LOCUS       XM_039088739            3426 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zona pellucida-like domain containing
            1 (Zpld1), mRNA.
ACCESSION   XM_039088739
VERSION     XM_039088739.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039088739.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3426
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3426
                     /gene="Zpld1"
                     /note="zona pellucida-like domain containing 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 5 Proteins, and 95% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:363768"
                     /db_xref="RGD:1308138"
     CDS             9..1256
                     /gene="Zpld1"
                     /codon_start=1
                     /product="zona pellucida-like domain-containing protein 1"
                     /protein_id="XP_038944667.1"
                     /db_xref="GeneID:363768"
                     /db_xref="RGD:1308138"
                     /translation="MEQIWLLLLLAIRVFPGSAQFNSYNCDANLHSRFPAERDISVYC
                     GVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINNNTFPAVVIFIINLSTLE
                     GCGNNLVVSTIPGVGASGNATSVQIGNISGYIDTPDPPTVISYLPGLLYKFSCSYPLE
                     YLVNNTQLASSSAAISVRENNGTFVSTLNLLLYNDSTYREQLIIPSIGLPLKTKVFAA
                     VQATNLDGRWNVLMDYCYTTPSGNPNDETRYDLFLSCDKDPQTTVIENGRSQRGRFSF
                     EVFRFVKHKNQKMSTVFLHCLTKLCRADDCPLLMPICGNRKRRDAQSWTTWAPQSTSG
                     NAVLSAGPIITRSDETPTNNSQLGSLSVPPFQLNAVTSSLISGMVILGVMCFSLLLCS
                     LALLHRKGSTSLVLNGVRNPVFE"
ORIGIN      
        1 ttgttgccat ggaacaaata tggttgcttc tccttctagc aattagagtg tttccagggt
       61 ctgctcagtt caacagttac aactgtgatg ccaacctcca cagcagattt cctgctgaaa
      121 gagacatcag tgtctactgt ggagtgcagg ccattacgat gaagattaat ttttgcacgg
      181 tcctcttctc gggatattct gaaacagatc tggcactgaa tggaaggcat ggggattccc
      241 actgcagggg cttcatcaat aacaacacct ttccagcagt ggtcattttc atcattaatc
      301 tcagcacctt ggagggttgt ggaaacaatt tagtggtgtc tacaattcct ggtgtaggtg
      361 cttctggaaa tgcaacctca gtacagatag gaaatatttc cggatatatt gatactccag
      421 acccgccaac agttatcagt tatcttcctg ggctccttta caaatttagt tgtagttatc
      481 cattggaata cctggttaat aacacccagc ttgcttcgtc ctcagctgct atttctgtga
      541 gagagaacaa tgggacattt gtcagcactt tgaacttgct cctttataac gattcaacct
      601 acagagagca attaattatc ccgagtatag gattaccctt gaaaactaaa gtgtttgcag
      661 ctgtgcaagc tactaatctg gatggcagat ggaatgtatt aatggattat tgctacacaa
      721 ccccatctgg gaatccaaat gatgagactc gttatgatct cttccttagc tgtgacaaag
      781 atcctcagac taccgtcatc gaaaatggca gaagccagag gggccggttt tcctttgaag
      841 tcttccgttt tgtgaaacac aagaatcaga aaatgtccac tgtctttctg cactgcctca
      901 cgaagctctg cagagcggac gactgtcctc tcctcatgcc gatttgtggc aacagaaaaa
      961 ggagagatgc tcagagctgg acgacttggg ccccgcagag cacttctgga aacgcggtcc
     1021 tctctgcggg accgatcatc acccggagcg atgagactcc aaccaacaat tcacagcttg
     1081 gttccttgag tgtgcctccc tttcagctga atgccgtcac cagctctctg atatcaggaa
     1141 tggtcattct gggagtcatg tgcttttctc tcctactgtg ctcactagcc cttctgcaca
     1201 gaaagggatc caccagcttg gttttgaatg gtgtaagaaa ccctgtcttt gagtgacagt
     1261 gactgttcct gctctaggac gaaggtcact gatcactctg tgcgactgtg gtcagccatc
     1321 catctgagtt caatgacagc aacacttgat atttttaggt taggtagatt tctttttgta
     1381 gctcatgagt gctaagatag tgaaagacta ttgatggtat ggctacgcca cctatgtaag
     1441 tggccaaccc cattttctta ccatcaaagg gcacattgac aataactaaa aatattcagg
     1501 acttagacct taaaaggtca gtcatttttc agttcatttg taatttctgt tgactgttgg
     1561 tataagaggt caatttaacc acagaggaaa aaaagaattt gttccatttt cttccaagca
     1621 gtaaagccca atgagtgatt ttaaattgtg tatgtggtcc aaaaatgaaa gttacctttt
     1681 gtttttttta actccaggta attccagctt aaggctacat tttaaaggga cattttgagt
     1741 taactactat ttctcctgat ctcttgtgtc atggattgat gtttaatcct gatgacattt
     1801 gtttaaaaaa aaaacaaaac tacaaataca cttggaaaaa aatctattca catagcaaat
     1861 agtaaaagtg ggtttttaat gtccaaagga tgcattgtat gttatcaaat tatttctttg
     1921 aatagggatg gctgtgaggc ctcatcctgg ttcatgtggg accattggca cagggtaact
     1981 cacctggcag ttaaacattc agcttccatg tatctagcat caaggccact gtgggaaggt
     2041 tattcacaag tcattatgtg agaagcagac actgacagca ccatagaagc atgatgctcc
     2101 cattagggtt tcccagaaga ccagtattct ttatatccta gaacaaagag gaactgcaga
     2161 gtaagtgttg tttgtagaac attttaggag ccaacatgaa gaagatggtc ctttgtccta
     2221 aacattttat gagaaatggg gaaatgaatg gttgaaaggg gctttttttt aagatgtcat
     2281 ttttctagag gctatactca ctacacaatg aacaatagat ttacccagta ctaaacagtg
     2341 agagcaatta tcctttatca tctttccaaa acgataatat ttaatccaat ttttaaacaa
     2401 gtcatgttca acacaaaagc aaaaaaaaaa tagattcaaa ttatttccac aactggacaa
     2461 gtaaaagaac ccaatggtgt ataccaaagt tcagtatgtg cagctcctgg tagtgctgta
     2521 ttaactgtag aaatttgatg tcatgacact gtgatccact attcaggaca gattttaata
     2581 tgccatatgt aaatcaatat gcaattttag atctgcttca agtggaatat gtacactgca
     2641 aattaatata ataattaaat caatcaccaa gttaaaagac taccctttct ccaatttgct
     2701 tgaatatttc aggagcaagt gtttatatta caataattag ctatctaatt acctcaactc
     2761 ttctatttca aggtgggtgg catgaagtga aatagaacct gaaggaagaa atcctggata
     2821 atttcttcaa tattaaacaa aaattaagcc acttaaaaag tcaatctccc ctttcattct
     2881 gacctccttc tgtggtaaca cgattaactg atcatcacac cataggactc tctgtgtatg
     2941 tggacagtac tgaaatactg tggcgaatct aagtctatgt tttccttggg tgaatagtgg
     3001 ttcaagctta aactctggga ctagcactgt agatcacgga ggctgacttt tctgtttgaa
     3061 ttcttcgcct ttggatggtt agtgcttcct cttttgtcca ttaaatccta cactttattg
     3121 cacagaacta aataatcaac atacagcatt ttggaaacac ctcaagccta gtgtgtcctt
     3181 tggctgcccc ttttatcatg agcaagagaa gcaaagctat aagcgggttt gcttcagtca
     3241 gctttaccct gtaatactca aactgtaggt tctgttttag ttactctgag tttttttggt
     3301 tattgtagta ggaagacctt acaaatatgt gcaaatgtct tttcagtttt aatacctcaa
     3361 actgtttttt tttgtgcttc aggggtaagg tctgatgaca tgtacaaaat taataaaaaa
     3421 taattt
//
