LOCUS       XM_008771708            4037 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger, MYND-type containing 11
            (Zmynd11), transcript variant X12, mRNA.
ACCESSION   XM_008771708
VERSION     XM_008771708.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008771708.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008771708.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4037
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4037
                     /gene="Zmynd11"
                     /gene_synonym="BS69"
                     /note="zinc finger, MYND-type containing 11; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 73 ESTs, 4 long SRA reads, 16 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 197 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:291259"
                     /db_xref="RGD:1303252"
     CDS             187..1995
                     /gene="Zmynd11"
                     /gene_synonym="BS69"
                     /codon_start=1
                     /product="zinc finger MYND domain-containing protein 11
                     isoform X8"
                     /protein_id="XP_008769930.1"
                     /db_xref="GeneID:291259"
                     /db_xref="RGD:1303252"
                     /translation="MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRV
                     HGMHPKETTRQLSLAVKDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETETHDWY
                     CFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSHWQCPVCRSIKKKHSNKQEMGT
                     YLRFIVSRMKERAIDLNKKGKDSKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKA
                     DAQLLLHNTVIFYGADSEQADIARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYP
                     CIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSENIQDITVNVHR
                     LHVKRSMGWKKACDELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKATQE
                     PRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIERVSVSTQTKKLSASSPRM
                     LHRSTQTASDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEE
                     KRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLAAQHKQLISQTKKKQWCYNC
                     EEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRRKR"
ORIGIN      
        1 ggggaaacac tcaagcgcac acaatgaact ctgaggaggc cgcgagctgg gccggccgcc
       61 gcgcccgcac cgtgtgaacc gcctcttagt ggggatgcca actttgcccc ccgggcgtcc
      121 tctgcagccc cgcaggcccc gcgccgccgt cgggctgagg agacgcgcta aagaagtaaa
      181 caggtcatgg cacgtttaac aaaaagacga caggcggaca caaaagctat ccagcatctt
      241 tgggcagcca ttgaaattat caggaatcag aagcagattg ccaacattga tcgtattaca
      301 aagtatatgt cccgggtcca cggcatgcat cccaaagaga ccacgcggca gctgagctta
      361 gctgtgaaag atggtctcat tgtggaaact ctaacagtgg gctgcaaagg ttcaaaagct
      421 ggcattgaac aggaaggata ttggttacca ggagatgaga ttgactggga aacagaaact
      481 catgactggt attgttttga atgccatttg cctggagagg tgttgatatg tgacctgtgt
      541 tttcgtgtgt atcattccaa gtgtttgtct gatgagttca ggcttagaga cagcagtagt
      601 cactggcagt gcccagtttg caggagcatt aagaagaagc attctaacaa gcaggagatg
      661 ggcacctacc tgaggttcat cgtctcccgc atgaaggagc gggctataga ccttaataaa
      721 aaaggaaagg acagtaagca cccgatgtac cggagactgg tccactcagc tgtggacgtc
      781 cctaccatac aagagaaggt gaatgagggg aagtaccgga gttatgagga gttcaaggct
      841 gacgcacagc tgcttctcca caacacagtg atcttctatg gagcagacag tgagcaagcg
      901 gacattgcaa ggatgctcta taaagacacg tgtcatgagc tggacgagct gcagctttgc
      961 aagaactgct tctacctgtc aaacgcacgg cccgacaact ggttctgcta cccttgcata
     1021 cctaatcatg agctggtttg ggctaaaatg aaaggttttg ggttttggcc agccaaagtc
     1081 atgcagaaag aagacaatca agttgatgtt cgcttctttg gccatcacca ccagagggcc
     1141 tggattcctt ctgaaaacat tcaggacatc acagtcaatg ttcaccgact gcatgtgaag
     1201 cgcagcatgg gctggaaaaa ggcctgtgat gagctggagc tgcatcagcg gttcctccgt
     1261 gaagggaggt tctggaagtc taagaatgag gaccgaggtg aggaagaggc agaatccagt
     1321 atctcctcca ccagtaatga acagctgaag gccactcaag agccaagagc aaagaaagga
     1381 cgacgtaatc agagtgtgga gcccaaaaag gaagaaccag agccagaaac ggaagcagta
     1441 agttccagcc aggaaatccc cacaatgcct cagccaattg agagggtgtc agtgtcaacc
     1501 cagaccaaga agttaagtgc ctcttcccca agaatgctgc accgaagcac tcagacggcg
     1561 agcgatggcg tctgtcagag catgtgccac gacaagtaca ccaaaatttt taatgacttt
     1621 aaagacagga tgaagtcgga ccacaagcgt gaaacagaga gagtggtgcg ggaagcgctg
     1681 gaaaagttgc gttctgaaat ggaagaagaa aaaagacaag ctgtaaataa agctgtagcc
     1741 aacatgcagg gtgagatgga cagaaagtgt aagcaggtga aggaaaagtg caaggaagaa
     1801 tttgtagagg agatcaagaa gctagcggcc cagcacaagc agctcatttc tcagaccaag
     1861 aagaagcagt ggtgctacaa ctgtgaggag gaggccatgt accactgctg ctggaacacg
     1921 tcctactgct ccatcaagtg ccagcaggag cactggcacg cagagcacaa gcgcacctgc
     1981 cgccggaaga gatgagcctg cctgccaccc tcacacacag cggtttttgt tcccaagaag
     2041 ccaaaattgt ttagaatttg cttcccattt tgcaccagcc tttaaacact tttcgtggtg
     2101 aaattttgca cagtagttta aatcttttgt taatgctcct ccggcatttt tcgggggctg
     2161 aagtaacatc aatggagggt attactctaa ataaatctaa ttgaggattt gttgcatttt
     2221 cagcaaattt taaaaacatt tttaggtttt acagaaattt taacctttaa acaacagatc
     2281 ttaaaaaaaa aacaccgaca ggtgaatacg agtgagtcta acagagacgg aacagagctg
     2341 aatgtaagag cagcagatgc ttcagaagaa cagactacct ggccgtgacc tggccgtgac
     2401 ctcgctgagc tggtgttgtg cagctggctc acgctcacag gccttgcctg tggctgtgct
     2461 ggcggcctgt gattgaatat agggaacagg gttgacacag cagggctagc cctgcatatt
     2521 ttttcttaaa tatttcccaa ttgtgttttc attatttctt ttcaatatat aacttttata
     2581 acaaattatt agctttgatc ttgtagttta aaattgcagg gaaactgggg taatctttta
     2641 ctgagctgga tcttagagaa aaatgaatat ttaaatttta aagtttgcac atttcatctt
     2701 tgtcccgagt gcttgtaaca aaatcagcag caaaaacaaa catcaaaagc caaaaactac
     2761 ctgtactcag aacacggaat tacagctgag gcatacaagt ttataactga gtcccctccc
     2821 tccccggtgc caccctaacc cagccctgtg tctcctcaga ggagagagca cttgcgggtc
     2881 acagaagccg ttgtgttgta gggagggtca ttgctactaa cgaactccat cactgtacac
     2941 agtgagaatg catgctactt tccttgtatt aaagataccg tgatttgtat aaagtctgta
     3001 ttctgcgggg tgtctggtta agaagcatta ctggtaggaa tggatcgata gttgaataac
     3061 atttttttat acatagatat ataaaagaca accaggaaaa ttaaaattct ttaaaactat
     3121 ctcaccaatt gtttttgttc tcctccaaga cccaccacag accaagccaa attcccactt
     3181 tactctttag ttatttttga ggttagagaa ataatttgta aatatttatt tagacctttg
     3241 atatttatta aagcaattac tcacaacaga agtgaaggag tcaggagaaa agcctttaag
     3301 acagttttct ccggtccatc agggtcactc taaagatgaa aggaaggagc gtctgtgaga
     3361 cctcctccac cggtgcccat gctattgcag acggtgtaac tactgccaca cgggctcgct
     3421 cttttgtaca acccacccat ggcccatgag ctcccgccag gttttccggc aactgcaata
     3481 gctcggcacc accgccccct cctcgctgcc gttcccatcc ctgctgctgc gctgcctgaa
     3541 caaggacact tgacagtctt tggttgtttc caggttgtca gacgtcgatc cacccctgtg
     3601 agagcaagtc attgtgggaa tattttggtg tgaaatcatt ccagagtatg tactatttac
     3661 ctgatagctg catgaaagtg aggttcctgt tactttggct tcttgtctct gtcgacacgg
     3721 ctgcacattt ccaagttact acagtgtgaa aactgtgtgt taaaaaaaaa acaaaattaa
     3781 aaaaagagat tgtggcctgg ttttgtaaaa gttttaggta aaattacaat tgattgtttt
     3841 aggaatcatt aaaattttct gcaatcataa agctatatca aggtgttgag tttagccact
     3901 ctgcacattg taagtaccca tcgtggctgt ccagttctat gatgcgttct ggcattttgt
     3961 aagctgctct gactagcaat atatagattt catttactgt gttaacattg gttaataaat
     4021 gtatttaaaa aacccaa
//
