LOCUS       NM_001402794            2668 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 8 (Znf8), mRNA.
ACCESSION   NM_001402794 XM_039100791
VERSION     NM_001402794.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 22, 2022 this sequence version replaced XM_039100791.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643290.963.1, SRR26643289.931.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-163               JAXUCZ010000001.1  82570719-82570881
            164-290             JAXUCZ010000001.1  82574129-82574255
            291-386             JAXUCZ010000001.1  82574503-82574598
            387-2668            JAXUCZ010000001.1  82581267-82583548
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..2668
                     /gene="Znf8"
                     /gene_synonym="Zfp128"
                     /note="zinc finger protein 8"
                     /db_xref="GeneID:120099766"
                     /db_xref="RGD:41193534"
     exon            1..163
                     /gene="Znf8"
                     /gene_synonym="Zfp128"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..1825
                     /gene="Znf8"
                     /gene_synonym="Zfp128"
                     /note="zinc finger protein 128"
                     /codon_start=1
                     /product="zinc finger protein 8"
                     /protein_id="NP_001389723.1"
                     /db_xref="GeneID:120099766"
                     /db_xref="RGD:41193534"
                     /translation="MDQQDKAATVVIASRPQATQLQEPVTFRDVAVDFTQEEWGQLDP
                     TQRTLYRDVMLETFGHLLSVGPDLPKPAVISQLEQGAELWVADRGGSQACHPGWILEP
                     EDHTLLKDQDLPKMKPSPITEKDGFAKAVSCHSMTGIYRENDGQRQALKKDQSNLRQL
                     NGPKEIPVQSQSYKSLGLVETCVLGLNTDLLPDISRIEYGYTYGSQVKNSEHNPSLVS
                     QQTDSPASQPFDDNGSQKAFDQIMPITELTKSQVQDKPYKCTDCGKSFNHNAHLTVHK
                     RIHTGERPYMCKECGKAFSQNSSLVQHERIHTGDKPYKCDECGKSFCHSTHLTVHRRI
                     HTGEKPYECQDCGRAFNQNSSLGRHKRTHTGEKPYTCSVCGKSFSRTTCLFLHLRTHT
                     EERPYECNHCGKGFRHSSSLAQHQRKHAGEKPYECRQRLIFEQAPALTKLEWTEPLSC
                     DPPLSQSERTQQSDRPFKCNQCGKCFIQSSHLIRHQITHNREEEPVRGRSRRREQHCR
                     PGSKLIRNPHSNSKEVPIAQAKAGQASRALALFDLHEIMQEKNSVHVIGVEEPSVGNS
                     MLFDIRESR"
     exon            164..290
                     /gene="Znf8"
                     /gene_synonym="Zfp128"
                     /inference="alignment:Splign:2.1.0"
     exon            291..386
                     /gene="Znf8"
                     /gene_synonym="Zfp128"
                     /inference="alignment:Splign:2.1.0"
     exon            387..2668
                     /gene="Znf8"
                     /gene_synonym="Zfp128"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attgtccagc gggaggccgg tcggctggtc cccactacgg ggctgcgttt tagattaggg
       61 tcgccttgga cgtctgtgtc tgacctgttg gcctgggatg gaccagcagg acaaagcggc
      121 cacagtggtg attgcctcgc ggcctcaagc aacacaactt caggagccag tgactttccg
      181 agatgtggct gtggacttta cgcaagagga gtggggacag ctggacccta cccagaggac
      241 tctgtatcgt gatgtgatgc tggagacctt tgggcacctt ctctctgtgg gtcctgatct
      301 tcccaaacct gcagttatct cccagctgga acaaggtgct gagctgtggg tggcagacag
      361 aggaggctcc caggcctgcc atccaggttg gattcttgaa cctgaagacc acacactgct
      421 caaggaccag gacctcccaa aaatgaaacc atcccccatt acagaaaagg atgggtttgc
      481 aaaggctgtt tcttgtcatt ctatgacagg gatatatcgg gaaaatgatg gccagaggca
      541 ggcactcaag aaggaccaga gtaacttaag gcagttgaat ggccccaaag agataccagt
      601 tcaaagtcaa agctataaaa gccttggact tgtagaaacc tgtgttcttg gcttaaacac
      661 agatctatta ccagatattt ctagaataga gtatggctat acttatggct cacaagttaa
      721 aaattcagaa cataacccaa gcttagtcag tcaacagaca gactccccag catcacagcc
      781 ttttgatgac aatggcagtc aaaaagcctt tgatcagatt atgcccatta cagaactcac
      841 aaaaagtcaa gtgcaagata aaccctataa gtgtactgac tgtgggaagt catttaacca
      901 taatgcacat cttacagtgc acaagagaat ccatacggga gaaagacctt acatgtgcaa
      961 agagtgtggg aaagccttca gccaaaactc ttcccttgtt caacatgagc gaatccacac
     1021 cggagacaaa ccttataagt gtgatgaatg tggaaaatct ttttgccaca gtacacacct
     1081 tacagtccat aggagaattc acactggaga gaaaccctat gagtgtcagg actgtggaag
     1141 ggccttcaat cagaattcat ccctgggtcg acacaagagg acacacactg gggagaagcc
     1201 ttatacctgc agcgtttgtg ggaaatcctt ctcccggacc acttgcctct tcctgcacct
     1261 gaggactcac actgaggaaa ggccatatga gtgtaatcac tgtggaaagg gcttcaggca
     1321 cagttcttcc ctggcccagc atcagcggaa gcatgctggt gagaaaccct atgagtgccg
     1381 acagaggctg atctttgagc aggcaccagc tttaacaaag ctcgagtgga cagaacccct
     1441 cagctgtgac ccaccattaa gtcaaagtga aaggactcaa cagagcgata ggccctttaa
     1501 atgtaatcag tgtggaaagt gtttcattca gagttctcac ctcatccgac atcagataac
     1561 ccacaacaga gaggaagaac cagtacgtgg acgtagccga agacgggaac aacactgtag
     1621 accaggctca aaactcatcc ggaatccaca ctcaaattca aaagaggttc caatagccca
     1681 ggcaaaggca ggacaagcaa gcagagccct ggccttgttt gaccttcatg aaattatgca
     1741 ggagaaaaac tctgtgcatg ttattggggt agaagaacct tcagtgggca attccatgct
     1801 gtttgacatc agagaatcta gatagagaga tgatttttta gataactttt gagttaccag
     1861 gcacaaacat tacatccaca gtgtatgggt ggcaagagaa gatggcttaa tgtcagtagt
     1921 gacctctgac tttgtaagga agtggtgcct cccacacagt tgaggttggt gtttctcaaa
     1981 tgtatcaaac tcagttcctg tttaaggaca gcctctttgt ttgttttctg agacaaggtc
     2041 tcatgtggcc caagctggcc tcaaactcac tatatatcca aggatgaccc tgaattttct
     2101 gatccttctg tcttcattca cctccctaat tctgggattg tggctaaatg ccactaaacc
     2161 cagcaacaac agacaccttg agatatcttc tccattatcc caaaatgagt ttaccagtaa
     2221 taaaaacctc tgcacaggca tagtttggaa ataacacatg acccctgttg tgtgttattt
     2281 taaaaagcaa gcttctgcct ttgcccggga ctgtggccct tgatcctggt ttagctccaa
     2341 gatcggctgc tcccagtccc actccccatt tgtctgttcc tcccagctta gcttcaccaa
     2401 tggccagcta ctgcctttcc tgggagctgc aatcgttccc ccaagttctt tgtaaaggat
     2461 agttaaagta atttatggtg tactgtgtta gtgtggtatc ttaccatgtc ccgtgtgggc
     2521 ccatttgacc aggagatcat ggtctgaaac tttcagactg gttcaaggta tactgctgtc
     2581 tacaaataat accataaagg actttatcat gccaaagtga tattgcaaaa tagtaatgaa
     2641 ttcttataaa agtttgaaca aatcaaaa
//
