LOCUS       NM_001107983            3395 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus zinc finger MYM-type containing 1 (Zmym1),
            transcript variant 1, mRNA.
ACCESSION   NM_001107983 XM_001058926 XM_233535
VERSION     NM_001107983.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001058926.1, XM_233535.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMD00132261, SAMD00132262
                              [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..3395
                     /gene="Zmym1"
                     /note="zinc finger MYM-type containing 1"
                     /db_xref="GeneID:313604"
                     /db_xref="RGD:1307027"
     exon            1..151
                     /gene="Zmym1"
                     /inference="alignment:Splign:2.1.0"
     exon            152..307
                     /gene="Zmym1"
                     /inference="alignment:Splign:2.1.0"
     exon            308..542
                     /gene="Zmym1"
                     /inference="alignment:Splign:2.1.0"
     CDS             349..3336
                     /gene="Zmym1"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger MYM-type protein 1; zinc finger, MYM domain
                     containing 1; zinc finger, MYM-type 1"
                     /codon_start=1
                     /product="zinc finger MYM-type protein 1 isoform 1"
                     /protein_id="NP_001101453.1"
                     /db_xref="GeneID:313604"
                     /db_xref="RGD:1307027"
                     /translation="MLPAVPGTAAQLSCSSCRRVFQEGQTAFQRKGSAELFCSRLCID
                     GCPLPAMSPAPLKRMCLNCSRDILNLKDMKSVRLEDSSCNKNFCSQSCLTSYEEKRKP
                     CVTVYTESTLPKCSMCQRTSTKPPRILRSFPCKSLKLSDEMIVITNDLGNLEIFCSVC
                     FSSYNSAVMESSSVNVSMVHSASKENVCPKKYPVISSIMSLVNNRADLVVNTDLLQGT
                     LSSVPTNVIVNSSASESSSGVGNSVDQPSLPPPSSVLGEDKAAPSEEVQNNSETNQDP
                     TYSMTSVKGNDQPCFSKSTSTEQKIKSEPQPAGELWSPGSQHLRPSTANEIAFCYSCY
                     LFYQKKVSCRREAFATKGAAADWERMLENFRRHEESEGHLKSLRFWRQCQFLDAVPHN
                     DSSVYSKQIEGNKKYLQLVIENILFLGKQCLLLKGNDQSISSINKGNFLELLEIRARD
                     KGEVSRLMSSHIDFYSSTLVQEEIIEIIKGEMLQDIVSEINASSAFSIICEEVAGSGA
                     ERQLSVCVRYAQKLPSAVFVKERFLGFVTAEEVTGAHVHRRIKAYLQQVGVDFNKICG
                     QAYDSATNFRVKLNEVVTEFKKEEPRVLYVHCHAHFFELAVLSFCKEVKELRSALNTL
                     GSLFNTVRVSGEMLASLQTVCKLSLNKTCKKHASQSCWPAHDHLLLAVTDCLPEIVGM
                     LESVSRHSSGTGVAAELEDLLAMVTKFEFIFCLKFLYRILSITGILSREFQSETVDIF
                     SLFSKIEAILECLSSERNDTYFKTIWDGADEISKKITSKGFDIEKPSFQKRRKIQRTV
                     DPCNSEHMIFPTSADEQYKINIYYQGLDTVLKSLKLYFSEFDYCKMKQISELLLKWNE
                     PLNEATAKHIQEFYKLDADIIPELRFYRQYASLNFVTRNGSLSFIDLGCLFIQHGLHN
                     NIPCITKLLHIALSWPITSANNEKSFSTLPHLKAYLLRTTGQEKLSSLALIAVEQELV
                     NKLMEPERLTGMVEKFISQMKDK"
     exon            543..717
                     /gene="Zmym1"
                     /inference="alignment:Splign:2.1.0"
     exon            718..868
                     /gene="Zmym1"
                     /inference="alignment:Splign:2.1.0"
     exon            869..997
                     /gene="Zmym1"
                     /inference="alignment:Splign:2.1.0"
     exon            998..1035
                     /gene="Zmym1"
                     /inference="alignment:Splign:2.1.0"
     exon            1036..3395
                     /gene="Zmym1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagccggcgt ggttgtttgc actgcgaaac ccgagtgggc gcttcccgcc gctgggttgg
       61 tgatagatta tccgtcctcg tggagtcgct cagggccgct tttccagaga gaggtggcgt
      121 ttttccggtc ctgaggaggg tgacgcgaca gtttcaacac accacatgta tgcgagagct
      181 ggaggaggcc ggaagctggg gttgcatctc ttgatgctgg agctacagat gctgggaact
      241 gaacccaggt cctctgtaag agtaacaaag tgcccttaac cagtgagcca cccttctagt
      301 cctaaatctc cacagccgac atctctgttc tcacctgacg tgagtaaaat gcttcctgca
      361 gttccaggca cagctgctca gctttcctgt tccagttgta gaagagtctt tcaggaggga
      421 cagacagctt ttcagaggaa agggtctgct gagcttttct gctcgagact ctgcatcgat
      481 gggtgccctt tacctgctat gtccccagct cctctcaaaa gaatgtgctt aaactgctca
      541 agagacattt taaatctaaa ggatatgaag agcgtccgat tggaggatag cagttgtaac
      601 aaaaactttt gtagccagtc ttgtcttaca tcatatgaag aaaaacgaaa gccatgtgtt
      661 accgtatata ctgagagcac tttgcctaag tgcagcatgt gtcagaggac atccactaaa
      721 ccacccagaa tacttagatc ttttccttgc aaatcactga aactatcaga tgagatgatt
      781 gtgattacta atgacttggg gaacctagag attttctgct ctgtttgttt ttcttcatac
      841 aacagtgctg tgatggaatc ttcttcagtt aatgtttcca tggtgcacag tgcttcaaaa
      901 gagaatgtct gtcctaagaa atacccagtc ataagcagta taatgtcatt agtaaacaat
      961 cgtgctgacc tggtcgtgaa tactgatctc ttacaaggta cactttcttc tgtacctaca
     1021 aatgtcattg tgaacagctc agccagtgag tccagcagtg gtgttggaaa tagtgtggac
     1081 cagccaagcc tccccccgcc ttcctctgtg ctcggtgagg acaaagctgc tcccagtgag
     1141 gaggtccaaa acaacagtga gacaaaccag gatcctacat atagcatgac atccgtgaaa
     1201 ggaaatgatc agccatgttt ctcaaagtct acatccacag aacagaagat taagagtgag
     1261 ccacagcctg ctggagagct gtggagccca ggttcccagc atctgcgtcc cagtactgcc
     1321 aatgagatcg ctttctgcta ttcttgctac ttgttctacc agaaaaaagt cagctgtcgg
     1381 agagaagctt ttgcaaccaa aggagctgct gctgactggg agagaatgct ggaaaatttc
     1441 agacggcatg aagaaagcga agggcactta aagtccctgc gattttggag gcaatgccag
     1501 tttctcgatg ccgttccaca taacgattca tctgtttatt caaaacagat tgaaggaaat
     1561 aaaaagtacc tacagctcgt cattgagaac attttatttc ttggaaaaca gtgcttgctc
     1621 ttaaaaggaa atgaccagtc tatttcgtcc attaataaag gcaatttttt ggaattacta
     1681 gagattagag caagagataa aggagaggtg tctcggctta tgagttcaca cattgacttc
     1741 tatagtagta ctcttgtcca ggaggagatt attgaaataa taaagggtga aatgttgcaa
     1801 gacatcgtga gtgagatcaa cgcctcctca gccttttcaa taatctgtga ggaggtagct
     1861 ggcagtggtg ctgagagaca gctttctgtg tgtgtgaggt atgcacaaaa attgccaagt
     1921 gctgtcttcg ttaaagagcg gttcctgggg ttcgttactg ctgaggaggt gactggggcc
     1981 catgtacaca ggcgtatcaa agcttacctg cagcaggtcg gagttgactt taataaaata
     2041 tgcggccaag cctatgatag tgccacaaat tttagggtaa aactgaatga ggttgtaaca
     2101 gaattcaaga aggaagagcc aagagttctg tatgtgcatt gtcatgcaca tttttttgag
     2161 ttagccgtgc ttagcttttg taaggaggtg aaggagctcc gcagtgcgct aaacacgctc
     2221 ggctctttgt tcaacactgt ccgtgtgtct ggagaaatgt tggcaagttt gcagaccgtg
     2281 tgtaagctaa gtctgaataa gacttgtaaa aagcacgcat cgcagtcctg ttggccagcc
     2341 cacgaccact tgttactggc tgtgacagac tgccttccag agatcgtggg aatgctggag
     2401 tccgtgtcgc gccactcctc aggcacaggc gtggctgcgg agctggaaga tttgttggcg
     2461 atggttacca agtttgagtt tatattttgt ttgaaatttc tttatcgaat actcagtatt
     2521 acagggattc tttctagaga gtttcaaagt gaaactgtag acattttttc tttgttttca
     2581 aaaatagaag cgattttgga gtgtttatct tctgaaagga atgatacata ttttaaaact
     2641 atctgggatg gagcagatga aataagtaaa aagataacca gcaagggttt tgatattgag
     2701 aaaccctctt ttcaaaaaag aagaaaaatt caaagaacag tagatccctg caactcagag
     2761 catatgattt ttcctacttc agcagatgaa caatataaaa ttaatattta ctaccaaggt
     2821 ttggatactg tattaaaaag cttaaagtta tatttttcag agtttgacta ttgcaaaatg
     2881 aaacaaattt ccgagctgtt actcaagtgg aatgaaccat taaatgaagc cacagccaag
     2941 cacatccagg aattctataa acttgatgca gacatcatcc ctgagctaag attttaccgg
     3001 cagtatgcaa gtctcaactt cgtcacacgg aatggttcct taagcttcat tgacctgggc
     3061 tgtctgttta ttcagcacgg tctccacaat aatattcctt gtatcacaaa actgttgcat
     3121 attgctttat cttggccaat tacttcagca aataatgaga agtcattttc cacactgcct
     3181 catcttaaag catacttact tcgtaccacg gggcaagaga agctcagtag ccttgctctg
     3241 atagctgttg agcaggaact ggtaaataaa ttgatggaac ctgaaagact cacgggaatg
     3301 gttgaaaagt tcattagtca aatgaaagat aaataagaca aacttgcaac tttgagctca
     3361 attaaaaaga attctgtggt tttattagaa tccta
//
