LOCUS       XP_038949778             628 aa            linear   ROD 22-FEB-2024
DEFINITION  zinc finger MYM-type protein 5 [Rattus norvegicus].
ACCESSION   XP_038949778
VERSION     XP_038949778.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_039093850.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086033) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Aug 6, 2024 this sequence was replaced by
            NP_001419959.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..628
                     /product="zinc finger MYM-type protein 5"
                     /calculated_mol_wt=70198
     Region          214..250
                     /region_name="TRASH"
                     /note="metallochaperone-like domain; smart00746"
                     /db_xref="CDD:214799"
     Region          304..338
                     /region_name="zf-FCS"
                     /note="MYM-type Zinc finger with FCS sequence motif;
                     pfam06467"
                     /db_xref="CDD:428958"
     Region          344..382
                     /region_name="zf-FCS"
                     /note="MYM-type Zinc finger with FCS sequence motif;
                     pfam06467"
                     /db_xref="CDD:428958"
     Region          529..>596
                     /region_name="ZnF_TTF"
                     /note="zinc finger in transposases and transcription
                     factors; smart00597"
                     /db_xref="CDD:214739"
     CDS             1..628
                     /gene="Zmym5"
                     /coded_by="XM_039093850.2:278..2164"
                     /db_xref="GeneID:305911"
                     /db_xref="RGD:1306353"
ORIGIN      
        1 meahledaes sdgpsssvgs tarytpvedd dvvfvesvqp avcgpavsne rnliftsskh
       61 enprgnystv ppssrdltfh kgnicetiii ddegdtetng geernptnfi ewgphgnkns
      121 tktvdfpias lsrsktktav gpfnpgridi tdefhngrfa vhpnpdscis qsasfprnqk
      181 qqgadslspv aslpkqnfqp snqhltkpan kiicancknp lqkgqtayqr kgsahlfcst
      241 tclssfshkr trktrsamck kdspvkptti vppvessksl refhsaspsp yencqslrke
      301 vftksrciic nklgevrhei svnsithklc snscfneyrl tnglimncce qcskympkst
      361 ghsilitgqq krfcclscad eykeimeaks killlqnrkr naireenekk lyessktlsg
      421 ntgeipekke kiseiikvaa dcsldtssee rnvnlpcsva avsdkfqeql gdknseefda
      481 svvlsldpgs wprilnmkqr eflvkteppq vrnfnfpkds igkkfsetyy tqilpngekt
      541 trswllysvs kdsvfclycr lfgegknqlr nengckdwhh lshilskhee semhinnsvk
      601 yskfksnlqn ktneategge nivqllyi
//
