LOCUS       NM_001100574            8811 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus zinc finger with KRAB and SCAN domains 8
            (Zkscan8), mRNA.
ACCESSION   NM_001100574
VERSION     NM_001100574.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 8811)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence because no single transcript was available for the
            full length of the gene. The extent of this transcript is supported
            by orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.524596.1,
                                           SRR26360186.1909423.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-168               JAXUCZ010000017.1  47735120-47735287
            169-668             JAXUCZ010000017.1  47739296-47739795
            669-837             JAXUCZ010000017.1  47741019-47741187
            838-929             JAXUCZ010000017.1  47743962-47744053
            930-1053            JAXUCZ010000017.1  47744379-47744502
            1054-8811           JAXUCZ010000017.1  47745369-47753126
FEATURES             Location/Qualifiers
     source          1..8811
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..8811
                     /gene="Zkscan8"
                     /gene_synonym="Zfp192"
                     /note="zinc finger with KRAB and SCAN domains 8"
                     /db_xref="GeneID:306974"
                     /db_xref="RGD:1308983"
     exon            1..168
                     /gene="Zkscan8"
                     /gene_synonym="Zfp192"
                     /inference="alignment:Splign:2.1.0"
     exon            169..668
                     /gene="Zkscan8"
                     /gene_synonym="Zfp192"
                     /inference="alignment:Splign:2.1.0"
     CDS             249..2015
                     /gene="Zkscan8"
                     /gene_synonym="Zfp192"
                     /note="zinc finger protein 192"
                     /codon_start=1
                     /product="zinc finger protein with KRAB and SCAN domains
                     8"
                     /protein_id="NP_001094044.1"
                     /db_xref="GeneID:306974"
                     /db_xref="RGD:1308983"
                     /translation="MATESRKPSSAPSPPDQAPEEDLVIVKIEEDHGWDEESSVHENN
                     IPGQELFRLRFRQLCYQETLGPREVLIQLRALCHQWLRPDLNSKEQILELLVLEQFLT
                     ILPKELQTLVKEHQLDNGEEVVTLLEDLERQINVLGQPVSAHTHGHRVLWDEVIPSKS
                     ASEPPSIHVQPMATMPKSPVPQKPHDRGERPDFTYKAMSSSQKPTPSQKGSSGDQEVT
                     ARLLTAGFQTLEKIEDMAVSLIREEWLLDPSQKDLNRDNRPEKYRNMFSLDGETRNEN
                     KELFSKQVISPRIQPHGEATAKCNGDIIVGLEHGETQDLLGKLERHQGNHTQEKRHKC
                     DECGKSFAQNSGLVRHWRIHTGEKPYQCNVCSKAFSYRSALLSHQDIHNKVKRYHCKE
                     CGKAFSQNTGLILHQRIHTGEKPYQCNQCGKAFSQSAGLILHQRIHSGERPYECNECG
                     KAFSHSSHLIGHQRIHTGEKPYECDECGKTFRRSSHLIGHQRSHTGEKPYKCNECGRA
                     FSQKSGLIEHQRIHTGERPYKCKECGKAFNGNTGLIQHLRIHTGEKPYKCNECGKAFI
                     QRSSLIRHQRIHSAEKPETTGV"
     exon            669..837
                     /gene="Zkscan8"
                     /gene_synonym="Zfp192"
                     /inference="alignment:Splign:2.1.0"
     exon            838..929
                     /gene="Zkscan8"
                     /gene_synonym="Zfp192"
                     /inference="alignment:Splign:2.1.0"
     exon            930..1053
                     /gene="Zkscan8"
                     /gene_synonym="Zfp192"
                     /inference="alignment:Splign:2.1.0"
     exon            1054..8811
                     /gene="Zkscan8"
                     /gene_synonym="Zfp192"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtggctgtg gggcaagttg cgtgctggcc cactctgagg ctccgagggt ttggaagtta
       61 gcggctggag ggggtcccgc tcgggttcgg tgtcggtcgc gattcctcgc gcgcttcctg
      121 gtccgcgctg tgcggcctcc cgccctcggg cagcgtgggg agctctcgaa ataccctgga
      181 agtccttgga agacttttaa gatacagaag atagagggaa ggggtcttct gagcttttct
      241 gctcctaaat ggctacagaa tcaagaaagc cttcttcagc cccatctcca ccagaccagg
      301 ctcctgaaga ggaccttgtc attgtcaaga tagaggagga tcatggttgg gatgaggaat
      361 ctagtgtgca tgagaataac atacctggcc aagaactatt tcgcctacgc ttcagacagc
      421 tctgctacca ggagacatta ggacctcggg aagttctgat ccagctccgt gcactttgcc
      481 atcagtggtt acggccagac ttgaacagca aagagcagat ccttgaactg ctggtgctgg
      541 aacagttcct gaccatcctg cctaaggagc tgcagactct ggttaaggag caccagttag
      601 acaatggaga agaggtggtg accctgttgg aggacctgga aaggcagatt aatgtcctag
      661 ggcaaccagt ctcagctcat acacatgggc acagagtact ctgggatgaa gtcatacctt
      721 caaaatctgc atcagaacct ccaagtattc atgtccaacc catggcaacc atgcctaaat
      781 ctcctgtgcc ccagaagcca cacgacagag gagagaggcc agatttcact tataaagcca
      841 tgtcttcttc tcagaaacct actccttccc aaaaaggaag ttctggagat caggaggtga
      901 cagctagact tctcactgca gggttccaga ctttggaaaa gatcgaagac atggctgtgt
      961 ctcttattcg agaggaatgg cttcttgatc catcacagaa ggatctgaat agagataaca
     1021 gacccgagaa atacagaaat atgttctccc tggatggtga gaccaggaat gagaacaagg
     1081 aactattttc aaaacaggta atatctccca gaatccagcc acatggagag gcaactgcca
     1141 agtgcaacgg ggatattatc gtgggtcttg agcatggaga aacccaagac cttctgggca
     1201 agttagagag gcatcaggga aatcacacac aagagaaacg acataaatgt gatgaatgtg
     1261 ggaaaagctt tgctcagaac tcaggccttg ttcgccactg gagaatacac actggagaga
     1321 aaccctatca gtgtaatgtg tgcagtaaag ccttcagtta caggtcagcc cttctttccc
     1381 atcaggatat ccacaacaaa gtgaagcgct atcactgcaa agaatgtggt aaggccttca
     1441 gtcagaacac aggcttgatc ctgcaccaga gaatccacac tggggagaag ccctatcagt
     1501 gtaatcagtg tgggaaggcc tttagtcaga gtgcaggcct tattttgcac caaagaatcc
     1561 acagtgggga gagaccatat gaatgtaatg aatgtggaaa agcattcagt catagttcac
     1621 acctcattgg acatcagaga attcacactg gggagaagcc ctatgagtgt gatgagtgtg
     1681 ggaaaacctt cagacggagc tcacatctta ttggccatca aagaagccac actggggaga
     1741 aaccctacaa gtgcaatgag tgtgggaggg ccttcagtca gaagtcaggc cttattgaac
     1801 accagagaat ccatactgga gaaagaccct ataagtgtaa agaatgtggg aaagctttca
     1861 atgggaacac tggtctcatt cagcatctaa gaatacatac tggggaaaaa ccctacaagt
     1921 gcaatgagtg tgggaaagcc tttattcaga gatcaagtct cattcgacat cagagaatcc
     1981 acagtgcaga aaagcctgaa accacaggcg tttaggagaa gctttggctg tagtttgagc
     2041 tttattcagc attagagaaa ccatgtaata gtggaaaagt ctagtagaaa agggcagaat
     2101 ctgtagctgt aacaaagcta agaatagcat ttggctagtt tgggcccaat ccctgatagg
     2161 agttgattag tttgactgtc gttggggtca cctgatgaca cagagcctta gcagcttagt
     2221 atagtcttta gaattacagc aaattgctta ttgtgacttg aaacactata ttttatcttt
     2281 cctaagagta gctataagga gagaggccac tccttcaagc ttctctgttt cttcccattt
     2341 cctgtggtcc ttttttatca tccataaggt gccctggtaa atcctaatct aacagctgct
     2401 tgagtccaag gcaacctcaa caagactaag atttgtgttt gactttttta atatccgatt
     2461 tagaaattgt aagacattta aattgttcta atactcctag atgataaata tccatattcc
     2521 tctacaaact taatgctata tttttaacag ccctgtagca gttttcttca tttagaatct
     2581 ttactgactc cattgagtcc ctgagcatct gtacatatcc ttcaccaccc ccagtctcag
     2641 tacctgtgtc aacaaaggaa gtggacgcat tagtgatgat ggtgggcgtg atggaaagac
     2701 agaggtgagt ggagactcag cctggctatt cttgagcatg gacagttgtt tctcaaggtg
     2761 acttctgact ttccttccac ctacccatta tacactgtgg tttcaaaaat atttgcacta
     2821 tcaaaacttt ggcacacata aaagacagag gtgcttgaaa gagacattaa aaatccttac
     2881 aaagaatgtt catcatccct cttggcccat tacagtactg ctctcaggtt tctatcagtc
     2941 tatataaagt cactgacttc atgatgagct tggaccgact tgcttagatg gccactacag
     3001 agccgtcatt atcttccatc tgtttccttc cattcacata tctccagtat ccaccgtggt
     3061 aatctgtcaa atacccaact ctgactcctc attcttctac attctggtat actccattag
     3121 tcatctaaca acaaaaatac actattacac tcattgtcac caggcactgt attttacctc
     3181 aaaggctttt agcataacat agaatactgt atatgtaaag taatgagact ggttttaaag
     3241 gaacacatca gatcttgtac atctaaaatg tagtgtcttt tcaattgaat aattatattt
     3301 actacttaat aaacacttgt taaaatgcat attctaaagt actatgattc tagtagtgct
     3361 actaatcact actgagaggc aaatattggg aacaatctta gaattctcat gtaatgagca
     3421 agaaaaccat ctgttactat tacttttatt tcatgtttga ccatttgact agacatgggc
     3481 ttggagttga ataacttttg ctttgcaaca ttaatcctca cacttaaaat tattccattg
     3541 ttcttactca gaagacacat cagtaggttc tgatgaaatc tctgaaaaaa ataattccac
     3601 accgtgactg tcctgaaaag gatcatcttc gtttctttga ttaactttct cagaacagac
     3661 ctctccatta ttcgttaatt ttttatcctc cgtcctgtcc tgtttgcttc cttcctattt
     3721 aatacagatt aggttcccaa ctcctctcta gcactcctca ctgagccatc tctccagccc
     3781 caataacttt ttttaaagac ggggttgcac atgtttaaga aaccagaagc agataaatct
     3841 gcctatattg agacccttgc ttcctgcttg agttgtgcct taccctctat aagacagggt
     3901 atcggcatag gtaagttcta tgttatgcgg aagttacata gggtgagtac attttcagag
     3961 cagttagatg tctgcatgtg tgcatagatg catgcccact tctttcgtat acttttgtgc
     4021 agcacctgct ttgatttcta ataaaattgc cctttatgca tttgtaccca gagtaacatt
     4081 agcagatact tcagcctcag gattactagg catctggcag aagtccagag aaaagaaaat
     4141 ataatcagga agattaatta ctgggttgaa tgtggaaaag aatgatcatt taaaaaccag
     4201 ttaatggagc cattatggtg aggcacattt ttaatcatag cactgaggaa gcagaggcag
     4261 atgagccacc ctggactgca gagcaaccca gccttgaatg tagtgagacc agtctcaaaa
     4321 aaaaaggtaa gtgaggctgc aaacatggct tagaggttaa gagtgtggac tgttcttgca
     4381 taggaccatt gagtttagtt cccaacacac atgttgggtg gctcgaaact tcctgtaact
     4441 ccagctccag gggcatccaa catctccagc ctgcacacag atacacataa atatatacac
     4501 ataaacataa ttaccaataa taaaatttaa atgcgttatc aaaggtgatt taatacatgt
     4561 atagaacagg ccaagtgtta cagcatgtga caatagaaaa ggctgtggag tctttgaaga
     4621 aatacataga cgtcattgtt agttttcaat tcaccaagca ttaagtttaa tttaattcag
     4681 tgtcattcat taacccttta tcctgtagtg tcccaatttt tctgtccttc tgaaatgaat
     4741 tgttcaccag cactatcttc tcccgtcttc agctgctcat ttaagatgtg gctgtaaagt
     4801 ggtttttcct aacttacttg ctatcagcat accactgaaa gaaacctctc aggtttcaaa
     4861 gaatttctcc atgaagccag gttagtactc aggaatgtgg tgattgactc taacatggac
     4921 caatatagct tcactcttgt ttctacaccc ccagaatgat agctgacatt gttgttttgt
     4981 ttttcagcag ttgccatgaa ccaaacccta agttaaatat ttatcctact taagactaat
     5041 atcaccacta catgccccat ctgtacaaga taaaacaaaa gcctagggaa ctaactaaca
     5101 taacatagcc agcaaaagac aagattctaa cccataagcc tgatcctaga gcctgtggtg
     5161 accactgtac tttactacca actgactaaa ttccaaccag tcagatgaaa ccatgtatcc
     5221 ttggtcataa gagatactag gtaaaataaa gtgtaatagt atagtgtgga tccattgcaa
     5281 ttactggaat attggtttaa aatactattt ggggtgagat catctttaga cttggatatt
     5341 cttgattctt agtacaaaaa agttattatg tcaataaaac atgcttaaat gtgtaactag
     5401 gaaggtaaag cagtaacaac ttagtgatac aaatacattt ctctgtggac tgccttaagg
     5461 aaagaggagt agattccagg ttgggcagat ggacaggtgc caatagtaag ttcatccaca
     5521 gcctacagta agaaaccatt taaacttctt gcctgtttcc agtcaccatt ctgtgtgtct
     5581 tttgtttttc ttgatttttt ttcaagtgtg ttattcattt tagcccattt ctgccttaac
     5641 tcttactgtt ttttcatagt gttccactaa aatgtacatg gaattgccag tgtataaatt
     5701 aagacgttgt attgtcatca ttcttaatct catttatact tcacaatgtt gagtttccca
     5761 atatgtgatg actattcttg gttgtaatct tgagtactat taggttattg gtaggcagcc
     5821 attgttgaac tacctggacc gtaatttgta agccatctca tacatcccct ttatatgtat
     5881 ttttttttat tctgtaagtt ctgttcttct agaaaatccc aagtaataca gattttcata
     5941 ccagaagtgg ttttcaagca atagaagtat taaggtgatt tttttttaag tatttggaat
     6001 aggttttcca atttgcaaat acctacagtt actgaagtct ctcagaaact cagaatattg
     6061 aaagcccatg ctgtgaactg ttttacaaac taacagggac aaatgcattt gattatcctc
     6121 attatccagc tgtgagaggc aagagacttg gtgagtctgt atataaaact tttgaaaatt
     6181 tgtagaaaaa taaaggaaat gatgatagtg gttggttcct gcttgcatct ctgaataaat
     6241 tgacaaaagg aaaagaatgc actgcttgat aaaattagcc aacttctagc atctcagtgt
     6301 acagtgaaat agttggccag ctccagatac acataacagt caaaaggttt ctaagtgtac
     6361 cctggaagag aatcttccct ccagcaatca cagctcaaat tgtggacaat caaaccaaag
     6421 ccctcattta aggttggcca aatgacaaaa aaaactgaag tcccggcctc agagactgtc
     6481 agtggttaaa gtaagagagc atgaattggt aaagaatggg atctgtaact tggtgtggag
     6541 atgtgtggta ggatcctgtt gaggctcaga actttgaacc ctcaaattcc catgggttta
     6601 cttctcctaa tggaatagtc tctctaccct cagcagatgt actctcaccc ctcaaatatt
     6661 tccttttttg tttttgagga aatacagaat gggtagttaa ggaaggtagt tacaaatacc
     6721 aactatggcc atgtggccag ttaaagaaat gagggttact gtttcttcat attttgttaa
     6781 gaatttgtac aaatatttgt gttttctttc ctcaatttct ttatcatgta atgtaatatc
     6841 aattaagaga atacctgtag ttaccatatt taagttttga gataccaaaa gaatgttcct
     6901 ctagggatat tgccatttat tctagactta atgcatttga ggtagtacaa gatatagttt
     6961 tatcacgtta ggtgcagtta tgatctgatt aaatatataa tgcatttgca attgtacatg
     7021 ggatagttat gcaatgtaag gtcgtgaatt atgacctggt tattattttc atttggaaat
     7081 taagcatggc atcagaagat acgattgtgt gttaagttga caaaggctag atttcagatg
     7141 attcttcttg gttgtcagct tgactacatt cagaattaac tgaagccaaa ctgctgggta
     7201 cacctatgag gatttttttt tcttaattaa atcatttcaa gtgaaaaaaa atactttctt
     7261 ttagcctgga tcttttgaag ttggaagatc cacctttagt cagggccaca ccttctgatg
     7321 gcagccaata taaggacatg gaagaaggaa acttttgcta ttgtttcctt gctcttgcta
     7381 gtaagtccat gccttcagta gagttagagc ctacttcagg atctgggatg ttatgaagag
     7441 caaatgagat gtccatcctg actctagggc tttcctttca tagactgcca ttgttctctc
     7501 tggaccacag cctagaagct actctaatga attccctttc tctacgtatg tgcagattca
     7561 ttctacaaga tctgttgtct agagaacctt aactaatgca ccatacttta agaattctcc
     7621 tttccttgtc ttagggtatt ttttgatcat ttctcatcta tatctggctc ttgtaaatta
     7681 gccttttttt gtcctctcta ctaaaaataa tctctgtatt ttgtttttac ttacttttct
     7741 gtgtccctgt taatctgttt tattacttca tgtatttgaa taacttcata ttttccactt
     7801 tgtatgtcat ctcactgctt ggggaatttt cctcaggtac ctacacaccc tgacatttga
     7861 aaccaaaact caccattctt ctccctaaat ttttattttc ttttcaaata agcatccttg
     7921 cctaattgct ctaccctaaa attgaatcat tgtttctcat ccctactttg acattatcct
     7981 tcattctttt ctgccttcca ttccctgatc tagaaccttg ttgattttgc tcatgttctt
     8041 cttgaagttt gtttttgtgg ttacatagtt tttgttttat atttctacca tacccttata
     8101 gccttccaca tagatctcca tcatgtgagc tcaggttatt atgatttcct tcagttttct
     8161 tttcagaata tccaacttat ataacacttc aaaaatgacc ttcaatctcc atatttatgg
     8221 tatctcattt ttctcagtcc ccagtgatac ttctcactag tgttccataa ccttgttctc
     8281 cattcaagcc tcaactttca ttactctcta acatgtttac cttggtatat cacattcaaa
     8341 cctcctacag ctctctagtg ttatcttaca agccttttgc ctctgtgcct tcctctcatg
     8401 ctatgttgtt gttgttgttg ctgttgttgt tgttgttgtt gttgtttttg tttttcttag
     8461 ataactcttt ggctatacct tctgttatca ctcttcaaaa tttgctcctt cacgtctttt
     8521 gagacagcgt ctcctgattg agtttgcctc acaccagcat cttcccttat tctgttctgc
     8581 ctgagcacat aactttcaag tttgtactgt gatccatgta ctcattacta ccttgctctg
     8641 cagttttcta gccgtctgta tagtagtatc acatctgtat taatccaaga ttaaactgta
     8701 agctccttga gggcagggat gataactgta acatttctat cactgcactc ttcttagtgc
     8761 ctagtacagt gctgagcaca cagtaggtgt ttaataaatg cttgttaaat t
//
