LOCUS       NM_001011960            2079 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger, SWIM-type containing 2 (Zswim2),
            mRNA.
ACCESSION   NM_001011960 XM_230947
VERSION     NM_001011960.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Nishito,Y., Hasegawa,M., Inohara,N. and Nunez,G.
  TITLE     MEX is a testis-specific E3 ubiquitin ligase that promotes death
            receptor-induced apoptosis
  JOURNAL   Biochem J 396 (3), 411-417 (2006)
   PUBMED   16522193
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079431.1.
            
            [WARNING] On May 10, 2024 this sequence was replaced by
            NM_001011960.2.
            
            On Feb 11, 2005 this sequence version replaced XM_230947.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079431.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..2079
                     /gene="Zswim2"
                     /note="zinc finger, SWIM-type containing 2"
                     /db_xref="GeneID:296455"
                     /db_xref="RGD:1311373"
     exon            1..200
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1931
                     /gene="Zswim2"
                     /EC_number="2.3.2.27"
                     /note="zinc finger, SWIM domain containing 2; zinc finger
                     SWIM domain-containing protein 2"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase ZSWIM2"
                     /protein_id="NP_001011960.1"
                     /db_xref="GeneID:296455"
                     /db_xref="RGD:1311373"
                     /translation="MLRGGCKASEKRRHLSESLSWQQDQALSSSIYLLRQIGPTGFLL
                     REEEPENGDFRVLLGNPHECSCPTFLKRGELCKHICWVLLKKFKLPRNHESAFQLGLT
                     EGEINDLLRGIHQVQTPQLRASEETARVEEDGYLKQKDISAGDICPICQEVLLEKRLP
                     VTFCRFGCGNNVHIKCMRILANYQDTVSDTSMLKCPLCREEFAPLKVILEEFKNSNKL
                     MTISEKERLDKHLGIPCNNCTQLPIEGKCYKCTECVEYHLCQECFDSCYHPSHAFVFR
                     EKRNQRWRSVEKRSDVVKYLDTKNEGEANMPYFKEKPGQFYTPKHVVKSLPLLLITKN
                     SKLLAPGYQCRLCLKSFCLGQYTRLLPCTHKFHRKCIDNWLFHKCNSCPIDRQVIYNP
                     LIWKGAAMDGQAHQLASNKDIAHLSKQQEPKLFIPGTGLVLKQNRTGILPRIPQYNSK
                     VLTTFPNPSDNYQNITMDDLCSVKIDNSDSRKLVFGYKISKPFPTYLQDPAAGPTPSQ
                     TFLPSLPHKNVICLTGRESPHIYEKDHTGRSQKTSRGYEHINYNTRKALGTRLRQHKR
                     SSTLSTEDLNLTINWGTTKLSLSKKPNNSTGKVRQKCGRPPRRPAYHPLQTQSAALSL
                     IMEGIQL"
     exon            201..277
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
     exon            278..318
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
     exon            319..529
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
     exon            530..781
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
     exon            782..866
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
     exon            867..976
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
     exon            977..1130
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
     exon            1131..2054
                     /gene="Zswim2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaaagcttaa cgtagaggcg ccacggccgc cagggatgct tcgcggaggc tgtaaagcct
       61 ccgaaaagcg aagacactta agcgagagcc tcagctggca gcaagaccag gcgctgagta
      121 gtagcatcta cctcctgcga cagatcggcc caacaggctt cctactgagg gaggaggagc
      181 cagaaaacgg ggatttccga gttttgcttg gaaacccaca tgagtgcagc tgtcccacgt
      241 ttctgaaaag gggggaactg tgcaagcaca tatgctgggt gttattgaaa aaattcaagc
      301 ttccaaggaa tcatgaatct gctttccagt tgggtcttac cgagggagaa ataaatgact
      361 tgctacgggg catacatcag gtccaaactc cgcaacttag ggcaagcgaa gagactgcac
      421 gggtggaaga agatggctac cttaagcaga aagacatcag tgcaggggac atctgcccta
      481 tctgccaaga ggtgctgctg gagaaaaggc tccctgtcac cttctgcaga tttggctgcg
      541 gcaataacgt ccacataaaa tgcatgagga ttttagccaa ctaccaagac acggtgtctg
      601 acacatccat gttaaaatgt ccgctgtgca gggaagagtt tgcaccacta aaagttatct
      661 tggaggagtt caaaaactct aacaaactta tgaccatttc tgagaaagaa cgactggaca
      721 aacacctcgg gattccctgt aacaactgta cccagctgcc aatcgagggg aagtgctaca
      781 agtgcactga atgtgtggag tatcacttat gccaggagtg cttcgacagc tgttaccacc
      841 cctcccatgc ctttgtgttc cgggagaaaa gaaatcaaag atggagatca gtagaaaaaa
      901 gatcagatgt tgtaaaatat ttagatacta aaaatgaggg agaagcaaat atgccatatt
      961 ttaaagaaaa gccaggtcag ttttacaccc cgaagcatgt tgtgaagtct ctgcctctcc
     1021 ttctgattac aaagaacagc aagctgctcg ccccagggta ccagtgtcga ctttgcttga
     1081 agtcattttg tctcggtcaa tacacaagac tgctaccatg tactcacaag tttcacagga
     1141 aatgtattga caattggtta ttccacaagt gcaattcatg ccctattgac agacaagtca
     1201 tatataaccc tctgatctgg aaaggcgcag ccatggatgg acaagcacac cagctggcct
     1261 caaacaaaga catcgcccat ctgtcgaagc agcaagagcc aaaacttttc attcctggta
     1321 ctggattagt tttaaaacaa aatagaactg gaattttacc tagaattccc cagtataatt
     1381 ctaaagtatt gactacattt ccaaatccat cagataacta tcagaatata acaatggatg
     1441 acctatgctc agtcaaaata gataattcag attcaagaaa attagttttt gggtataaaa
     1501 ttagtaaacc gttccccaca tatctgcaag acccagccgc tgggccaaca ccatctcaaa
     1561 catttcttcc ctcccttcct cataagaacg ttatttgtct cactggaagg gaaagcccac
     1621 atatctatga aaaagatcat actggtcgaa gccagaagac aagcagaggt tatgaacata
     1681 taaactataa cacaaggaaa gctctcggca ctagattaag acaacacaag agatcaagta
     1741 cattatctac agaagattta aatcttacta tcaactgggg tacaaccaaa cttagtttgt
     1801 ctaaaaaacc taataattcc acagggaaag ttagacaaaa atgtggtcgt ccgcccagac
     1861 gacctgcata tcacccttta cagacacaaa gtgctgctct gtctttaata atggaaggaa
     1921 ttcaactgtg aaaaataagc atttttatta caccagaaaa acttgaatat ttaatatgca
     1981 aaatatttta tttgtagtac ataagaatcc atgtacaccc ctgacaaata tatatataaa
     2041 atactctatc atcaaaaaaa aaaaaaaaaa aaaaaaaaa
//
