LOCUS       NM_001271350             893 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger, HIT-type containing 1 (Znhit1),
            mRNA.
ACCESSION   NM_001271350 XM_002727957 XM_003751158 XM_003752602
VERSION     NM_001271350.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Beckerman,R. and Prives,C.
  TITLE     Transcriptional regulation by p53
  JOURNAL   Cold Spring Harb Perspect Biol 2 (8), a000935 (2010)
   PUBMED   20679336
  REMARK    Review article
REFERENCE   2  (bases 1 to 893)
  AUTHORS   Watanabe,S. and Peterson,C.L.
  TITLE     The INO80 family of chromatin-remodeling enzymes: regulators of
            histone variant dynamics
  JOURNAL   Cold Spring Harb Symp Quant Biol 75, 35-42 (2010)
   PUBMED   21502417
  REMARK    Review article
REFERENCE   3  (bases 1 to 893)
  AUTHORS   Yang,Z., Cao,Y., Zhu,X., Huang,Y., Ding,Y. and Liu,X.
  TITLE     Znhit1 causes cell cycle arrest and down-regulates CDK6 expression
  JOURNAL   Biochem Biophys Res Commun 386 (1), 146-152 (2009)
   PUBMED   19501046
REFERENCE   4  (bases 1 to 893)
  AUTHORS   Wang,J., Li,Y., Zhang,M., Liu,Z., Wu,C., Yuan,H., Li,Y.Y., Zhao,X.
            and Lu,H.
  TITLE     A zinc finger HIT domain-containing protein, ZNHIT-1, interacts
            with orphan nuclear hormone receptor Rev-erbbeta and removes
            Rev-erbbeta-induced inhibition of apoCIII transcription
  JOURNAL   FEBS J 274 (20), 5370-5381 (2007)
   PUBMED   17892483
REFERENCE   5  (bases 1 to 893)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On or before Sep 19, 2012 this sequence version replaced
            XM_002727957.2, XM_003752602.1, XM_003751158.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22399489.4070385.1,
                                           SRR22399492.636898.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-250               JAXUCZ010000012.1  25323292-25323541
            251-421             JAXUCZ010000012.1  25326356-25326526
            422-501             JAXUCZ010000012.1  25328811-25328890
            502-671             JAXUCZ010000012.1  25329018-25329187
            672-893             JAXUCZ010000012.1  25329345-25329566
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q12"
     gene            1..893
                     /gene="Znhit1"
                     /note="zinc finger, HIT-type containing 1"
                     /db_xref="GeneID:100360077"
                     /db_xref="RGD:2322870"
     exon            1..250
                     /gene="Znhit1"
                     /inference="alignment:Splign:2.1.0"
     CDS             232..693
                     /gene="Znhit1"
                     /note="zinc finger, HIT domain containing 1"
                     /codon_start=1
                     /product="zinc finger HIT domain-containing protein 1"
                     /protein_id="NP_001258279.1"
                     /db_xref="GeneID:100360077"
                     /db_xref="RGD:2322870"
                     /translation="MQTARQVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPH
                     AGLPQLGKRLPQFDDDADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSASEGPNYLT
                     ACAGPPSRPQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV"
     exon            251..421
                     /gene="Znhit1"
                     /inference="alignment:Splign:2.1.0"
     exon            422..501
                     /gene="Znhit1"
                     /inference="alignment:Splign:2.1.0"
     exon            502..671
                     /gene="Znhit1"
                     /inference="alignment:Splign:2.1.0"
     exon            672..893
                     /gene="Znhit1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagcagcag caggagcagg agcaaaagcc ggggttccgg gactgacgct gccatggcta
       61 gcagcacgct taggctacac ccaggcccgc accagggctg agcttagcgc ctagattccg
      121 agtccccagg aagattctgg gaaagggaag ccgagcccgc tgagaggagg agctgtgctc
      181 cggactccgc cctggaaaaa aggcgtaacc cgaggccacc taaaacccga gatgcagacg
      241 gcgagacaag ttcgctccca ggaccctgga cagcggcggg tgctggaccg ggcagccagg
      301 cagaggcgga tcaaccgaca gttggaggca ttagagaacg acaacttcca ggatgacccc
      361 cacgccggcc tcccccagct gggcaagaga ctacctcagt tcgatgatga tgcagacaca
      421 ggaaagaaaa agaagaaaac tcgaggcgac cacttcaaac ttcgcttccg caaaaacttc
      481 caggctttgc tggaggagca gaacctgagt gcatctgagg gccccaacta cttgacagcc
      541 tgtgcgggtc cgccatctcg gccccagcgt cccttctgtg ctgtgtgtgg cttcccatcc
      601 ccgtatacct gtgtaagctg tggtgcccgg tattgcacgg tgcgctgcct gggcacccat
      661 caggagaccc ggtgtctgaa gtggactgtg taaacctggc atcagggaga agtaccccca
      721 actctcccca acccacccca gctcatccac aaaggacagc gagaaaggat ctacccattc
      781 acccagcaaa gctgtaccct gccgaccaag gagggcccca cggaccccag ggactgttgt
      841 gggggtgatc cagcccacag agtgctgtga taataaatga cgtggtaaaa gga
//
