LOCUS       NM_001401773            3014 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 48 (Znf48), mRNA.
ACCESSION   NM_001401773 XM_008759934
VERSION     NM_001401773.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3014)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 24, 2022 this sequence version replaced XM_008759934.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ212088.1, SRR26643292.4108.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-428               JAXUCZ010000001.1  191284976-191285403
            429-3014            JAXUCZ010000001.1  191286897-191289482
FEATURES             Location/Qualifiers
     source          1..3014
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q37"
     gene            1..3014
                     /gene="Znf48"
                     /note="zinc finger protein 48"
                     /db_xref="GeneID:103690203"
                     /db_xref="RGD:9115869"
     exon            1..428
                     /gene="Znf48"
                     /inference="alignment:Splign:2.1.0"
     exon            429..3014
                     /gene="Znf48"
                     /inference="alignment:Splign:2.1.0"
     CDS             440..2212
                     /gene="Znf48"
                     /codon_start=1
                     /product="zinc finger protein 48"
                     /protein_id="NP_001388702.1"
                     /db_xref="GeneID:103690203"
                     /db_xref="RGD:9115869"
                     /translation="MEASPVDEFEHTPQERDGPEFKEEEQLGPGHEVGNASLKPEGIQ
                     SWDDLWVRREGLGKHQPRDAVPRVLGEPRWGQGSNDRAAVCGECGKSFRQMSDLVKHQ
                     RTHTGEKPYKCGVCGKGFGDSSARIKHQRTHTGEKPYRVRPPAPGPPKMPRSRIPAGE
                     RPTICGECGKSFRQSSDLVKHQRTHTGEKPYKCGICGKGFGDSSARIKHQRTHRGDQL
                     PRPVVPRRQPSQAAPEATHRPKAQDKPYICTDCGKRFVLSCSLLSHQRSHLGPKPFGC
                     DVCGKEFARGSDLVKHLRVHTGEKPYLCPECGKGFADSSARVKHLRTHSGQRPHACPE
                     CNRSFSLSSTLLRHRLTHMEPQDFSFSAYPVAPLIPSPPPPPLGTSPSLTPRSPSQSS
                     DGPFGLPGLEPEPGGPQAGEPPPPLAGDKPHKCPECGKGFRRSSDLVKHHRVHTGEKP
                     YLCPECGKGFADSSARVKHLRTHQGERTRPPPPPTLLRPHNPPGSVPIVPQSRVQGQP
                     SGPSQLHVCGFCGKEFPRSSDLVKHRRTHTGEKPYKCAECGKGFGDSSARIKHQRGHL
                     ALRPFGVGDGLPMPLQEESPAGME"
ORIGIN      
        1 aggctctttc cccgttgtcc cacgcgggca gtcggacccc gccgcgccag ttgaccagcc
       61 gaggaggcac gccactaacg ccgcagggca cggctagaac tggtgctggc cgccgctgcc
      121 accgccgccg agcccccggc tcctccgggt cctagagcgg ttcgccgagg cccgtgcttc
      181 cgcttcccgt cccgccccgc ggcgcccggg acgtgggccg agccccctcc cggcgtggcg
      241 tggagcccgt acccgagccg ctggctgctg ggtccctgtt gtactgcagg gaacagggca
      301 gcgggtgccc tcggagtcac cagggccgcg tcccggtcgt gggcggacgg tgcagcgcgc
      361 tacacagccc tggggcgccg agcttcgcgg cgcagcggac ttggagcggc cgagagccag
      421 cggcacagga tctgagaata tggaggcttc tccagtggat gagtttgaac atacaccaca
      481 ggagagggat ggcccagagt tcaaggaaga ggagcagtta ggcccgggtc atgaagtagg
      541 aaatgcttct ctaaaacctg aaggcattca gagctgggat gacttatggg tccgcagaga
      601 gggtcttgga aagcatcagc ctcgagatgc agttccccgg gtcctgggag aacccagatg
      661 gggacagggc agtaatgacc gagctgcggt gtgtggtgag tgtggcaaga gcttcaggca
      721 gatgtccgat ttggtaaaac accagaggac tcacacaggg gagaagccct acaagtgtgg
      781 tgtctgtggc aagggctttg gggatagctc agcccgaatc aaacatcaac gaactcacac
      841 tggtgagaag ccctataggg ttcggccacc agccccaggt cctcccaaga tgcctcggtc
      901 tcggattcct gctggtgaac gccccactat ctgtggtgaa tgtggcaaga gctttcggca
      961 gagctctgac ctggtaaaac accagcggac acacacagga gagaagccct acaagtgtgg
     1021 catctgtggc aagggctttg gtgacagttc tgcccgaata aagcaccagc gaacacacag
     1081 aggggaccag ctcccccggc cagtggttcc ccgacggcag ccctctcagg cagctccaga
     1141 agctacacac agacctaagg cccaggacaa gccatatatc tgcactgact gtggcaagag
     1201 gtttgtgcta agctgcagcc tactgagcca ccaacgcagt cacttaggac ccaaaccctt
     1261 cgggtgtgat gtatgtggaa aggagtttgc acggggctcg gacctggtga agcatctgcg
     1321 ggtacacacg ggtgagaagc cctacctgtg ccctgagtgt ggcaagggct ttgctgacag
     1381 ttctgcccgt gtgaagcacc tccgcaccca cagtggccag aggcctcacg cctgcccaga
     1441 atgtaaccgc agctttagcc tcagctccac tctcctccgg caccgcctca cccacatgga
     1501 gccccaggac tttagtttct cagcctaccc agtagccccg ctcatcccta gcccacctcc
     1561 acctcctctt ggcactagcc cctcactgac gcctcgaagc ccctcacagt ccagcgatgg
     1621 gcctttcggc ctgcctggct tggaaccaga gcctgggggc ccgcaggctg gggaaccacc
     1681 cccaccactg gcaggtgaca agccccacaa gtgtcctgag tgtggcaaag gtttccgccg
     1741 aagctctgat ctggtgaaac accatcgtgt tcacacaggg gagaaacctt acctctgtcc
     1801 tgagtgtggc aagggttttg ctgacagttc tgcccgagtc aagcacctcc gtacccacca
     1861 gggcgagcgc actagaccac caccaccacc tactctcctg cggcctcata atccacctgg
     1921 ttctgtaccc atagtccctc agtctcgagt gcagggccag ccctctggac ccagccagct
     1981 tcatgtgtgt ggcttctgtg ggaaagagtt cccccggagc tcagatttag tcaaacacag
     2041 gcgtacacat actggggaga agccatacaa atgtgccgag tgtggcaagg gcttcggtga
     2101 cagctctgct cggataaagc accagcgtgg gcatctggcc ttaaggccct ttggggtagg
     2161 ggatggtctg ccaatgcccc ttcaggagga gtcaccagca ggaatggagt gacggggagg
     2221 gtagggagga tagaagccca gggttacggt gcgggggtga ggaggacgtg agtagctaga
     2281 aacagattag agactacata actttcatgc tcaggaaact gtgttaggtg ttgggacctt
     2341 gccagtatga gctgtgtcac agcttctagc acagattagg cccttgattg ttgtaaaatt
     2401 gataagctgg cctcaattct aaaatcctac tgcctcctgt taagaacaca cccctcagct
     2461 ggacagattt gtgtccaaac tttagttcta gaattcaaga ggcaaaggca ggcagctctc
     2521 ttgaattcat ggccaggctg atctagagag ttccaggtag gccagaactt catggtgaaa
     2581 cagaaaacaa aaaccttgat cctccaacct cagtctggga gaacagattg ttggaatttt
     2641 aggtgtcaag acaaggcaga ggcatcttga cgcccctgag ggtgaggtat tgctgtggag
     2701 aaagcagttt tcacctctgc tgtgggtcac aggacatggt tttatccaag aagggcactt
     2761 tgggaaagag cttatacctg tatgcttttg cgggtccttc ccactcagac actgggacac
     2821 tgatgaaaca agagccagca ggagcactca gattcccgtc tggatgcaaa gcctaggtca
     2881 tcttggacat ctgcaaagac agcctgctga gcaagagcag ggccagtgca ggccagagaa
     2941 gcttcaaatc tccacggcta agtgtttgtc tgtctcctta ttaataaata gccccgtgtc
     3001 tgaggtttgc tgtg
//
