LOCUS       NM_001400598            4197 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger and SCAN domain containing 26
            (Zscan26), transcript variant 1, mRNA.
ACCESSION   NM_001400598 XM_017600789
VERSION     NM_001400598.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4197)
  AUTHORS   Mesa,K., Gebelein,B., Cook,T. and Urrutia,R.
  TITLE     Identification and characterization of zinc finger encoding genes
            from the tumoral exocrine pancreatic cell line AR42J
  JOURNAL   Cancer Lett 103 (2), 143-149 (1996)
   PUBMED   8635150
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jan 25, 2022 this sequence version replaced XM_017600789.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.638966.1,
                                           SRR26360186.2141999.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-151               JAXUCZ010000017.1  47843822-47843972
            152-336             JAXUCZ010000017.1  47856633-47856817
            337-396             JAXUCZ010000017.1  47856924-47856983
            397-714             JAXUCZ010000017.1  47857741-47858058
            715-820             JAXUCZ010000017.1  47858330-47858435
            821-4197            JAXUCZ010000017.1  47860423-47863799
FEATURES             Location/Qualifiers
     source          1..4197
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..4197
                     /gene="Zscan26"
                     /gene_synonym="Azf8; Zfp187; Znf187"
                     /note="zinc finger and SCAN domain containing 26"
                     /db_xref="GeneID:266792"
                     /db_xref="RGD:727885"
     exon            1..151
                     /gene="Zscan26"
                     /gene_synonym="Azf8; Zfp187; Znf187"
                     /inference="alignment:Splign:2.1.0"
     exon            152..336
                     /gene="Zscan26"
                     /gene_synonym="Azf8; Zfp187; Znf187"
                     /inference="alignment:Splign:2.1.0"
     CDS             322..1719
                     /gene="Zscan26"
                     /gene_synonym="Azf8; Zfp187; Znf187"
                     /note="zinc finger protein 8; zinc finger protein 187"
                     /codon_start=1
                     /product="zinc finger and SCAN domain-containing protein
                     26"
                     /protein_id="NP_001387527.1"
                     /db_xref="GeneID:266792"
                     /db_xref="RGD:727885"
                     /translation="MALALIHPNKRAYSLAPLNLKEELQGFKVQGDRKGVGQEPLCKQ
                     FRQLRYEESTGPREVLRRLRELCRQWLRPETHSKEQILELLVLEQFLTILPRDLQVQV
                     LEHHPETGEDLVGILEDLQLDRGKAGEQKDSAQRTRPTVLVGEPAPHREAQEQPGFVV
                     LKPEERGKETRSENGKFTGGIDSCGRVESSCTMSEPIEAQCEDLSLKKYPAMPKGKTN
                     SQCLETKERLVQNSGLIERDRTHTGERSCESVVYQSSVATEHQEISKEKGHPCQECGK
                     VFQRSSHLIRHQKIHLGEKPYQCKECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNF
                     RRSSHLNRHQKIHSQDEPRECKECGKTFSRALLLTHHQRVHGRSKRHHCNECGKAFSL
                     TSDLIRHHRIHTGEKPFKCNVCQKAFRLNSHLDQHVRIHNEEKLYKCSECNEAFRQKS
                     GLFQHQRHHHKSKLA"
     exon            337..396
                     /gene="Zscan26"
                     /gene_synonym="Azf8; Zfp187; Znf187"
                     /inference="alignment:Splign:2.1.0"
     exon            397..714
                     /gene="Zscan26"
                     /gene_synonym="Azf8; Zfp187; Znf187"
                     /inference="alignment:Splign:2.1.0"
     exon            715..820
                     /gene="Zscan26"
                     /gene_synonym="Azf8; Zfp187; Znf187"
                     /inference="alignment:Splign:2.1.0"
     exon            821..4197
                     /gene="Zscan26"
                     /gene_synonym="Azf8; Zfp187; Znf187"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agacgtgaga ctgaccctgc ggccagggca ccaggactta cggtgatccg gttccagcgg
       61 agagagaaca gcaaacttgt gattcttgaa cggtggttct ggctggtaca cagaaacttc
      121 caaacctcgc agctgggaag accagaggct ggagtagctg ctttggagaa cacaaatggc
      181 tagaaggaaa caaccctcag gaaagatcac ttgttgctgt tgttactact agcacagctg
      241 tttctgtgac ttgtgttttt aggagtctct caggatacag tcaaaagaaa ggtctccaaa
      301 acaaagtgcc tgaagcaagg gatggcactg gccttgatcc accctaacaa gcgtgcatac
      361 tctttggctc ccctgaatct gaaggaggag cttcagggat tcaaagttca aggggacaga
      421 aaaggcgttg ggcaggagcc attgtgcaaa cagttcaggc agctgcgcta tgaggaaagc
      481 actggacctc gagaggtttt acgccgactc agggagctct gcagacagtg gctgcggcct
      541 gagacccaca gcaaggagca gatcctggag ctgctggtac tggagcagtt cttgaccatc
      601 ctgccaagag atctgcaggt ccaggtgctc gagcaccacc cagagactgg ggaggacctg
      661 gtgggaatac tggaagattt gcagctggat cgtggaaaag cgggagagca gaaggactca
      721 gcccaaagaa ccagaccgac tgtgctggtt ggagagccag cccctcatag agaagcacag
      781 gagcaaccgg ggtttgtggt tctgaagcct gaggagagag gtaaagagac aaggagtgag
      841 aatgggaagt tcactggagg gatagactct tgtggaagag tggaatcatc ctgtacaatg
      901 tctgaaccca tcgaggccca gtgtgaggac ctgagcttga aaaagtatcc agccatgccc
      961 aaaggaaaaa ctaacagtca atgcttagaa actaaggaga gacttgttca gaactcaggc
     1021 ctgattgaac gtgacagaac gcatacagga gaaaggtcct gtgaatctgt agtgtatcag
     1081 agttctgttg ctactgaaca tcaggaaatc tctaaagaga aaggtcaccc ctgccaagag
     1141 tgtgggaaag tctttcagag aagttcacac ctcatcagac atcagaaaat ccatcttggt
     1201 gagaagcctt accagtgcaa agagtgtgga aaagtcttta gccagaatgc aggtcttttg
     1261 gagcatctca ggatccatac tggagaaaaa ccctatctgt gtatccattg tggaaagaac
     1321 ttcaggcgaa gctctcatct taatagacat caaaaaattc acagtcagga tgagccccga
     1381 gaatgcaagg agtgtgggaa aacctttagt cgggccctcc tcctcaccca ccatcagaga
     1441 gtccatggtc gttccaaaag acatcattgt aatgagtgtg ggaaagcctt cagtttgacc
     1501 tctgacctta ttcgacatca caggattcac actggagaaa aacctttcaa atgtaatgtg
     1561 tgtcagaaag ctttccgtct aaattcacac ctagatcagc acgtcagaat ccacaatgaa
     1621 gaaaaactct acaagtgtag tgaatgcaat gaagccttca ggcagaagtc tggtctcttt
     1681 cagcatcagc gacatcacca taaaagtaaa ctggcttgat gaggttcttt gaaatatcgg
     1741 gatgttacat tgataagcaa acagtgcttt aaacaccagg gcttcagtat tcttggaagc
     1801 catttgcctc cattgtttcc ctctcttgac tttactgaaa gtcataatta attagactat
     1861 aataatttta ccctaagagt ggaatcagag ttaaacaagt attcactaca gaacttctca
     1921 gatctttgga tgtgataagt acacgatcat ttatctctta agtattagct ttatgtatga
     1981 atgaagtttt ttaaatcagc aagtcaagtg cctataggtt tatacagaac aagatcaagc
     2041 tgatattttt gcaagtactg taacagcagg ctcctaaaaa ataaaagagc tggggagatg
     2101 gctcaatggt taatccaagt tgctatgcaa atgtaaggac tgttttagat ccccagcacc
     2161 catgttgaag tctaatgagt atagtggcca gcctgtggcc tgtggttcca ctcctcaggt
     2221 ggcagaaatg ggatctttag agcaagctgg ctagccagac tagctattag caaacttaga
     2281 attcaggtgg gagagtttgg agagcagttg gagttatcga gaaagactcc tgatgataat
     2341 ctaagtacac atgtatccat acacttttac agccatacat gcaaacatca tacatgtgaa
     2401 aagaaaaacc taaggagcta gagtgatgag tcagcagtta acacatctgc tcttgcagag
     2461 gacccgtagc gtttttaatt cctaacacct ccatatcata gcagctcaca accacctgta
     2521 accccagttc cagggatctg atgccctctt ctggccttct caggttccta tacacagtgg
     2581 tccacagaaa ctggtggaca cacctagaaa actggtaaaa tatttttagg cccaaaatta
     2641 ataatgcttg gaaatataca ttctcaagag tttaatatag gttgaacatt ttccctattg
     2701 agtccacaca cacactggct tcatatcctc tttacccttg taccatcaat gaacacattt
     2761 ctgaaagcaa agatagcttt tgctgtttaa ctatagaacc tagccttagg attagctcat
     2821 gtcaatttac attccctacc catttgaacc atggtatcac agtttttcaa attataaatc
     2881 aagttttact taaactatgc aagagacttt gagtcacttg atgaatgaac tgtgttgaat
     2941 tattctaagc aacaacttgc ttactgggca gtgccagtac agtgaccact tgaaggatac
     3001 ttcttaataa atgtcccata agggaaaatg ctttctttcc ctttgatacc aatgatgaaa
     3061 atttaaatga tacttatttt gaaatcattt tgaccattaa aatcaaatca gcttggagag
     3121 atggtcatgg tcttcatgcc gtattgactg tctcgctagt gatgaaaagt agtaagcttg
     3181 gagccttccc aagcgcatca ccagactgct aaagcatagt ttatggttgg gaattgcaca
     3241 gggtgtactt ctccaagaca agggcttctt aaggtatgcc gatttggcaa gataagagga
     3301 cccttgtagt gattacgact tggttttact acacttggct tacaaataaa tagcgactta
     3361 gaagagctta tttttcttgt ccgatagaaa aggatagagt cagtccaaca cagatctgtg
     3421 gtatcactag atctgaatct agtcaacttg ctgccagtca catctaaaag gggacagacc
     3481 aaggactgtt aggcaaaatt ctaacattaa tcttcacttt catccccctt tagccaaact
     3541 tttagctctg cacagagtaa gaccctcctc tttgtcaaga tttttgccct aagatcaagg
     3601 ggctggcaga accaagaaga accttttttt gaccatacct tgatgtgatg gttgcacctt
     3661 tagcagtcat atggccttaa aaactgacag catggactat ggtcctcaac actaccaaaa
     3721 taacagtgtt agcatgcgat cagtctcctt gatggttagc tcatgtccat gccagaatgt
     3781 gcatgtaaca ggcatttgta acacttgtaa ttcctaaacc tcagaagaaa gcacctgttt
     3841 agtacaggct ttatatttct actgttgaac atacttttat gcattgatta atcacgtatc
     3901 tatcactgtg taaaagtgat gtcttttctg gcctttctcc ttttattcct aaacagcatg
     3961 gtccttaaaa attagagaac tatcaaattt ttaaatgcac attacttttt gtcagtttgt
     4021 gtgtgtagta tttacccaac aaatatattt aaagcaatgt aaaaacataa ttatcgatag
     4081 tgtaaagaaa atacttttct atagaaatag tgatattgac agtattgtaa acagtctgta
     4141 aagagttaat gaagttttga agtaattttt gaataaaatt aaaactttaa aaagaaa
//
