LOCUS       NM_001009656            1930 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus zinc finger CCCH-type and G-patch domain
            containing (Zgpat), mRNA.
ACCESSION   NM_001009656 XM_215974
VERSION     NM_001009656.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Li,R., Zhang,H., Yu,W., Chen,Y., Gui,B., Liang,J., Wang,Y., Sun,L.,
            Yang,X., Zhang,Y., Shi,L., Li,Y. and Shang,Y.
  TITLE     ZIP: a novel transcription repressor, represses EGFR oncogene and
            suppresses breast carcinogenesis
  JOURNAL   EMBO J 28 (18), 2763-2776 (2009)
   PUBMED   19644445
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087720.1.
            
            [WARNING] On May 10, 2024 this sequence was replaced by
            NM_001009656.2.
            
            On Jan 13, 2005 this sequence version replaced XM_215974.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087720.1, SRR8487227.305398.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q43"
     gene            1..1930
                     /gene="Zgpat"
                     /gene_synonym="RGD1310801"
                     /note="zinc finger CCCH-type and G-patch domain
                     containing"
                     /db_xref="GeneID:296478"
                     /db_xref="RGD:1310801"
     exon            1..704
                     /gene="Zgpat"
                     /gene_synonym="RGD1310801"
                     /inference="alignment:Splign:2.1.0"
     CDS             136..1659
                     /gene="Zgpat"
                     /gene_synonym="RGD1310801"
                     /note="zinc finger, CCCH-type with G patch domain"
                     /codon_start=1
                     /product="zinc finger CCCH-type with G patch
                     domain-containing protein"
                     /protein_id="NP_001009656.1"
                     /db_xref="GeneID:296478"
                     /db_xref="RGD:1310801"
                     /translation="MDEDNLETALQTYRAQLQQVELALGAGLDASEQADLRQLQGDLK
                     ELIELTEASLLSVRKSKLLSTVDQEHQEDAEYLAFQKAIAEEAPVDPGNDSKTVPGSE
                     VQPTPTSSALEEEEEDPDLEDLSGAKVNAPYYSAWGTLEYHNAMVVGAEEAEDGSACV
                     RVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQLVSVDELRPFQDPDLSLLQTGSA
                     CLAKHQDGLWHPARITDVDNGYYTVKFDSLLLKEAVVEGDSILPPLRTEATDSSDSDT
                     GDASDSSYARVVEANTVDTGTCSSAFAGWEVHTRGIGSKLLVKMGYEFGKGLGRHAEG
                     RVEPIHAVVLPRGKSLDQCAEILQKKTKQGQTGASRPPRCRRRSSRPEGRPPPRNVFD
                     FLNEKLQSQVPGTPDAGVDTPERRNKDMYHASKSAKQALSLQLFQTEEKIERTQRDIR
                     GIQEALTRNTGRHGMATAHLQEKLEGAQRQLGQLRAQEADLQRKQRKADTHRKMTEF"
     exon            705..838
                     /gene="Zgpat"
                     /gene_synonym="RGD1310801"
                     /inference="alignment:Splign:2.1.0"
     exon            839..994
                     /gene="Zgpat"
                     /gene_synonym="RGD1310801"
                     /inference="alignment:Splign:2.1.0"
     exon            995..1114
                     /gene="Zgpat"
                     /gene_synonym="RGD1310801"
                     /inference="alignment:Splign:2.1.0"
     exon            1115..1520
                     /gene="Zgpat"
                     /gene_synonym="RGD1310801"
                     /inference="alignment:Splign:2.1.0"
     exon            1521..1911
                     /gene="Zgpat"
                     /gene_synonym="RGD1310801"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccctcggcag agcctgggtc ctcctcagcc tttctagcgg tttggggggg gcggcgttgc
       61 acttagccct tcttactgct cttccttcag agcttgtctg ccttaaaggt tccgaaacca
      121 gccttctggg tcaggatgga cgaggacaac ctagagactg ccctgcagac ctaccgggcc
      181 cagcttcagc aagtagagct ggcgctcggt gctggcctag acgcttctga gcaggcggac
      241 ctgcgccagc tgcagggcga tctaaaagaa ttgatcgagc tcaccgaggc cagcctgttg
      301 tcggtcagga agagcaagct gctatctaca gtggaccagg agcaccaaga agatgctgag
      361 tacttggctt tccagaaggc tatagcggag gaagcacccg ttgaccccgg caatgactcg
      421 aagacggtcc ctgggagcga ggtgcagccg acacccacct cctctgcact ggaggaagag
      481 gaagaggacc cagatctgga ggatctgagc ggtgctaaag tgaatgcccc ctactacagc
      541 gcgtggggca cgctagagta tcacaacgcc atggttgttg gcgccgaaga ggcggaggat
      601 ggttctgcgt gcgttcgggt actctaccta taccctaccc acaagtccct gaagccctgc
      661 ccgttcttcc tggagggaaa gtgccggttc aaggagaact gcaggttttc ccatggccag
      721 ttggtatctg tggatgagct gcgtcccttc caggatccag acttaagctt actacagact
      781 ggctctgcat gtctggccaa gcaccaggat ggcctttggc acccagcacg gatcactgat
      841 gtggacaatg gctactatac tgttaagttt gactcgttgc tgctgaaaga ggctgtggtg
      901 gagggggaca gcatcctgcc tcctctacgc actgaggcta cagattcatc tgactcagac
      961 actggtgatg caagtgactc cagctatgcc agagtggtgg aagcaaacac agtggacact
     1021 gggacctgca gttctgcctt tgctggctgg gaggtacaca cacggggcat tggctccaaa
     1081 ctcctcgtca agatgggcta tgagtttggc aagggtttgg gccggcatgc agaaggccgg
     1141 gtggagccca tccatgctgt agtgttgcct agagggaaat cactggacca gtgcgcagag
     1201 atactgcaga agaagacaaa gcaaggccag actggtgcca gcaggcctcc aagatgtcgg
     1261 aggaggagta gtagacctga gggccgccca ccccctcgga atgtgtttga ctttttgaat
     1321 gaaaaactgc aaagccaggt tcctgggacc ccagatgctg gagtggatac cccagagaga
     1381 aggaacaaag acatgtatca tgccagcaag agtgccaagc aggctttgag cctgcagctc
     1441 ttccagactg aggagaagat agagcggacc cagcgggaca tccggggcat ccaggaggcc
     1501 ctaacccgca acactggccg gcatggtatg gcgacagccc atctgcagga gaagctggag
     1561 ggagcccagc ggcagctggg tcagctgcgt gctcaggagg ccgacctaca gaggaaacag
     1621 cggaaggcag acactcacag gaagatgacg gagttctagt ggccctgcct gggactcagc
     1681 tcccaactgc cttggcagaa agacagctgt cgccctgacg cctcaacagc actgagaaga
     1741 ggagccagcc ccttcctagg acatccctta tttagccttt tcagcctaaa gtgtgaacac
     1801 tgctgagtag agatgggaca tcagggctga ttttgaactt atctgcccac caagcccacc
     1861 taccagtgtt ttggggtatc tccttaggac attaaagtga tttcatcata aaaaaaaaaa
     1921 aaaaaaaaaa
//
