LOCUS       NM_001100838            4019 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger, MYND-type containing 8 (Zmynd8),
            mRNA.
ACCESSION   NM_001100838 XM_001061666 XM_001071923 XM_001071994 XM_215942
VERSION     NM_001100838.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4019)
  AUTHORS   Yao,N., Li,J., Liu,H., Wan,J., Liu,W. and Zhang,M.
  TITLE     The Structure of the ZMYND8/Drebrin Complex Suggests a Cytoplasmic
            Sequestering Mechanism of ZMYND8 by Drebrin
  JOURNAL   Structure 25 (11), 1657-1666 (2017)
   PUBMED   28966017
REFERENCE   2  (bases 1 to 4019)
  AUTHORS   Li,N., Li,Y., Lv,J., Zheng,X., Wen,H., Shen,H., Zhu,G., Chen,T.Y.,
            Dhar,S.S., Kan,P.Y., Wang,Z., Shiekhattar,R., Shi,X., Lan,F.,
            Chen,K., Li,W., Li,H. and Lee,M.G.
  TITLE     ZMYND8 Reads the Dual Histone Mark H3K4me1-H3K14ac to Antagonize
            the Expression of Metastasis-Linked Genes
  JOURNAL   Mol Cell 63 (3), 470-484 (2016)
   PUBMED   27477906
REFERENCE   3  (bases 1 to 4019)
  AUTHORS   Yamazaki,H., Kojima,N., Kato,K., Hirose,E., Iwasaki,T., Mizui,T.,
            Takahashi,H., Hanamura,K., Roppongi,R.T., Koibuchi,N., Sekino,Y.,
            Mori,N. and Shirao,T.
  TITLE     Spikar, a novel drebrin-binding protein, regulates the formation
            and stabilization of dendritic spines
  JOURNAL   J Neurochem 128 (4), 507-522 (2014)
   PUBMED   24117785
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AB074010.1.
            
            [WARNING] On Jul 18, 2024 this sequence was replaced by
            NM_001100838.2.
            
            On or before Oct 11, 2007 this sequence version replaced
            XM_215942.4, XM_001061666.1, XM_001071994.1, XM_001071923.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB074010.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4019
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..4019
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /note="zinc finger, MYND-type containing 8"
                     /db_xref="GeneID:296374"
                     /db_xref="RGD:1309544"
     exon            1..26
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            27..97
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..3699
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /note="protein kinase C-binding protein 1; spikar delta C"
                     /codon_start=1
                     /product="MYND-type zinc finger-containing chromatin
                     reader ZMYND8"
                     /protein_id="NP_001094308.1"
                     /db_xref="GeneID:296374"
                     /db_xref="RGD:1309544"
                     /translation="MDISTRSKDPGSTERTAQKRKVPSPPHSSNGHSPQDSSTSPIKK
                     KKKPGLLNSSSKDQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLC
                     CELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKF
                     AIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAK
                     WILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSN
                     PHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPVNNCYLMSKEIPFSVKK
                     TKSIFNSAMQEMEVYVENIRKKFGVFNYSPFRTPYTPNSQYQMLLDPSNPSAGTAKTD
                     KQEKVKLNFDMTASPKIILSKPLLSGGAGRRISLSDMPRSPTSTNSSVHTGSDVEQDP
                     EKKAPSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQAPTPIMTKPDK
                     TSTATTGSILNLNLDRSKAEMDLKELSESVQQQSAPVPLISPKRQIRSRFQLNLDKTI
                     ESCKAQLGINEISEDVYTAVEHSDSEDSEKSESSDSEYVSDEEQKPKNEPEDPEDKEG
                     SRVDKEAPAIKRKPKPSNQVEVKEEVKSNSPVGEKVDPAPAKDKASPEPEKDFAEKAK
                     PSPHPTKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDPSGREGRKNKKEPKVPSP
                     KQDAIGKPPPPTPAGNQSPPETPVLTRSATQAPAAGVTVAATTSTMSTVTVTAPATAA
                     VTGSPVKKQRPLLPKETVPAVQRVVWNASSKFQTSSQKWHMQKIQRQQQQQQQQQQQQ
                     QSQQQQPQSSQGTRYQTRQAVKAVQQKEVTQSPSTSTITLVTSTQPAALVSSSGSAST
                     LASVINADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRR
                     LRIEIEKLQWLHQQELAEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVD
                     ETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEAN
                     QETGNKTSQGSSSNTQSAPSEPASTPKEKETSSSSSNSSSTEKSKDSNSTLDLSGSRE
                     TPSSILLGSNQGSDHSRSSKAGLWSSSEEKRGSSRSEHSAGTSTKNLMPKESRESRLD
                     TFWD"
     exon            98..246
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            247..465
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            466..579
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            580..672
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            673..760
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            761..816
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            817..894
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            895..1010
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            1011..1492
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            1493..1639
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            1640..1792
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            1793..2302
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            2303..2707
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            2708..2898
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            2899..2979
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            2980..3058
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            3059..3298
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            3299..3483
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            3484..3550
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
     exon            3551..4008
                     /gene="Zmynd8"
                     /gene_synonym="Prkcbp1; spikar"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagacggttg cttgaacgtg tgttggcttg gctgaagagg agataaaaac ggagcaggag
       61 gtggtggagg ggatggacat ctctactcgc tccaaagatc ctggctctac cgagagaacg
      121 gcccagaaac ggaaggtccc cagcccccca cattcctcca atggccattc gccccaggac
      181 tcatccacaa gccccattaa aaagaaaaag aaacccggct tactgaacag tagcagtaag
      241 gatcagtcag agctaagaca tggtccgttt tactatatga agcagccact caccacagac
      301 cctgttgatg ttgtaccgca ggacggacgg aatgacttct attgctgggt ttgtcaccgg
      361 gaaggacaag tcctttgctg tgagctctgt ccccgggttt atcacgctaa gtgtctgaga
      421 ctgacatcgg aaccagaggg ggactggttt tgtcctgaat gtgagaagat tacagtagca
      481 gaatgcatcg agacgcagag caaagccatg accatgctga ccatcgaaca gctgtcctac
      541 ctgctcaagt ttgctattca gaaaatgaag cagcccggga cggacgcatt ccagaagccc
      601 gttccgttgg aacagcaccc cgactatgca gagtatattt tccatcccat ggatctttgc
      661 acgttggaaa agaatgcaaa aaagaagatg tatggctgta cggaagcctt cctggctgat
      721 gccaagtgga tcctgcacaa ctgcattatt tataatgggg gaaaccacaa gttgacgcaa
      781 atagcaaagg ttgtcatcaa gatctgtgag cacgagatga atgaaattga agtatgccca
      841 gaatgttatc tcgcagcttg ccagaaacga gacaactggt tctgtgagcc ctgtagcaat
      901 ccgcaccctt tggtctgggc aaaacttaaa ggattcccat tctggccagc gaaagctctg
      961 agggacaaag acggacaggt tgatgcccgt ttctttggac aacatgacag agcctgggtt
     1021 ccagtcaata attgctacct catgtcaaaa gaaatcccct tttctgtgaa aaagactaag
     1081 agtatcttca acagcgccat gcaggagatg gaagtttacg tggagaacat acggaagaag
     1141 ttcggggttt ttaattactc cccgttcagg acgccctaca cccccaatag ccagtaccaa
     1201 atgctgctgg atcccagcaa tcccagcgcc ggcactgcca agacagacaa acaggagaag
     1261 gtgaagctca attttgacat gacggcgtcc cccaagatca ttctgagcaa gccccttctg
     1321 agcgggggcg cgggccgcag gatctccctg tccgacatgc ctcgctcccc caccagcacg
     1381 aactcctctg tgcacacggg ctccgatgtg gagcaggacc ccgagaagaa ggccccatcc
     1441 agccacttca gcgcaagcga agagtccatg gacttccttg ataagagcac agcgtctcca
     1501 gcctccacca agacggggca agcagggagc ttgtccggca gcccgaagcc cttctctcca
     1561 caagcgccaa cgcccatcat gacgaaacct gacaagacct ccaccgccac caccgggagc
     1621 atcctgaact tgaacctgga tcgaagcaaa gccgagatgg acctgaagga gctgagcgag
     1681 tcggtccagc agcagtcagc tcccgtcccc ctcatctctc ccaagcggca aattcgaagc
     1741 cgtttccagc tcaacctgga caagaccata gagagttgca aagcacagct aggcataaac
     1801 gagatctcgg aggacgttta tacggccgtg gagcacagcg actcagagga ttcggaaaag
     1861 tcagagagca gcgacagcga gtacgtcagc gacgaggaac agaagcccaa gaatgagccg
     1921 gaggaccccg aggacaagga ggggagccgg gtggacaaag aggcccctgc catcaaaagg
     1981 aagcccaagc cctcgaacca ggtggaggtc aaagaggaag tgaagagtaa ctcgcccgtt
     2041 ggagagaaag tggaccccgc acccgccaag gacaaggcca gccccgagcc cgagaaggac
     2101 tttgcagaga aagcaaagcc atcccctcac cccacgaagg acaaattgaa gggaaaggat
     2161 gagacagatt ctcccacagt gcacttgggc ttggattcgg actcagagag cgaacttgtc
     2221 atagacttag gagaagatcc ttctgggcgg gagggtcgaa aaaacaagaa agagcccaag
     2281 gtgccgtcgc ccaagcagga tgccataggt aaaccgccac cacccactcc ggccggcaac
     2341 cagtctcccc cagagacgcc ggttctcacc cgctcagcca cgcaagcacc tgcggccggg
     2401 gtcaccgtgg ctgccaccac cagcacgatg tctaccgtca cggtcacagc gccggccacc
     2461 gccgccgtca ccggaagccc agtgaagaag cagaggccgc tcttaccgaa ggagactgtc
     2521 ccagccgtgc agcgggtcgt gtggaacgca tcaagtaagt ttcaaacgtc ctcccaaaag
     2581 tggcacatgc agaagataca gcgccagcag cagcagcagc agcaacagca gcagcaacag
     2641 cagagccaac agcagcagcc tcagtcttcc caggggacaa gatatcagac cagacaggcc
     2701 gtgaaagctg tccagcagaa ggaggtcacc cagagcccgt ccacatccac catcacgctg
     2761 gtgaccagca cacagccggc agccctggtc agcagctcgg gctctgccag taccttagcg
     2821 tctgtgatca acgctgacct gcccattgcc actgcctcag ccgatgtggc tgcggacatt
     2881 gccaagtaca ccagcaaaat gatggacgcc ataaagggga ctatgacaga aatctacaac
     2941 gacctctcca agaacaccac tgggagcaca attgctgaga ttcgaaggct gaggattgag
     3001 attgagaagc tgcagtggct gcaccagcag gagctcgccg agatgaagca caacttggag
     3061 ttgaccatgg cagagatgcg gcagagcttg gaacaggagc gggatcggct catcgccgag
     3121 gtgaagaagc agctggagct ggagaagcag caggcggtgg acgagaccaa gaagaagcag
     3181 tggtgtgcca actgcaagaa ggaggccatt ttttactgct gctggaacac cagctactgc
     3241 gactacccct gtcagcaggc ccactggccc gagcacatga agtcctgtac ccagtcggct
     3301 accgcccctc agcaggaagc ggatgctgag gcaaaccagg aaacaggaaa taagacatct
     3361 cagggcagct cttccaatac acagtcagca ccttcagaac cagccagcac ccccaaagag
     3421 aaagagacgt cgtcatcgtc ctcgaattcc tcctcaacgg agaagagcaa ggacagtaac
     3481 tcgaccctgg acctttccgg ctccagagag acgccctcct ccattctctt aggctccaac
     3541 caaggctctg accattcccg gagcagcaag gcgggtttgt ggagcagcag cgaggaaaag
     3601 cgagggtcat cccgctccga gcacagtgca gggaccagca cgaagaacct catgcccaaa
     3661 gagtcccggg agtctaggct agacaccttc tgggactagg ggtgcattgt gagccagaaa
     3721 cctccctgag tgtgtggggg ggaaacaacc caaacaacag gaagcaacag aaactggaga
     3781 actgccacca cctttagaat tcctaacact caggctctgc ccgtgggctt ggctgcagga
     3841 cagcgacttg actccatgac ttgactccac cccagcttcc accttggccg ggactgctct
     3901 accctgtgag ccaaacactt taggtgtaag taggtacact ttgtgatgtc actgacctag
     3961 tgtacccttt ctttttcata tctatactga ccttaactta taaaaaaaaa aaaaaaaaa
//
