LOCUS       NM_001398721            3869 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 660 (Znf660), mRNA.
ACCESSION   NM_001398721 XM_017596164
VERSION     NM_001398721.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3869)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000008.1.
            
            On Dec 22, 2021 this sequence version replaced XM_017596164.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.1845934.1,
                                           SRR26360194.1791318.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-246               JAXUCZ010000008.1  131401768-131402013
            247-356             JAXUCZ010000008.1  131402837-131402946
            357-3869            JAXUCZ010000008.1  131411534-131415046
FEATURES             Location/Qualifiers
     source          1..3869
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..3869
                     /gene="Znf660"
                     /note="zinc finger protein 660"
                     /db_xref="GeneID:108351806"
                     /db_xref="RGD:11394460"
     exon            1..246
                     /gene="Znf660"
                     /inference="alignment:Splign:2.1.0"
     exon            247..356
                     /gene="Znf660"
                     /inference="alignment:Splign:2.1.0"
     exon            357..3869
                     /gene="Znf660"
                     /inference="alignment:Splign:2.1.0"
     CDS             652..1665
                     /gene="Znf660"
                     /codon_start=1
                     /product="zinc finger protein 660"
                     /protein_id="NP_001385650.1"
                     /db_xref="GeneID:108351806"
                     /db_xref="RGD:11394460"
                     /translation="MRRKMGKFKHKTLEDSKSPAEGSDQEGENSGHQFCASATEKRGH
                     GGRRQYVCPECGKAFSQSANLTVHERIHTGEKPYKCTVCGKAFSHSSNLVVHRRIHTG
                     LKPYTCRDCGKSFSGKSHLIGHQEVHSGEKTYECKECGKAFSRSSGLIAHHRVHTGEK
                     PYTCSECGKAFSRSSNLTQHQRTHRGKKVYKCKECGKTCGSNTKIIDHQRIHTGEKPY
                     ECAECGKTFILRKALNEHQRLHRREKPYKCKECGKAFTSNRNLTDHQRVHTGEKPYKC
                     NECGKTFRQTSQVILHLRTHTKEKPYKCSECGKAYRYSSQLIQHQRKHNEEKEALLFT
                     GQV"
ORIGIN      
        1 gttctgggga ctggtggttc agtgggcgac acgcagcagt agcgctctgg gagccaagaa
       61 ctcccgcggg tggtgccgcc ctgatctcgg ggtgcctgcc tttgtccagc atctcctgta
      121 attgtggagg attatcagga cctgccaagg cgtcggggac caggctctcc ctggacgacc
      181 caaccgcaga gctgtgtcca agcccagctg cgtcgccagc gaagacgctg gggtctggag
      241 gaggggcgac tcaagcgccc attaggaatg tctgcactga acccaaggag gtgatcagga
      301 aaagtctgtt ggacagatcc ttctgagcaa agcatttgct gtgcctgaga atgaggctct
      361 ctgcttttga acagtcatcc ctctacgtga gactctgtga cctactccag cttgtcttcc
      421 ttgaataatt ctcaccgtat tacagaaaaa gtggggccta tacaccttct ctttctcctg
      481 tcaggtggtg aaatagactg agggggtatt cattctaaag caccagtcct gaacatcaga
      541 atcctatttg acccccaaga gaattccaca taagtgttgc agaggacgta aaagatttaa
      601 caggaaaaga taagaggagg aaggccactg gtatgccccc agctggagag gatgcggaga
      661 aagatgggaa agttcaaaca taagacatta gaggatagca agtcacccgc tgaaggaagt
      721 gaccaagaag gtgaaaacag tggccatcag ttctgtgcct ctgcaacgga gaagagaggt
      781 catggtggaa ggagacagta tgtgtgtcct gagtgtggaa aagccttcag tcagagtgcc
      841 aacctcactg tgcacgagcg aatccataca ggagagaagc cttacaagtg tacagtgtgc
      901 gggaaagcct ttagtcacag ctccaacctc gtggttcatc gacgaatcca cactggactt
      961 aagccgtaca cgtgtcgtga ctgtgggaag tcattcagcg gtaagtcaca cctcatcggg
     1021 caccaggaag tccacagcgg ggaaaagaca tacgaatgta aagagtgtgg gaaagccttc
     1081 agccggagct caggacttat cgctcatcac agagttcata ctggtgagaa gccctacact
     1141 tgcagcgagt gtgggaaggc gtttagcagg agttcaaatc tcactcaaca ccagagaacg
     1201 cacagaggga aaaaggttta caaatgtaaa gagtgtggaa agacatgtgg ttctaataca
     1261 aagattatag accatcagag gattcacact ggggagaagc cctacgagtg cgctgagtgt
     1321 gggaaaacct tcatcttaag gaaggccctt aatgaacacc agaggctcca ccgcagagag
     1381 aaaccttaca aatgtaagga atgtgggaaa gcgtttacct ctaaccgaaa cctcacggat
     1441 caccagagag tgcacactgg agagaagcct tacaagtgta acgaatgtgg gaaaaccttc
     1501 aggcaaacat ctcaggttat tctccatttg cgaactcata ctaaagagaa gccctataag
     1561 tgtagcgagt gtgggaaagc ttatcgctac agctcgcagc tcatccaaca ccaacgaaag
     1621 cataacgaag agaaagaagc cttactgttt actggccagg tgtaatggca ttcgctgtta
     1681 atcctggcat tgaggaggca gtgacaggga ggtctcggtg acttttagtc cagcctggtc
     1741 tacctaatga gttctacact agccaaagtt acaaaatgag actctgtttt aggaaaacaa
     1801 aatggcaaca atgttaatca ctacttttct gaaaattaga tttttagtaa cattaaactt
     1861 aattctgctt ctacaaatcc atacagggaa aataataagt agctaaagtg taacaaaagg
     1921 gatatttatg ccagcatcat cataactgaa agggaaaaca aacaaacaaa ataccaagcc
     1981 acccaaacaa acagagacca cccaaactgt aaatattaca tgtgcagcat gaaaggaatc
     2041 attacacgtc tgaaaccatt ttgtctttta aaagaatttt taatgtatgc catgggagaa
     2101 atttcggggt aaaatggaaa gtgaagggat ggaatgtcca gataaaatat gttcgcctag
     2161 gaaaaatggg gaaagagaag gagaaccaaa cctacatttt aacaatggtt atctctaggt
     2221 gatagactgt agggtgattt ctattttctt ctgtatactt ttctatgcct tctagatttt
     2281 ctacaatgaa agggttactt ttatatttac gaaaaatata ctctaaatgc aagtacatac
     2341 ttgtttttat tcagtggtag gaaaagtacc tattgtgtag tctttaaaat ctcaggattc
     2401 atgggttggg atttagctca gtggtagagc gcttggccta gcaagtgcaa ggccctgggt
     2461 ttggtcccca gctccgaaaa aaaaaaatct caggattcgc cctaatcccg acaccggtgg
     2521 aagtagaatt aggagccaat ccatttcttt tagaatccac ttcttgctac tgaaacaggt
     2581 gctgcctttt gttctctgca gtgtcagact ctgtgatcac cagtgctgcc tttgatccct
     2641 cagaatcaga ctgtgatcac tagtgctgcc ttttgttctc tgcttaggtg agaacacagt
     2701 aggacattag tgcaccttct tttctgtata gtgaaataac catcctgtaa tatcgggcta
     2761 ccagagctcc accctttcag cagatgtcta gacaggagag aaagtttttc tcttaatgag
     2821 ctggactcaa aaactaggaa gtagagaatt ttgccttcac cttgttatta tgtgaggtga
     2881 ttgggtgaaa tgtagttagg atgggaggcc tgtgtcctga tccaccagct gagcgccagc
     2941 ttaactactt tggatgaatg gtgccactgc tcagacttgt gtgaagaggg aaaggttgtt
     3001 cacctcaaag tggtgtgtga ggattaagtg agatgatgct agcgatgatg ccacacctgg
     3061 caggtggcag aacagaccat atgcctttaa tcccagcact tggaggcaga gacaggcaga
     3121 tctctgagtt ggagcctacc gtgatctaca gtgggctcca ggacagccag ggctacacag
     3181 agaaatcctg tcttgaaaaa caaatataac ttatctgact tgagaggaaa atgggtaaca
     3241 tcattttatc ttgggttttt taatgatatt gctatttttc ttgcatgtgt gtctgtgtgg
     3301 gggtattaga tctccagaaa ctagagttac aggcagttgt gagctgccgt gtggttgctg
     3361 ggaattgaaa cccagttctc tgcaagaaca gccagtgctc tcaaccgccg agccatctct
     3421 ccagcctcca agatatgatt taatatggct ttgattaaag ggaaatctgt aagacaaagc
     3481 tgaaggatgt ttttaaatcg tgtactacat tctagatggc gcttagtaag ctgattctcc
     3541 atgtcagctt tctctgcctt tctagtcgtc ttgtaggcta acaataacta ccctaaacgt
     3601 ttgacatgtc tctagggcaa tagtttccag gcttccggag atggatttgt ttttgtgttt
     3661 agggataatc gattgtcatt gttttataac atgaaaaaaa gcagccatcg tctctataga
     3721 ggaactaaca ttactgaagt aagaagactg taaactcaag aaaaatgcgg tgctctgtaa
     3781 aaacatcctc gccaaactgg caatagccac tcatttcagg ttttttagcc taacagatta
     3841 aagctttatc tccaactagt gactggaaa
//
