LOCUS       NM_198770               3431 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus zinc finger, MYND-type containing 19 (Zmynd19),
            mRNA.
ACCESSION   NM_198770 XM_231039
VERSION     NM_198770.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3431)
  AUTHORS   Francke,F., Richter,D. and Bachner,D.
  TITLE     Immunohistochemical distribution of MIZIP and its co-expression
            with the Melanin-concentrating hormone receptor 1 in the adult
            rodent brain
  JOURNAL   Brain Res Mol Brain Res 139 (1), 31-41 (2005)
   PUBMED   15950311
  REMARK    GeneRIF: data support the notion that MIZIP might interact with
            melanin-concentrating hormone receptor 1 (MCHR1) in a cell type
            specific manner in vivo, suggesting a role in the regulation of MCH
            signalling in distinct regions of the mammalian brain
REFERENCE   2  (bases 1 to 3431)
  AUTHORS   Bachner,D., Kreienkamp,H.J. and Richter,D.
  TITLE     MIZIP, a highly conserved, vertebrate specific
            melanin-concentrating hormone receptor 1 interacting zinc-finger
            protein
  JOURNAL   FEBS Lett 526 (1-3), 124-128 (2002)
   PUBMED   12208518
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Apr 13, 2021 this sequence version replaced NM_198770.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088093.1, SRR26643429.10661.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-236               JAXUCZ010000003.1  28156314-28156549
            237-296             JAXUCZ010000003.1  28157865-28157924
            297-403             JAXUCZ010000003.1  28158759-28158865
            404-544             JAXUCZ010000003.1  28159427-28159567
            545-725             JAXUCZ010000003.1  28164512-28164692
            726-3431            JAXUCZ010000003.1  28165197-28167902
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..3431
                     /gene="Zmynd19"
                     /gene_synonym="mizip"
                     /note="zinc finger, MYND-type containing 19"
                     /db_xref="GeneID:311791"
                     /db_xref="RGD:735079"
     exon            1..236
                     /gene="Zmynd19"
                     /gene_synonym="mizip"
                     /inference="alignment:Splign:2.1.0"
     CDS             186..869
                     /gene="Zmynd19"
                     /gene_synonym="mizip"
                     /note="melanin-concentrating hormone receptor 1
                     interacting zinc-finger protein; MCH-R1-interacting zinc
                     finger protein; zinc finger, MYND domain containing 19;
                     zinc finger MYND domain-containing protein 19-like"
                     /codon_start=1
                     /product="zinc finger MYND domain-containing protein 19"
                     /protein_id="NP_942065.1"
                     /db_xref="GeneID:311791"
                     /db_xref="RGD:735079"
                     /translation="MTDFKLGIVRLGRVAGKTKYTLIDEQDIPLVESYSFEARMEVDA
                     DGNGAKIFAYAFDKNRGRGSGRLLHELLWERHRGGVAPGFQVVHLNAVTVDNRLDNLQ
                     LVPWGWRPKAEETSSKQREQSLYWLAIQQLPTDPIEEQFPVLNVTRYYNANGDVVEEE
                     ENSCTYYECHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWPAHKKHCRERKRP
                     FQHELEPER"
     exon            237..296
                     /gene="Zmynd19"
                     /gene_synonym="mizip"
                     /inference="alignment:Splign:2.1.0"
     exon            297..403
                     /gene="Zmynd19"
                     /gene_synonym="mizip"
                     /inference="alignment:Splign:2.1.0"
     exon            404..544
                     /gene="Zmynd19"
                     /gene_synonym="mizip"
                     /inference="alignment:Splign:2.1.0"
     exon            545..725
                     /gene="Zmynd19"
                     /gene_synonym="mizip"
                     /inference="alignment:Splign:2.1.0"
     exon            726..3431
                     /gene="Zmynd19"
                     /gene_synonym="mizip"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtccggcggg cgcgaggcgg cggcggtggc ccgatcctgg cccagcctcg tccgcccgtg
       61 gcccgcccgg cctgaccccg gccccggcct gacccggagt gccgcggcct cgctacggcc
      121 cgacccggtc cggtccggag cctcccgagg gagcggctcc gcctgcccag agcgcaggcc
      181 cggccatgac cgactttaaa ttgggcatcg tgcggctcgg ccgggtggcc gggaagacca
      241 aatacacgct gatagatgag caggacatac cactggtgga gagctactcc tttgaggctc
      301 ggatggaagt agacgctgat ggaaacggtg ctaagatatt tgcatatgcc tttgacaaaa
      361 accggggaag gggctcgggc aggcttctgc atgagctgct atgggaacga cacaggggag
      421 gtgtggctcc cgggtttcag gtggtacatc tcaatgctgt gactgtggac aatcgcctgg
      481 acaacctgca gcttgtacca tggggctggc gacccaaagc tgaagagacc tccagcaaac
      541 aaagggagca aagcttatac tggcttgcaa tccagcagct tcccacagac cctatagaag
      601 aacaattccc tgtcttgaat gtgacccggt attataatgc caatggggat gtggtggaag
      661 aggaagaaaa ttcctgtacc tactatgagt gtcactatcc tccttgtacg gtgattgaaa
      721 agcagcttcg agagttcaac atttgtgggc gttgccaggt ggctcgatac tgtggctctc
      781 agtgccagca gaaggactgg cctgcccaca agaagcactg tagggagagg aagcgtccct
      841 tccagcatga gcttgagcca gagcgatgac gggctgaaga gctgccactg ctgcgggttc
      901 acagtttcca gctcatcatg agcacagtgg aagacagact ggcagttgaa cctggaggtg
      961 ccaaagaagc cagcaatgga tccagagaag ctgccataag acctcacagc aacaagcagc
     1021 ctgtggggac actgcccctc cagttttcac ctccagcaga gacaacgggg aggctcccta
     1081 ggacctttct cattatttat atgttaatat gtttgtaaac tcatgtacag tttttttggg
     1141 ggggaggcaa ggggagggtt agcaacttca aatagaatca tttgttgtat tcctcaaatg
     1201 gtaaacagac accactcagc tagagactgt tgtgtagtcg agcttcgctc ctgggcagtg
     1261 gggagggggg tccccactga aaggcttgca cagagtcatg tctaaacagg cagagtaaag
     1321 gtagaatcat ttttgtggcc agtttctgct cctcagaccc ctgttgtcca gcccttttct
     1381 tttgagacag ggtctctcct ggaacttcat aggtaaacca ggctggcctt gaatacacag
     1441 atccacctgc ctttgcccca tgagtgctgg gattaacaga cccggctcac cttttttttt
     1501 ttttgtttag ttgaaaggaa ctaattttaa tgaagctagt tttaatgaat ggtctgggag
     1561 gacttgccca tcactccagg ttggcctcga gggcagagta tgttatggag gagtgcaagg
     1621 aaggctctgt tctctctggt ggcaggtgtt ctgaagtgtt ccagtaggtt ggctacttgt
     1681 catagttgtt attgctgtga taaaacatga gcaaaagtaa cctgggaagg aggaattatt
     1741 tcagcttaca attccacatc accgtccagt gaaggaagtc aggactagag ctgacggaga
     1801 ggctatggag aactgctact tactgtttgc tcttcgtgtc ctgctcagcc gagcttcttg
     1861 tagtgcccag aattgccagc ccaggggtgg cattgcacaa agtgagctag gccctcccag
     1921 atcaataaag aaaaatcagg acagactgac ccacaaacca tctaatctag tggggccatt
     1981 ttcataattt tcctctccca aaatgactcc tgtttgtatt aagttgacat aaaactaacc
     2041 agcaaaatac tatatatccc tatgttggtg aactgccact ttgaagcaca gagacccttg
     2101 gagccagtag taagctgctg ctcctgtccc aattgtggga tggcaaagac agtgggggtg
     2161 ccagaaagcc aaagggagac ttcactgcag agctgcagtc cctaggaact tttttggggg
     2221 atccacattc tgaggactgt ggcattttga ccatttgcag aaatgaattc aactgtgact
     2281 ggaatcttcc ctaactcggt gtgaccctct tgttccagct ctccctgact gctgacctgg
     2341 gcagctctct ggccttctgg gtggtctaca gtgcccctcg ggagttaagc tcttcctatt
     2401 gcagcttatc tatcacagtc ttggttttct gtgagctaaa tgctctctgg ctgagcacaa
     2461 ccccttgata gccttaggcc tctgagtcca gcttctatgg ctgattgtgc ttttatggta
     2521 catagtggcc tagaggggaa gattgaaact cagcatggca ccatcccttg agtgtttaaa
     2581 ctcagagagt tgcttatgtc agacctatac caggaaccct tttgtgttct gaaggtcccc
     2641 tactcagacc ccaggttgaa catcaatctg atgtcattgg aaagaggaca gatgtatata
     2701 ttgtaaaata ttgctatagg cagcagctga cgtacgccct cactgtctcc ccttgcataa
     2761 actactttta agaggccagg gctattgtag taaagggatt ctgtgggtca aatttcttgg
     2821 gatgactcta gactacaagt ttgtgatctt tcctttaaat ggccaggtta gcactttgtc
     2881 ccctcgccag caatgggtgc tttactgtca gctttgatca gaagattcca cctagagagc
     2941 acacagctga cctcaaggca ctgctggtaa aggtggcata cattgggctc acctgtgggt
     3001 ttcccctatc tacacttggt agcacagcta gtgctgtgca gtgagctggg gtctatcaag
     3061 tcgatgttta ctccccatgt ctgttcatcc ctgacctccc tccctctggt catccctgcc
     3121 tcatgttctt tagctgttta ggctgttcta tgaatgttct ggtggttcaa agatggggcc
     3181 ctttggcttg tgtagtgagt tggtctactt ggccttggga caatctaatg ctggagggat
     3241 tggggtcttt tcagaattcc ttaggtgcca cccttgcttc agctgctaac tggcctgcaa
     3301 gctaggctat acagccatac tctgcttcag ttccagggct ggatacccag gtgtcctgtg
     3361 aatttgcttc ctggaactgc tgtaactaag tgccaaaaac tggatggact aaaacgagct
     3421 ttttgtctgt t
//
