LOCUS       NM_001395156             998 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus ZNRD1 antisense RNA 1 (Znrd1as1), mRNA.
ACCESSION   NM_001395156
VERSION     NM_001395156.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 998)
  AUTHORS   Hurt,P., Walter,L., Sudbrak,R., Klages,S., Muller,I., Shiina,T.,
            Inoko,H., Lehrach,H., Gunther,E., Reinhardt,R. and Himmelbauer,H.
  TITLE     The genomic sequence and comparative analysis of the rat major
            histocompatibility complex
  JOURNAL   Genome Res 14 (4), 631-639 (2004)
   PUBMED   15060004
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000020.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ214505.1, SRR26360194.2326809.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-124               JAXUCZ010000020.1  1599935-1600058     c
            125-200             JAXUCZ010000020.1  1595158-1595233     c
            201-998             JAXUCZ010000020.1  1593911-1594708     c
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..998
                     /gene="Znrd1as1"
                     /gene_synonym="RGD1564067; Tcte4; Tctex4; Znrd1as"
                     /note="ZNRD1 antisense RNA 1"
                     /db_xref="GeneID:499401"
                     /db_xref="RGD:1564067"
     exon            1..124
                     /gene="Znrd1as1"
                     /gene_synonym="RGD1564067; Tcte4; Tctex4; Znrd1as"
                     /inference="alignment:Splign:2.1.0"
     CDS             105..977
                     /gene="Znrd1as1"
                     /gene_synonym="RGD1564067; Tcte4; Tctex4; Znrd1as"
                     /note="t-complex testis-expressed 4; t-complex-associated
                     testis expressed 4"
                     /codon_start=1
                     /product="ZNRD1 antisense RNA 1"
                     /protein_id="NP_001382085.1"
                     /db_xref="GeneID:499401"
                     /db_xref="RGD:1564067"
                     /translation="MTSTKLRLAWAKESKDPRISEGQRSPLEKRILRFGGVHTTAARH
                     LLTQKYHEESKALCKEQAHSLDYWLAKAESYYNKRIVDMMKKDTGGETKTKVEEEPPP
                     PPPPPPPRTEKQKQHYWVPEREKKQIERHIHRTSQAREFKDKPWKQTQLLSEITLPKI
                     MLERQSIPKAQKIRQAHERELLQIKDHRERMIRGRELLQQRLKERTLRKSLSQIPLPE
                     KHDQVKKQSKEFERVVAYPLFQPSSTSRIKVDILMEKSQDEEDLSTIIRPFGRRFLAV
                     PPFLRTQIGKIKNP"
     exon            125..200
                     /gene="Znrd1as1"
                     /gene_synonym="RGD1564067; Tcte4; Tctex4; Znrd1as"
                     /inference="alignment:Splign:2.1.0"
     exon            201..998
                     /gene="Znrd1as1"
                     /gene_synonym="RGD1564067; Tcte4; Tctex4; Znrd1as"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggtcgtgac gtcataatta atggcgcagg tactcgaggc cgcttaaggg aaggagccga
       61 acctctggcg gaagggaata tacggcggca cgcagtctgg gactatgacg tcgaccaagt
      121 taagattggc ttgggcaaaa gaatccaaag accctaggat ctcagaaggt caacggtctc
      181 ctctagagaa aaggatcctg aggtttggtg gtgtgcatac aacagcagcg agacacttgc
      241 taactcagaa gtaccatgag gagagcaaag cactctgcaa ggagcaagct cattctcttg
      301 actactggct tgcaaaagca gagtcatatt ataataaaag aatagttgac atgatgaaaa
      361 aagacacagg tggtgaaaca aagacaaaag tggaagagga gccaccacca ccaccaccac
      421 caccaccacc acgtacagag aaacagaagc aacattattg ggtacctgag agagagaaga
      481 agcaaataga aaggcacatc catagaacaa gccaggccag agaatttaag gacaaaccct
      541 ggaaacagac acaactcctc agtgaaataa cactacccaa aattatgcta gagaggcaga
      601 gcatcccaaa ggctcagaaa ataagacagg cacatgagag agaactgctc caaattaaag
      661 atcatcggga gcgaatgatt cgaggaaggg aacttctaca acaaaggctc aaagaaagaa
      721 ccttgagaaa aagcctgagc cagatcccac ttcctgagaa gcatgatcaa gtaaagaaac
      781 agagtaaaga gtttgagagg gtagttgcat acccactttt ccagccatcc agtaccagtc
      841 gaattaaagt ggatattctt atggaaaaat ctcaggacga agaggacttg agcacaatca
      901 taagaccttt tggaaggaga ttcttagctg taccaccttt tctgagaaca caaataggaa
      961 aaataaagaa tccataaagt ttcagagctt tgctggca
//
