LOCUS       XM_217612               3485 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger (CCCH type), RNA binding
            motif and serine/arginine rich 2 (Zrsr2), transcript variant X1,
            mRNA.
ACCESSION   XM_217612
VERSION     XM_217612.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 17, 2024 this sequence was replaced by
            NM_001427289.1.
            
            On Jan 21, 2021 this sequence version replaced XM_217612.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3485
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3485
                     /gene="Zrsr2"
                     /note="zinc finger (CCCH type), RNA binding motif and
                     serine/arginine rich 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 ESTs, 2 long SRA
                     reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 163
                     samples with support for all annotated introns"
                     /db_xref="GeneID:302670"
                     /db_xref="RGD:1559763"
     CDS             368..1993
                     /gene="Zrsr2"
                     /codon_start=1
                     /product="U2 small nuclear ribonucleoprotein auxiliary
                     factor 35 kDa subunit-related protein 2"
                     /protein_id="XP_217612.5"
                     /db_xref="GeneID:302670"
                     /db_xref="RGD:1559763"
                     /translation="MEVVGPTAVPQKLSRKKYMALRKKEKRKKRRQELARLRDAELSQ
                     KEEEEDPLGEEKRLEEERLLEAERQRLHEEWLLREEKAQEEFRAKKRKEEAARKRKEE
                     LERKLKAEWEEQQRKEREEEEQKQQEKREREEAAQKRLDQAENELENGGTWQNPEPPT
                     DIRVLEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDD
                     YDPDSSLEYSEEETYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQS
                     EEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFRN
                     PNNEYREANRDIYLSPDWTSSSFAKSSERRERASHYDEYYGRSRRRRSPSPGLSYKRN
                     GESDRKSSSNHRVKKSHKHGMKNRERHSSRSRRRKRDHSLGPWSQSRRSRHSRSRSHS
                     QSRSRSSSRSRSCGRGRGWSHSRSHSRSRKRSRNRSRSRSRNRNRNRNRKRNQSRSWS
                     HSHSHSRSSSRSRSPGRRRSGSRDKTTQSPKSK"
ORIGIN      
        1 gccttagcgc cttgaattct gggcaagggg tggtgctaag gcagccggga ggtcctgagg
       61 agcagaggcc ggagtttccg gtggtggaag agctcgggtg gccgctttgg tgaggagatc
      121 tttcctcagg ccatggtacc tggctgacta gctgaggcag gaaacctccc tctttccttc
      181 tccggtccgc cgtggtgact gcggcggctt cattgagtgt atattttctc aggcctggct
      241 gcctggctga ctagctgcag gaagaaagcc ccttccttcg gtctcgggcc ggtcctggtg
      301 gctgcgctga gtgggctccc gaacaccagg gaggctgctt ccactcagag gagacagcga
      361 cggcagtatg gaggtggtgg ggcctaccgc ggttccacag aaactgagcc gtaagaagta
      421 catggctctc cggaagaagg agaaacgtaa gaaacgacgg caggagcttg ctcgtctgag
      481 agatgcagaa ctgtcacaga aagaagagga agaagatcct cttggtgaag aaaaacgatt
      541 agaagaagaa aggttgttgg aggcagagag gcaaagatta catgaagaat ggttgctgag
      601 ggaagagaag gcacaagaag aattcagggc aaagaagaga aaagaagagg cagctcgaaa
      661 acggaaggaa gaactagaga gaaagttaaa ggcagaatgg gaagaacaac agagaaaaga
      721 acgagaggaa gaggagcaga aacaacaaga gaagagagaa agagaggaag ctgcgcagaa
      781 gaggctggat caggctgaaa atgagttgga aaatggtggc acctggcaga acccagaacc
      841 gcccacggat ataagagtac tggagaaaga tcgagccaac tgtccattct acagtaaaac
      901 aggagcttgc agatttggag ataggtgttc acgtaaacac aactttccca catcaagtcc
      961 caccttgctg attaagagca tgtttacaac gtttggaatg gagcagtgca ggagggatga
     1021 ctatgaccct gactcaagcc tagaatacag tgaagaagag acctaccaac agttcctaga
     1081 cttctattat gatgtcctgc ctgagttcaa gagtgtgggg aaagtgattc agtttaaggt
     1141 tagctgcaac ttggaacctc atctgagggg caatgtatat gttcagtacc agtcggaaga
     1201 agactgtcaa gcagcttttt ctgtttttaa tggacgatgg tatgcaggac gacagcttca
     1261 gtgtgaattc tgcccagtga cccggtggaa aatggcaatt tgtggcttat ttgaagtaca
     1321 gcagtgtcca agaggaaagc actgcaactt tcttcacgtg ttcagaaatc ccaacaatga
     1381 atatagggaa gctaatagag acatctacct gtctccagat tggaccagct cctcctttgc
     1441 taagagttca gagaggaggg aaagggccag tcactatgat gaatactatg gcaggtcaag
     1501 aagaaggagg agtccgagtc cgggcctctc ctacaagaga aatggtgagt ctgacaggaa
     1561 gagcagtagt aatcacaggg tgaagaaatc tcacaaacat ggaatgaaga atcgtgagag
     1621 gcacagttct cggagtagaa gaagaaaaag agatcacagt ctaggcccct ggagccagag
     1681 caggaggagc cgccatagca ggagccgcag tcacagtcag agccgcagca ggagcagcag
     1741 ccggagccgc agctgtggcc gtggccgtgg ctggagccac agccgtagcc acagcagaag
     1801 ccggaaacga agccggaatc ggagccggag ccggagccgg aaccggaacc ggaaccggaa
     1861 ccggaaacgc aatcagagca ggagttggag ccatagccat agccatagcc ggagctcatc
     1921 aaggtccaga agtcctggca ggaggaggtc aggtagtaga gacaaaacca cccagagtcc
     1981 caaatctaaa taaacttggt tgtttttaaa catgtctctt ttttttttat ggcagctact
     2041 cacctgtata gactgatgat gctacccaaa tgctatgtaa atcatacttt ttgataaatt
     2101 atacacacac acataaaatt atttgtaacc ctaatcttga gaacatcagt taatgctgcc
     2161 ttgcccgccc ccctcctctc tatctgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgta
     2221 agtgtaccat aacaagtgtg gtacttttag aggtcagtta cacagtggga tctagggatt
     2281 gaactgaagt catgaagctt ttacaccaag gacctttact cactgagaca tcttgccagc
     2341 ccaccttttt tcttaggagt ccataccctt tatttttgct ttatgcatat gggtattttg
     2401 cccgcatgta gctatgtgta ccatttgtga acctagcgcc catggaggcc agaagagttt
     2461 gtcagatcca ctggactgga gttatagatg gttgtgagct gtcatgtggg tcctgagact
     2521 tgaacccaga tcctctagaa gggctcttaa ccactgagcc atctttccag cctgacatac
     2581 tttatttttt aattcaaagg ttgcatatag ctttgatatt ttcactcaat tgtctcattt
     2641 cattaatctg attcttaagt tccaaaattc ttatttttat gtactacata gagtaagtgc
     2701 atctaccagt ggatttgaca atgttccagt tgttgggttt ttaaaggtga ccctcttaga
     2761 tttccttaat gatttcttag aataaactat atcaagaaag gtaatctaaa tttcctttca
     2821 ggaagactat aaaaaaaaag tcactttaac cttatagctc ccacagcata gaattattac
     2881 tttgatattt gctagcttgg caggttttag gtattgaagt gcttgttttt attatcacta
     2941 ttttttttta cttaccattt ttcctattaa aatattgtat tttatctttt ctatatgtac
     3001 aagttgattt ttctcctcta aaacttattt cttgtttcaa agtgttgaag tacccatttc
     3061 tatacttctc tttccccata tctagagttc tgccctctcc tggggtctgt caggttacat
     3121 cttgaatagt gtgttgtgaa agatttttat agaggtaaag gagtttgtca tttcccagaa
     3181 aattagagtt gtcgtcgttg aacacatccg ctgttaaaac tgcccttgtg taacaatcat
     3241 gagtggtcag tgaagagaag tgagtgtagg cttatgtgca ttattcttgc tttcctagat
     3301 gcttctcctt ctcagacttt cactgtcatg ctttgggcct cgaaatttgc atggcattta
     3361 gcaatctgac atttgagaat tcactaaaga tgcatacaag gcttatgcca gtattccctg
     3421 cacttgggag gctgatgcta gagtgaggcc ctacctcatt tttcaaaaaa aaaaaaaaaa
     3481 aaaaa
//
