LOCUS       NM_001399458            2996 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 354B (Znf354b), mRNA.
ACCESSION   NM_001399458
VERSION     NM_001399458.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Wajapeyee,N., Malonia,S.K., Palakurthy,R.K. and Green,M.R.
  TITLE     Oncogenic RAS directs silencing of tumor suppressor genes through
            ordered recruitment of transcriptional repressors
  JOURNAL   Genes Dev 27 (20), 2221-2226 (2013)
   PUBMED   24105743
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM067393.1, SRR26643293.62421.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on conservation,
                                                expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-92                JAXUCZ010000010.1  35745822-35745913   c
            93-170              JAXUCZ010000010.1  35745231-35745308   c
            171-297             JAXUCZ010000010.1  35743553-35743679   c
            298-393             JAXUCZ010000010.1  35742740-35742835   c
            394-2996            JAXUCZ010000010.1  35734794-35737396   c
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..2996
                     /gene="Znf354b"
                     /note="zinc finger protein 354B"
                     /db_xref="GeneID:102556119"
                     /db_xref="RGD:7562538"
     exon            1..92
                     /gene="Znf354b"
                     /inference="alignment:Splign:2.1.0"
     exon            93..170
                     /gene="Znf354b"
                     /inference="alignment:Splign:2.1.0"
     CDS             138..1943
                     /gene="Znf354b"
                     /codon_start=1
                     /product="zinc finger protein 354B"
                     /protein_id="NP_001386387.1"
                     /db_xref="GeneID:102556119"
                     /db_xref="RGD:7562538"
                     /translation="MAPDKREGKSQVSVTFEDVAVLFTRDEWKKLDLSQRSLYREVML
                     ENYSNLASLGFPFTKPKMISVLQQGEEPWKAEKESHGCSSLGCNSSLQTTKSTQTKES
                     SFQELKRKQLKRDEDWDFTSGKSCRPDNSFKKQNKNESLQIISITHTKILTVDKSHKN
                     FEFGPSVSLKSISKQKIAREKTQRNSLKENSTSLNQPKIKTLEKRFKCSTCEKAFIHS
                     SSLRKHLKNHSGERLFQCKDCLKAFSQSSALIQHQRTHTGEKPYICNECGKAFSHSAS
                     LCKHLRTHTLEKSYTCKECGKSFSRRSSLFLHQKIHARENPHRYNPGRKASASLSGCQ
                     RAHSRKKTYLCNECGNTFKSSSSLRYHQRIHTGEKPFRCSECGRAFSQSASLIQHERI
                     HTGEKPYRCGECGKGFTSISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIHERIHT
                     GEKPCKCKVCGKAFRQSSALIQHQRMHTGERPYKCNECGKTFRCNSSLSNHQRIHTGE
                     KPYQCIECGMSFGQSAALIQHQRIHTGEKPFKCNTCGRSFRQSSSLIAHQRIHTGEKP
                     YECSACGKLFSQRSSLTNHYKIHIEEDSLNIDLHE"
     exon            171..297
                     /gene="Znf354b"
                     /inference="alignment:Splign:2.1.0"
     exon            298..393
                     /gene="Znf354b"
                     /inference="alignment:Splign:2.1.0"
     exon            394..2996
                     /gene="Znf354b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgattcgc tgttctgggt tagctcccca ggctaagtct ccatgcgtgg cggctctgag
       61 ccttcatgag gcgtggcggg acctgggggg aggtcacatt tttgtaccca tctctgagaa
      121 aagtccagac agagaccatg gctccagaca aaagggaagg gaagtctcag gtgtcagtga
      181 catttgaaga tgtggctgtg ctctttaccc gggacgagtg gaagaagctg gatctctctc
      241 agagaagcct gtaccgtgag gtgatgctgg agaactacag caacctggcc tcgctgggat
      301 ttccatttac caaaccaaag atgatctccg tgctgcagca aggagaagaa ccctggaaag
      361 cggagaaaga aagccatgga tgctcctctc ttggatgtaa tagcagtctt caaaccacaa
      421 aatcaactca aactaaagag tcatcatttc aggaattaaa gaggaaacaa ctcaaaaggg
      481 atgaggactg ggactttacc tcaggaaaat cctgcagacc tgacaacagt tttaaaaaac
      541 agaacaaaaa tgaaagctta caaataattt ctatcaccca tacaaaaatt cttactgtag
      601 ataaaagcca taagaatttt gagtttggtc caagtgtcag cctgaagtca atcagtaagc
      661 aaaagattgc tagagaaaaa acacaaagaa atagcctcaa ggaaaattca acttcactta
      721 atcaaccaaa aatcaagaca ttagagaaac gctttaaatg tagtacttgt gaaaaggcct
      781 tcattcacag ctcatccctt cgcaaacatc tgaaaaacca tagtggagag agattatttc
      841 aatgtaaaga ctgtttgaaa gctttcagcc aaagttccgc tcttattcaa catcaaagaa
      901 ctcatactgg agagaagccc tacatatgta atgagtgtgg gaaggccttc agccacagtg
      961 catccctttg taagcaccta agaactcata ctttggagaa atcctataca tgcaaagaat
     1021 gtggaaaatc ttttagcaga aggtctagtc tttttttgca tcaaaaaatc catgcccgag
     1081 aaaaccctca tagatataac ccaggaagga aggcatccgc ttcgctctca ggatgccaga
     1141 gagctcattc caggaagaag acctacttgt gtaacgaatg cggcaacacc ttcaagtcta
     1201 gctcctccct ccgttaccat cagagaatcc acactggaga gaaacctttc agatgtagtg
     1261 aatgcggcag agccttcagt cagagcgcat cacttattca gcacgaaaga atccacacgg
     1321 gagaaaagcc ctacaggtgt ggcgagtgtg gaaaaggctt tacttctatc tcaagactca
     1381 atagacaccg gataattcat acaggagaga aattgtataa ttgcaatgag tgtggcaaag
     1441 ccttaagttc ccactcaact cttattattc acgaacgaat ccacactgga gagaaaccat
     1501 gtaagtgtaa agtttgtggg aaagccttca gacagagttc agctctgatc caacatcaga
     1561 gaatgcacac tggggaaaga ccctataaat gtaacgagtg cgggaaaaca ttcaggtgta
     1621 actcatccct aagtaaccac cagcgaatcc acactggaga gaaaccttat caatgtatag
     1681 aatgtgggat gtcgtttgga caaagtgcag ctcttattca gcaccagagg attcacacgg
     1741 gagagaaacc ctttaaatgt aacacctgtg ggaggagttt taggcaaagc tcctccctta
     1801 ttgcccatca gcggattcat actggagaga aaccctatga atgtagtgca tgtggaaagc
     1861 tcttcagtca gaggtcctcc cttaccaatc attataaaat tcacattgaa gaggactcct
     1921 tgaacataga tttgcatgag taaaagcaat tgaccaaagt tcttcagagg atatatactt
     1981 catattgaca ataaatatag tgaatataag acaacttatt tagccctatg agatattaaa
     2041 attgcaagaa taaactgtga tcatataata acagagaaaa tttcacacct gtcagtcaca
     2101 ttttgtgatc agatacttta ccatagcaga cattgacaat ggccatttat aaggtaacag
     2161 aaatgctttt ttattttatc cacattatat aatatatgca atatataaac actagaaaga
     2221 tctgagttct ggagtgttag tttgtcatta gaaaaaggag tatcacctat tagcatattt
     2281 actacagcta atattttaat agtaaaccat taaaatatat gcatttttaa atcagtggac
     2341 caaattaaac aaacaaaaac caaaatacta cctcatacta tcttttccta aactattgtc
     2401 aaactgcatg atttttatta aagaggaaga aagagaactg ttttaaattt tcattcttct
     2461 aattttctaa ctgccctaca ctcctcccac acttaataca cataatctaa ttttgtgctg
     2521 tgaatgaatt attctccttc attgccttga aacatttatt atgtcctgag tggtaatgtt
     2581 aaatactagt cttagccacc ctggagcaaa cagactagct aagcttgcca gaatgagttg
     2641 aaagagaaca atgagggatg gcagttgaca tcaaccaccc ccagcttaca tcatacagat
     2701 gaacccccaa acgtgcacac cacacgcaga catacgtgga gcaaattccc attttccggt
     2761 gctagtacgt agacataact aatttctaca acttaccttg tatgagtaac ctggttgatt
     2821 tatgtctgca tggtacttgt gtgcatacaa ctttccttct ttctaatagt gtatttgtag
     2881 attcttggca ttcacaatct ttttatctgc aaattccatt tttttctctc ttctaatcag
     2941 tgtcttattt tctgacaatg tggcactacc taaacaattc tagtttttct ctcctg
//
