LOCUS       NM_001398988            2403 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus zinc finger, SWIM-type containing 1 (Zswim1),
            mRNA.
ACCESSION   NM_001398988 XM_006235629
VERSION     NM_001398988.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Sutherland,H.G., Mumford,G.K., Newton,K., Ford,L.V., Farrall,R.,
            Dellaire,G., Caceres,J.F. and Bickmore,W.A.
  TITLE     Large-scale identification of mammalian proteins localized to
            nuclear sub-compartments
  JOURNAL   Hum Mol Genet 10 (18), 1995-2011 (2001)
   PUBMED   11555636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Dec 29, 2021 this sequence version replaced XM_006235629.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.15643.1,
                                           SRR26643285.14336.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-186               JAXUCZ010000003.1  173978442-173978627
            187-2403            JAXUCZ010000003.1  173979943-173982159
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..2403
                     /gene="Zswim1"
                     /note="zinc finger, SWIM-type containing 1"
                     /db_xref="GeneID:311631"
                     /db_xref="RGD:1305715"
     exon            1..186
                     /gene="Zswim1"
                     /inference="alignment:Splign:2.1.0"
     exon            187..2403
                     /gene="Zswim1"
                     /inference="alignment:Splign:2.1.0"
     CDS             328..1695
                     /gene="Zswim1"
                     /note="zinc finger, SWIM domain containing 1;
                     rCG32422-like"
                     /codon_start=1
                     /product="zinc finger SWIM domain-containing protein 1"
                     /protein_id="NP_001385917.1"
                     /db_xref="GeneID:311631"
                     /db_xref="RGD:1305715"
                     /translation="MALTMLNGLLIKDSSPPMLHQISKTPQLDAFNYQSCFMQDLFAH
                     FPDVLFIHRTYNPRGKVLYTFLVDGPRVQVEGPLARAVYFAIPTNEDARGLAQMFQVF
                     KKFNPAWERITTILVDPHFLLLPTLTMEFPAAEVLLSAFHICKFLQGKFYQLSLEQPV
                     QSVLLSSLQSTMCSATAGNLRKLYTLLNTCIPPSRLPELHSHWLLNDRIWLAHRWRSR
                     AQSNRYFQTLEVTAHVLSQFFGATPFEKQGMASVFRYMQQNPSDKANLSLVESPQDSQ
                     PPSDASPENPNTEQLVEARIQHSLNAICTGPAAQLCLGELAVVQKSMHLIGSGSEKMN
                     IQILEDTHNVQPQSPASCSCYFNQAFHLPCRHILAMLSARQQVLQPDMLQTQWTSGCA
                     TSLDSILGSKWSASLDKHLAVTLLTEEVGRLLEHCSKEEFERRYSTLRELADSWIGPY
                     EQVQL"
ORIGIN      
        1 agtcggaggc gggcccagtg ggagaaatgg ctgctgcgtc gggtgtgcgt gaacggtccc
       61 ggtggtggag gcgtgaaacc ggtcgcagcg gttagtgcat acagtttcca ccagtggaag
      121 gtggatttcg actccgctgg gcttgaaaac gaatctcagc cttccgcgtc cccaacccgg
      181 gctcaggccc atctgaaaca gtacctaaaa ctacagtcta gcttcaagca tcaaattacg
      241 tggcatttga gaaacttact gcttccctgt cagcgatcct gcagaggaag gatccttgcc
      301 tgggctttag acacttccca gcactccatg gccctcacaa tgctgaatgg tctacttatt
      361 aaggactcca gcccacccat gctgcaccag attagcaaga ctcctcagct agatgccttc
      421 aactaccaaa gctgcttcat gcaagacctc tttgctcatt tccctgatgt cttatttata
      481 caccggacct acaacccaag aggcaaggtg ttatacacct tcctggtgga tggaccccgg
      541 gtacaggttg agggtcctct tgcccgagca gtatactttg ccatccctac caatgaagat
      601 gcccgaggcc tggcccagat gttccaggtg ttcaaaaagt ttaacccagc ctgggagaga
      661 atcactacca ttctggtgga cccccacttc ctcctgctgc ccaccctgac catggagttc
      721 cctgctgctg aggtcttgct ctcagccttc catatttgta aattcctcca gggtaagttc
      781 tatcagctct ccctggagca gcccgtacaa agtgtgctcc tgtcctccct gcagagcaca
      841 atgtgctcgg ccacggccgg caacctgcgg aagctgtaca cactcctgaa tacctgcatc
      901 ccccccagca ggctgcctga gctccactca cactggctgc tcaatgaccg catctggctg
      961 gcccaccgct ggagaagccg agcccagagc aaccgatact tccagactct ggaggtaaca
     1021 gcccacgtcc tcagtcagtt ttttggcgcc accccatttg agaaacaagg catggcctct
     1081 gtgttccgat acatgcaaca gaacccttca gacaaagcaa acctcagcct ggtggagagt
     1141 ccccaggaca gtcagcctcc ttcagatgcc agccctgaaa accccaacac agagcagttg
     1201 gtagaagccc gtatccagca ctccctcaat gccatctgca cagggccagc tgcccaactc
     1261 tgcctaggtg agctcgctgt agtccagaag tccatgcatc tcattggctc tggctcagaa
     1321 aaaatgaaca tacagattct ggaggacacg cacaacgtcc agccccagtc ccctgccagc
     1381 tgcagctgct actttaacca agccttccac ctgccctgcc gccacatcct cgccatgctc
     1441 agtgcccgcc agcaggtgct ccagcctgac atgctgcaga ctcagtggac ctcaggctgt
     1501 gccaccagtc tagacagtat cctaggcagc aagtggagtg ccagcctgga taagcacctg
     1561 gctgtgaccc tcctcactga ggaggtcggt cggctcttag agcactgcag caaggaggag
     1621 tttgagcgcc gctatagcac ccttcgggaa cttgccgaca gctggatcgg cccttatgag
     1681 caggtacagc tctaatcaca catgggcatg gccagttctg gggactgaac ccagggtagt
     1741 acacgtgtta ggcagggact cttctactac tgcctcttta gttcttattt cgagatagcc
     1801 tctcactagg ctgcccaggc tactcttgga ctcccactgt agacaggcgg gctttgaact
     1861 tgtgagcctc ctaacgagcc tgctcagtaa gtgggattat aagcctgtgt caacaggcct
     1921 aacttatgat tgtatgtgtg ccctgacatg ttcatgtaca taggatcatt cacttccgcc
     1981 cctctacaca cactctgctt ccttccggaa gtctgctctg ctctagcctc ttgtctagat
     2041 tgtgtcatgc tccacagaag tcagaaaatc tttcctgtta agggttcaat agtaaatatc
     2101 acaggctttg acggccaaat acagtcactg ttgtgcattc tggattcagt tttgacaact
     2161 ttttcataag taagattgat ttgtaactta agaagtttct ggaaacagct ggttccttaa
     2221 gggaaataat gggtggtaag gctgaaggtt ctgtgttggt aactcctgct cagtcatgat
     2281 gggactcact tggctctgac cctggaactc tccatgaagg aagaggctac tttggtgggg
     2341 ctgccagagt tcccagttct gtcccaccct gggatgggat caataaagtg aatgttgtct
     2401 ccc
//
