LOCUS       NM_001108851            1849 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger and SCAN domain containing 25
            (Zscan25), mRNA.
ACCESSION   NM_001108851 XM_001061809 XM_344076
VERSION     NM_001108851.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474012.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_344076.3, XM_001061809.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132293,
                              SAMN16093042 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p11"
     gene            1..1849
                     /gene="Zscan25"
                     /gene_synonym="Zfp498; Znf498"
                     /note="zinc finger and SCAN domain containing 25"
                     /db_xref="GeneID:363872"
                     /db_xref="RGD:1308619"
     exon            1..103
                     /gene="Zscan25"
                     /gene_synonym="Zfp498; Znf498"
                     /inference="alignment:Splign:2.1.0"
     exon            104..532
                     /gene="Zscan25"
                     /gene_synonym="Zfp498; Znf498"
                     /inference="alignment:Splign:2.1.0"
     CDS             149..1780
                     /gene="Zscan25"
                     /gene_synonym="Zfp498; Znf498"
                     /note="zinc finger protein 498; zinc finger and SCAN
                     domain-containing protein 25 pseudogene"
                     /codon_start=1
                     /product="zinc finger and SCAN domain-containing protein
                     25"
                     /protein_id="NP_001102321.1"
                     /db_xref="GeneID:363872"
                     /db_xref="RGD:1308619"
                     /translation="MLKERLEMAEDPQQQMGAPVVKLEKELPWGRGGEDSSPEAFRLR
                     FRQFRYQEAAGPQEALRELQELCRRWLRPELHTKEQILELLVLEQFLTILPRELYTWI
                     REHSPDSGKALVAMVEELMGSTEAKAVPCHAQGEQLVTALGGGSWQSGIHLGPVEVKP
                     EWGIPQGEGVQSLGPSTAEQLSQGPGDGTQAFQEQALPILHVGSGLPTVSARDQEIAA
                     GFLAATSQGLGPFKDMTLGFPEEEWRHVAPAQIDCFGEYVDSQDCGAPPGAGSKEKEA
                     KPQQEDLKRAFVGLTSDGFGEAAIQVPVPGGTCEQEPGGSGTSVPGLPAPQPGVPLPE
                     ALSAHSSFWKPFQCPECGKGFSRSSNLVRHQRTHEEEKAFGCVECGKGFTLREYLTKH
                     QRTHLGKRPYVCGECWKTFSQRHHLEVHQRSHTGEKPYKCADCWKGFSRRQHLLVHRR
                     THTGEKPYTCECGKSFSRNANLAVHRRAHTGEKPYGCQVCGKRFSKGERLVRHQRIHT
                     GEKPYHCPACGRSFNQRSILNRHQKTQHRQEPPVQ"
     exon            533..734
                     /gene="Zscan25"
                     /gene_synonym="Zfp498; Znf498"
                     /inference="alignment:Splign:2.1.0"
     exon            735..826
                     /gene="Zscan25"
                     /gene_synonym="Zfp498; Znf498"
                     /inference="alignment:Splign:2.1.0"
     exon            827..950
                     /gene="Zscan25"
                     /gene_synonym="Zfp498; Znf498"
                     /inference="alignment:Splign:2.1.0"
     exon            951..1849
                     /gene="Zscan25"
                     /gene_synonym="Zfp498; Znf498"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgggtc cgggcggggc ggggctggac ggagcaggca gcaggtcggt ggggcagcag
       61 cggctgcgaa ggtcgttatc tcctcgcaca gccgtgatct tagacgggtc acccctgttg
      121 ttgtcctcag tcgtgctgga gcttgaagat gctgaaagag cgtctggaga tggccgaaga
      181 tcctcagcag cagatgggtg ctccagtggt caaactggag aaggagctgc catggggcag
      241 gggaggggag gactctagtc ctgaggcttt tcggctaagg tttcggcagt tccgctacca
      301 agaggctgct ggtccccagg aagccctcag ggagctccaa gagctgtgtc gacggtggct
      361 gaggcctgag ctgcacacca aagagcagat cctggagctg ctggtgctgg agcagttcct
      421 caccatcctg ccccgagagc tctacacctg gatccgggaa cacagcccag acagtggcaa
      481 ggctctggtg gccatggtgg aggagctgat ggggagcacg gaggccaagg cggttccatg
      541 ccatgcccag ggagaacagc tggtcacagc cctgggcgga ggatcttggc aatcaggtat
      601 ccacttgggg ccagtagaag tcaagcctga gtgggggatc cctcagggtg aaggagttca
      661 gagcttaggc ccaagcaccg cagaacagct gagccagggc cctggagatg ggacacaggc
      721 cttccaggag caagcattgc ccattcttca cgtgggttca gggcttccca ctgtgagtgc
      781 cagagaccaa gagattgcag ctgggttcct tgcagccacg tcccagggtc tggggccatt
      841 taaagacatg actttgggtt tccctgagga ggagtggagg cacgtagccc cggcacagat
      901 tgactgcttt ggggaatatg tggactctca ggactgtggc gcccctccag gtgctgggag
      961 caaggagaag gaggctaagc cccagcaaga agacctgaag agagcatttg ttgggttgac
     1021 ttccgatggg tttggagaag ctgccatcca ggttcctgtg ccagggggca cctgtgagca
     1081 ggagcctggg ggctctggga ccagtgtgcc tgggcttcct gctcctcagc ctggcgtccc
     1141 cctgcctgag gccctcagcg cccacagttc tttctggaag ccattccagt gccctgagtg
     1201 tgggaaaggc ttcagtcgga gctccaacct tgtcaggcac cagcggaccc acgaggaaga
     1261 gaaagccttt ggctgtgtgg agtgcgggaa aggtttcacc ttaagggaat acctcaccaa
     1321 gcatcagagg acccacctgg gcaagaggcc ctacgtgtgc ggagagtgct ggaagacctt
     1381 cagtcagagg catcacctgg aggtgcacca gcgcagccac accggggaga agccctacaa
     1441 gtgtgcagac tgctggaagg gcttcagccg gaggcagcat ttgctggtgc accgcaggac
     1501 acacaccggg gagaagccct acacctgcga gtgtggcaag agcttcagca ggaacgccaa
     1561 cctggccgtg caccgtcgcg cgcacacagg ggagaagccc tacggctgcc aggtgtgcgg
     1621 caagcgcttc agcaaggggg agcgactggt gcggcaccag aggatccaca caggcgagaa
     1681 gccctatcac tgcccagcct gcggccgcag cttcaaccag aggtccatcc ttaaccgtca
     1741 tcagaagacc cagcatcgcc aggagcctcc agtgcagtga gcctaccaag ggagcagctc
     1801 tgccgtagga gcgactgtgt tgcaccgagg ctctgggcag tgcccagtg
//
