LOCUS       XM_578644               1527 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger and SCAN domain containing
            4F (Zscan4f), mRNA.
ACCESSION   XM_578644
VERSION     XM_578644.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_578644.5.
            
            On Jan 21, 2021 this sequence version replaced XM_578644.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1527
                     /gene="Zscan4f"
                     /note="zinc finger and SCAN domain containing 4F; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:503124"
                     /db_xref="RGD:1563625"
     CDS             1..1527
                     /gene="Zscan4f"
                     /codon_start=1
                     /product="zinc finger and SCAN domain containing protein
                     4F-like"
                     /protein_id="XP_578644.3"
                     /db_xref="GeneID:503124"
                     /db_xref="RGD:1563625"
                     /translation="MASEIKEALKHKTAAKYLQKDNLEFIPTHASPVQWGEIFSDSSS
                     AQLNFSPSKNGFSAKQELQKLWQMFNSWLQPEKQSKEQMISQLVLEQFLLTGHCKDNF
                     VLKEIWEASGRNMGRFLEGLTDECLKPPAMVYVSMQGLEAQFSENMPLKEVIKILEQQ
                     KLATGLTPESTQMPVHIAEDILLATGQENSENKHTSGNSTEVNIGDSSTGHEMNSLLI
                     IQKEQCPEQEDGLDSFQFTQGARASQGNSSHHVEFLSAHTWRDIPMEAQPVIFYRTNI
                     SEDREECCTTSKNATQENSADNIPMRKMDSVFINQRMYHPEPKMGDVSCGVPQGFTRS
                     PGTSTSQQESLGLTFSEDDPRDIPGVPSRPEKLSSEAVLLYQNQEANSTSKSHQKRLH
                     VGPKQYNCEECPRTFKYASHLSLHQRTHQNKKAFVCPTCQKTFKRASDLRCHEIIHNP
                     EKPFKCSTCEKSFSHKTNLKAHERIHTGEKPYVCSLCSHRFCQSSTYNRHLRNVHKSD
                     "
ORIGIN      
        1 atggcttcag agattaaaga agccttaaag cacaagacag cagcaaaata ccttcagaaa
       61 gacaatttag agttcattcc aactcatgct tctcctgtac aatggggaga aatattttct
      121 gactcatcaa gtgcccagct caacttttcc ccaagcaaaa atggcttctc agcaaagcag
      181 gagctgcaaa aactctggca gatgtttaac tcatggttgc agccagaaaa acagagcaag
      241 gagcagatga tttctcaact ggtcttggag cagtttctcc tcactggaca ctgtaaagac
      301 aattttgtct tgaaagagat ttgggaagca agtggaagaa acatggggag attcttggag
      361 gggctgactg atgagtgctt gaagcctcct gccatggtct atgtctccat gcaaggactg
      421 gaagcccaat tttctgaaaa catgccatta aaagaagtca tcaagatttt ggaacaacag
      481 aaattagcaa cagggctaac accagagagc actcagatgc cggtacacat cgcagaagat
      541 atattattgg ccacaggaca agaaaacagt gaaaataaac acacttctgg gaattctact
      601 gaagtaaaca ttggtgatag cagtactgga catgagatga actcccttct tattatacag
      661 aaagagcagt gtcctgagca ggaagacgga ctcgattctt ttcaattcac tcagggtgcc
      721 agagcaagtc aaggcaactc cagtcatcat gtagagtttc tgagtgctca cacttggaga
      781 gatatcccca tggaggcaca accggtgatt ttctacagga caaacatctc tgaagacagg
      841 gaagagtgct gtaccacttc caagaatgct actcaagaaa atagtgctga taatattcct
      901 atgaggaaga tggattccgt cttcattaac cagagaatgt atcatcctga acctaaaatg
      961 ggagatgttt cttgtggggt tcctcagggt tttacaagaa gtcctggaac atccacaagc
     1021 caacaagagt cactggggct aactttttct gaagatgacc ctagggacat accaggggtc
     1081 ccctccaggc cagagaagct ttcatctgag gctgtacttc tttatcagaa tcaggaggca
     1141 aactcgacaa gtaaaagtca tcaaaagaga ttacatgtag gtcctaaaca gtacaattgt
     1201 gaagaatgtc ctaggacttt caaatatgcc agtcatcttt cactccacca gagaactcac
     1261 caaaataaga aggcatttgt ctgtcccacc tgtcagaaaa cattcaaaag agcctctgac
     1321 ctcagatgtc atgagatcat acacaatcca gagaaacctt tcaaatgtag cacatgcgaa
     1381 aagtccttca gccacaagac caacctgaag gctcatgaga ggattcacac aggagaaaag
     1441 ccttatgtct gttccctgtg tagccataga ttctgccaat catctacata taaccgtcac
     1501 ctgaggaatg tgcacaagtc tgactga
//
