLVLPYAQQDAQGHCLVQEEASPYPLVNICMD
                     VLIAKLDKWCSKRPDGTLCLPEHWYFPHEIADKFLERMAWQGKLTDRTASIFQGKQVS
                     LKLMNIRRVKLSAAAFTQAFCHHKLTEVDATSVDSQLLAPDIVHALQGSAWIQKNLQC
                     LVLDSVSVPQNSGLLALGQFTGLHTLSLANVSFRNEDLVGVSQLPSLESLDISNTLVT
                     DISALLSCKNRLRSLTMHYLKCLAMNNPQILDVIRQLKCLLHLDISDHRQLKSDLAFY
                     LLQQKDILPNLISLDISGGTDITDQVVESFLQHRPAMRFVGLLYTDAGYSDFFMGRQD
                     LKVAGGANMSQISEALSRYRHRSCFVKEALYRLFTETLSLRVILPVVLKLVAIGMRNH
                     PLDLPVQFTASACALNLTHQGLARGMPVRLLSEITYLLFKATKNFPYYQQLQKNCLLS
                     LTSSRILMDVPFDRFDAARLVLRWVCKRESPKMQMMAVSITSILALKLSPEEIEQFQE
                     ELALAVKELLTIIRQKMAENLNDVTLLFTLKALWNLTDECPLACKYFIENEGLATIVQ
                     VLETFSVSAIQSKVLGLLNNMAEVRELSPALVTEDLMEHTVSLLHSSDIEVSFLAAGV
                     IAHLTCDRQQWLSHSPRRRALLQDLHLTIQNWPSSRCDMSALVTYRSFKAFPPLLVNF
                     SQPEVQRWALWAIHHVCNKNPSKYCKLLLEEGGLQLMYDIQEHDQASAQVRQMVSSIL
                     KEFRMHFTSFRRPPQPQRPF"
ORIGIN      
        1 cggtggacct gtgcgcggcg tggggcggcg attcaaacgc cgggcgacct tcctgcgctc
       61 tcctcctgtg ctccgcggcg cgacgtcggc gtccgggctc gcgcgagcgg gggcgtcatg
      121 gtccacttct tgcacccgtt gctgtggccg cggaccctcg tcctgcccta cgcccagcag
      181 gacgcgcagg gccactgctt ggtgcaggag gaagcatcgc cctacccttt ggtcaacatc
      241 tgcatggatg tcttaatcgc caaattggac aaatggtgtt ctaaaagacc tgatggaaca
      301 ctgtgtcttc cagagcattg gtatttccct cacgaaatag ctgataaatt ccttgagagg
      361 atggcttggc aaggcaagct gaccgacagg acagcaagca ttttccaagg caagcaggtg
      421 agcctgaagc tgatgaacat tcggagagtc aaactctcgg cagcagcctt cacacaggcc
      481 ttctgccatc acaagctcac cgaagtggat gccacctcag tggactccca gcttctcgcc
      541 ccagacatcg tccacgctct ccagggcagt gcctggatcc agaaaaacct tcagtgtctt
      601 gtgttagact cggttagcgt ccctcagaac tcagggctac tagccttggg tcagttcacc
      661 ggccttcaca ccttgagcct tgccaatgtg tcctttcgca atgaagacct agttggcgtt
      721 tctcagttac ccagcctgga aagcttggat atctccaata ctctggtcac cgacatctcc
      781 gcactcctct cctgtaagaa ccggctcagg tccctcacca tgcactatct gaagtgcctg
      841 gccatgaaca acccacagat tctcgacgtt atccgtcagc tgaaatgcct gcttcacctt
      901 gatatttctg accacaggca gctcaaatca gacctggctt tttatttgtt acagcagaag
      961 gacatcctgc ccaacctcat atccctggat atttcggggg gcactgacat cactgatcaa
     1021 gttgtggagt cctttctgca gcaccggcct gccatgcgat ttgtgggact cttgtataca
     1081 gatgctggtt actctgattt ctttatggga aggcaggact tgaaggttgc tggaggagcc
     1141 aacatgagtc agatttctga agcactgagt cggtacaggc accggtcatg ttttgtgaag
     1201 gaagcgctct ataggctctt cacggaaaca ctttccttgc gggtcatcct gcctgtcgtg
     1261 ctaaagcttg tggctatagg aatgaggaac catccgttgg atctgccagt gcagttcaca
     1321 gccagtgctt gtgccctcaa cctaacacac cagggcctgg ccaggggaat gcctgttcgc
     1381 ctgttgtcag agatcaccta tctacttttc aaagcaacga aaaatttccc ctactaccaa
     1441 cagttacaga agaattgcct tctctcctta accagttcca ggattcttat ggacgttcca
     1501 tttgacaggt ttgacgctgc caggcttgtt ctgaggtggg tgtgcaagcg tgagagccca
     1561 aagatgcaga tgatggcagt gagcatcacc tccatcctag ccctgaagct ctcacctgag
     1621 gagatcgaac agttccagga ggagcttgct ttagcagtca aggaacttct aacaatcatc
     1681 agacaaaaga tggctgagaa tttaaatgat gtcaccctct tgtttactct gaaagcgctt
     1741 tggaacctta cggatgagtg tccattggcc tgcaagtact ttattgaaaa tgaaggatta
     1801 gcaaccatcg tccaagtctt agagacattt tcagtgtctg caatacagag caaagtgctt
     1861 ggacttttga acaacatggc tgaagtcaga gagctctctc ccgcgctggt gacagaagat
     1921 ttgatggaac acaccgtcag tttgctccac agcagcgaca tagaagtgag cttcttggct
     1981 gcaggagtaa tagcccacct gacctgtgac agacagcaat ggctatccca cagcccgcga
     2041 aggcgtgctc ttctccagga cttgcactta accatccaga actggccaag ttcacggtgt
     2101 gacatgtcag cattggtgac ctacagatct ttcaaagcat ttcccccact ccttgtcaac
     2161 ttctctcagc cagaagttca gcgctgggca ctgtgggcca tacatcatgt ttgcaataaa
     2221 aaccctagca aatactgcaa gctgttgtta gaggaaggag gacttcagct catgtacgac
     2281 atccaggagc acgatcaggc cagtgcccag gtgaggcaga tggtgtcctc catcctgaag
     2341 gagttcagga tgcacttcac aagcttccgg agacccccac aaccccagcg ccctttttga
     2401 cctagggccc ttttgcgggt gctgcttctt aaagacagga ctttcgtctc ttgagtaatg
     2461 ggattttgaa accagttttt ggtttaccag ttgttggcat ttattaactg actgtctttt
     2521 gcttttctct gtggcaaaaa gattgggtcc ttggctgggc agtgggaggc agagagacag
     2581 gtggatctta gtgagttcaa gcccagccag gactacacag agaaaccctg tcttgaaaaa
     2641 acaagaaatg attgggtccc tcttattcct tcagaacagg ggagaaaact ttagggagac
     2701 cttggtgttg ttcatttcct cagctgctcc aggttagcag tggctgagtc tggccttgag
     2761 cgcagcaatg ctactgcttc agtgctgggg ctgccagcat gagctgccag accctgacag
     2821 ctttaacttt cttttgtttc tcctccaatc tgaggaatca gatcattgag tgtgtgtgtg
     2881 aacatgtggg gttgaagtgc aggcctgggg ctgaggactg aagtgagaga aaagagtaca
     2941 ttggaaatcc tcactttgga aaagctatgt ccaaagctga gagaaagatg aagggcccca
     3001 gaaaggctgc agaacatttc agtggatgct tttcctaatg tggacacaaa agggggtggt
     3061 tttatgagaa ccagccctgg cagtaatgaa caccatctgc agttgtgccc tgcagaacca
     3121 ttgagaaagt aaatagtaaa ttcctctttg gatattagag agcttttttc tttagattct
     3181 cttctctctc tctctctctc tctctctctc tctctctctc tctctctctc tgtgtgtgtg
     3241 tgtgtgtgtg tctgtgtgtc tgtgtgtctg tgtctgtgtc tgtgtctgtg tgttagtggc
     3301 ctgcatgttt gggcaccatg tgtgagtctg gtattcacca agatcagaag gcagtggatc
     3361 cactagaact ggagttagga tggctgggag ctaccacatg ggcattggga accaaacccc
     3421 agtcctctga agagcagcgg atgaacttaa ctactgagcc atctctgtag gcccctgggt
     3481 attagagttt tgtgccttta gctagtgtgg tacggaccta agacattact ctgtgcacgt
     3541 gtgtttgtgt tacatccatg cgtgcgtcca agtaaatgcc tgcagaggcc agaagagcat
     3601 tgaatttgga gctagggtta cagacagttg tcagctgggc tggggaccaa gcttgggtcc
     3661 tctgctcgag tagtaagcac tgttactcac tcactcttac ccatctttct ggccaagtct
     3721 cttaactgga gttgtagcgt aagccctctc tgagcatcag ttgaggaagg aactcattct
     3781 taactattcc aagctacagt cccagcaatg agaaggaaca ggtagatgga tctgaagtta
     3841 aggcgccttg gctacatatc accttgcttc tgctcttcac tgcctcagat aataaggttc
     3901 ttagtttgtg aacctgggtc ctagtacctg ggaacactgt attccctttg ctagcgggaa
     3961 ggtgtgaatg ggggtatctg gtatagtctg ttggcatttc atctaggcgc ctccccacag
     4021 ttgcctggca acagccaggt gtgcctgact cactataaaa ggggctgctt gccccctcct
     4081 ctctctcctg cttttgc
//
