LOCUS       NM_001401756            4312 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 865 (Znf865), mRNA.
ACCESSION   NM_001401756 XM_006228306
VERSION     NM_001401756.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4312)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 24, 2022 this sequence version replaced XM_006228306.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.870.1,
                                           SRR26643299.1122.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-71                JAXUCZ010000001.1  77851778-77851848   c
            72-4312             JAXUCZ010000001.1  77839504-77843744   c
FEATURES             Location/Qualifiers
     source          1..4312
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..4312
                     /gene="Znf865"
                     /note="zinc finger protein 865"
                     /db_xref="GeneID:100911196"
                     /db_xref="RGD:6494165"
     exon            1..71
                     /gene="Znf865"
                     /inference="alignment:Splign:2.1.0"
     exon            72..4312
                     /gene="Znf865"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..3278
                     /gene="Znf865"
                     /codon_start=1
                     /product="zinc finger protein 865"
                     /protein_id="NP_001388685.1"
                     /db_xref="GeneID:100911196"
                     /db_xref="RGD:6494165"
                     /translation="MEANQAGSGAGGGGSSGIGGEDGVHFQSYPFDFLEFLNHQRFEP
                     MELYGEHAKAVAALPCTPGPPPQPPPQPPPPQYDYPPQSSFKPKAEAPSSSSSSSSSS
                     SSSSSSSSSSSQAKKMDPPLPPTFGAPPPPLFDAAFPAPQWGIVDLSGHQHLFGNLKR
                     GGPTPGPGVASGLGTPTGTPGPLPTPSQTPPGPTVGAACDPTKDDKGYFRRLKYLMER
                     RFPCGVCQKSFKQSSHLVQHMLVHSGERPYECGICGRTYNHVSSLIRHRRCHKDVPST
                     PTGSTSQPGPALPSLGLPVPTASATASSDPAAVSSGPSATPATPATSTDGNTTPAAPP
                     GVAMPPSATTGGEGPFACSLCWKVFKKPSHLHQHQIIHTGEKPFSCSVCSKSFNRRES
                     LKRHVKTHSADLLRLPCGICGKVFRDASYLLKHQAAHAAAGTPRPVYPCDLCGKTYSA
                     PQSLLRHKAAHAPPVATEPAKDGAASVPQPPPPFPPGPYLLPADPSTTDEKATAAAAA
                     VVYGAVPVPLLSAHPLLLGGAGNGGAGGPGASGPGKTFCCGICGRAFGRRETLKRHER
                     IHTGEKPHQCPVCGKRFRESFHLSKHHVVHTRERPYKCELCGKVFGYPQSLTRHRQVH
                     RLQLPCALAGATGLTTGQGTTGACGPGAAGTSGGPADLSYACSDCGEHFPDLFHVMSH
                     KEAHMSEKPYGCDACGKTFGFIENLMWHKLVHQAAPERLLAPTSSGPQSSDGSGSSSG
                     GTDASSVLDNGLAGEVGTAVAALAGVSGGSEDAGGATVAGSGGGTSSGAERFSCATCG
                     QSFKHFLGLVTHKYVHLVRRTLGCGLCGQSFAGAYDLLLHRRSHRQKRGFRCPVCGKR
                     FWEAALLMRHQRCHTEQRPYRCGVCGRGFLRSWYLRQHRVVHTGERAFKCGVCAKHFA
                     QSSSLAEHRRLHAVARPQRCGACGKTFRYRSNLLEHQRLHLGERAYRCEHCGKGFFYL
                     SSVLRHQRAHEPPRPELRCPACLKAFKDPGYFRKHLAAHQGGRPFRCSSCGEGFANTY
                     GLKKHRLMHKAEGLGMPGTGGSTLAGKDP"
ORIGIN      
        1 ctcgggtctc cccggagcgg cggcacctcc tccgcctcct cagcctcctc ccggcggaga
       61 ccccagcgcc gggtctccct tctctccacc gaccagagat ggaggcaaac caggcaggca
      121 gcggtgccgg gggtggcggg agcagcggca tcgggggcga ggacggggtc cacttccaga
      181 gttacccatt tgacttcctg gaattcctca accaccagcg ctttgagccc atggagctat
      241 acggggaaca cgccaaggca gtggcagccc tgccctgtac cccggggccc ccgccccagc
      301 ccccacccca gcctcctccg ccccaatatg actacccgcc ccagtccagt ttcaaaccta
      361 aggcggaggc tccttcctca tcctcatcat catcttcatc ctcatcttcc tcatcttcgt
      421 cttcctcatc ctcttcccaa gccaagaaga tggatccgcc gttgccaccc accttcggag
      481 cgccgccccc tccactcttt gatgctgcct tccctgctcc gcaatgggga atagtcgacc
      541 tctctggaca ccagcacctg ttcgggaacc tgaaacgagg tgggcccaca cctgggcctg
      601 gagtagcatc aggactgggc actcctactg ggaccccagg gccacttccc acaccctcgc
      661 agaccccgcc tgggcccaca gtaggggcag cctgcgaccc aaccaaggat gacaagggct
      721 atttccgaag gctgaagtac ctgatggagc ggcgcttccc gtgcggtgtt tgccagaagt
      781 ccttcaaaca gtcctcacat ctggtccagc acatgctagt gcactccggg gaacgaccat
      841 acgaatgcgg catctgtggc cgcacctata accatgtctc cagtctcatc cgtcaccgac
      901 gctgccacaa ggatgtgcca tcaacaccaa ccggcagtac gtcacagcct gggcctgcac
      961 ttccttcact gggcctcccg gtacccacag ccagcgccac agccagctct gaccccgccg
     1021 cagtgtcctc tggcccttca gccacccctg caacgcctgc cacctccact gatgggaaca
     1081 ccacccctgc tgccccacct ggggtggcca tgcctccctc tgccactact ggcggggagg
     1141 gcccattcgc ctgctccctc tgctggaagg ttttcaagaa gcctagccac ctccaccagc
     1201 accagatcat ccacaccggt gagaaaccct tctcttgctc tgtgtgcagc aaaagcttca
     1261 accggaggga gagcctcaaa cgtcatgtga aaacgcactc ggctgacctg ctgcgcctgc
     1321 cctgtggcat ctgtggcaag gtcttccgcg atgcctccta cctcctcaag caccaggcgg
     1381 cccacgcagc ggccggaacc ccgcggccgg tgtacccttg cgacctgtgc ggaaaaacat
     1441 actcagcgcc gcagagcctg ctgcgacaca aggctgccca cgcaccacct gtggccacag
     1501 agccagctaa ggacggcgcg gcctcggtcc cacagccacc tcccccgttt cccccaggtc
     1561 cttacctcct gcccgcggac ccatccacta cagacgagaa agccacggcg gccgcagcgg
     1621 ctgtggtgta tggtgcagtg cctgtcccac ttctcagcgc acatcctctg ctgcttggag
     1681 gtgcagggaa tggcggtgct ggcggcccgg gcgcgagtgg cccaggcaag acgttctgct
     1741 gtggcatctg tggtcgcgcg tttgggcgcc gcgagaccct aaagcgacac gaacgcatcc
     1801 acaccggcga gaaaccccac cagtgccccg tgtgcgggaa gcgtttccgg gagtccttcc
     1861 atctgagcaa gcaccacgtg gtgcacaccc gagagaggcc ctacaagtgc gagctgtgcg
     1921 gcaaagtctt cggctacccg cagagcctca ctcgccaccg ccaggtgcat cggctgcaac
     1981 tgccctgcgc cctggctgga gccacaggcc tcaccaccgg acaggggacc actggggcct
     2041 gtggacctgg agctgcaggc acttcaggtg ggccggccga cctgagctac gcctgctcag
     2101 actgcgggga acacttcccg gatctcttcc acgtcatgag tcacaaggaa gctcacatgt
     2161 cagaaaaacc gtacggctgt gacgcctgcg gcaagacgtt cggtttcatc gagaacctca
     2221 tgtggcacaa gctggttcac caggctgccc cggagcgcct tctcgcgcca acatccagtg
     2281 gccctcagtc ctctgatggc agcggcagca gcagcggcgg caccgatgca tccagcgtgc
     2341 tggacaacgg actggctgga gaggtgggga cggcagtggc agcgctggct ggggtttctg
     2401 ggggcagcga ggatgcgggt ggggcgacgg tggccggatc gggtggcggg accagttcag
     2461 gcgctgagcg cttcagctgt gccacatgcg gccaaagctt caagcatttc ctgggcctgg
     2521 tgactcataa gtatgtgcac ttggtgcgcc ggaccctggg ttgcggcctc tgcggccaga
     2581 gctttgcggg cgcatacgat ctgctcctgc accgccgaag ccaccggcag aaacggggtt
     2641 tccgctgccc agtgtgtggg aagcgcttct gggaggcggc cctactgatg cgccaccagc
     2701 gctgtcacac agagcagcgg ccctaccggt gcggcgtgtg cggtagaggc ttcctgcgct
     2761 cctggtacct gaggcagcac cgcgtagtgc acacgggcga gcgcgccttc aagtgcggcg
     2821 tgtgcgccaa gcacttcgcg caatcttcta gcctagcgga gcaccggcgg ctgcacgccg
     2881 tggcccggcc tcagcgctgc ggcgcctgcg gcaagacctt ccgctaccgc tccaacctgc
     2941 tggagcatca gcggctgcac ctgggcgagc gcgcctaccg ctgtgagcac tgcggcaagg
     3001 gcttcttcta cctgagctcc gtgttgcgcc atcagcgtgc ccacgagccc ccgcggcccg
     3061 agctgcgctg tcccgcctgt ctcaaggcct tcaaggatcc tggctacttc cggaagcacc
     3121 tggctgccca tcagggcggc aggcctttcc gctgctcctc ctgcggtgag ggctttgcca
     3181 acacctatgg tctgaagaaa caccgcctga tgcacaaggc tgagggtctt gggatgcccg
     3241 gaacaggggg aagcaccttg gccggaaagg atccctgacc agggtgtttc agtgtgccaa
     3301 tcagatattc cctctggact ctacccttct ggggctgctg gtcagactct ccccacccct
     3361 ccttactgtc acccattcta aagaatccca ggtggtctag cttctttcca gtcccatgcc
     3421 ctacaaactg aagattaaat tgctccgatc ccaggccatt ctggcccttc cttcttcatc
     3481 tgtcagacac tggacttgat cctctgtcca gttgatcctc ttttgtaaac ctcatctgcc
     3541 acccagcagc attctggctc cagtgaactc tgtggtggag atgggtttga actactcacc
     3601 ccctccactt cctctgggat ctggctggac agtggactat gaacagagtt gggagggcac
     3661 aggtgggggt ctgggtgctc ctggatgggg gcgggttggg gaggggacag acgcggcttg
     3721 tacagagcag agaacaataa atggtatcaa cagggccgct ggggtctgtc cttgctgttc
     3781 ctaggggatt ccactgactg gctggacaca acacctcaca ccactctctt ttcacctagg
     3841 ttgagtgagg atttgccatg tcccgggcat tagcctatga attgggcaag tggagaggag
     3901 tgaaacaggg aagtcgcact ctcaggaact gatttgagat cccgagactc ccctccatga
     3961 tgctctcagc caccatgacc ggaagcctcc tgtctgccaa gccctgacct gggcactagg
     4021 gaaactgatg aattgattgg acatgacatt cacactccag taggctggga gagcatacct
     4081 gaggaactta agtctgcaga cttactgcag acggtctcat gtagtctagg ctggctatgg
     4141 acttgctttg taggtaaaga taggcttgaa ttttttcccc tttgagacat ggtctctcta
     4201 tgtaaccctt ggctctcctg gaactctctg tagaccagat gggcctcgaa tttacagaaa
     4261 tccacctgcc tctgcctctc tggtgctgag attaaaggtg tgcacgacca tg
//
