LOCUS       XM_006242677            1297 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger, GATA-like protein 1
            (Zglp1), mRNA.
ACCESSION   XM_006242677
VERSION     XM_006242677.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006242677.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006242677.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1297
                     /gene="Zglp1"
                     /note="zinc finger, GATA-like protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 22 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100360291"
                     /db_xref="RGD:2322460"
     CDS             106..1086
                     /gene="Zglp1"
                     /codon_start=1
                     /product="GATA-type zinc finger protein 1"
                     /protein_id="XP_006242739.1"
                     /db_xref="GeneID:100360291"
                     /db_xref="RGD:2322460"
                     /translation="MAKSAPRCKQRPHVTCAARLRPGGAHRHHPRLSLILGFIPGGGG
                     LRGAGQRDSTAGPTVGMEAAQARDLTRPQELLAPPCLDTESLRKSRPPALEPGALRCL
                     TPNGRSLWPACQDSVSTALPFLQEKEKGLPGSPSPATQVLGSCWELMVIGMSDHLSMA
                     RNPKSTQCPNLETSSATSPASLQRRPRKQLNPRMGIEKVDPRFKGVTLEFQIQPDSSL
                     QIVPTYSLPGRSCSQKLPTSPSKALASPGSTEALGPRRCASCRTQRTPLWRDAEDGTP
                     LCNACGIRYKKYGTRCSSCWLVPRKSIQPRRLCGRCGVSQDPHLGPTQEL"
ORIGIN      
        1 tttgaccttc aaggctatgc tgtgtgatag aagatagcta gcaaagaggg atatccagag
       61 agggcttcct gatcatgagc cacacagctg aggttcctgg cagccatggc aaaaagtgct
      121 cccagatgca aacagcgccc ccacgtgacc tgcgccgccc ggctccgccc aggtggcgcc
      181 catcgtcatc accctcgcct ctctctcatc ctcgggttta tccctggggg aggggggctg
      241 agaggggcgg ggcagagaga ttccacagct gggcccacag tgggcatgga ggcggcacaa
      301 gctcgagacc tgacgcgccc gcaggaactt ctggcgccac cttgtctgga caccgagtca
      361 ctccggaaga gtcgaccccc cgcgctggag cctggagccc tgagatgcct cactcccaat
      421 ggcaggtctc tgtggcctgc atgccaggac tcggtcagca cggcactgcc tttcctccaa
      481 gagaaagaaa aggggctgcc gggttcccct tcgccagcca cccaggtctt ggggtcgtgc
      541 tgggagctga tggtcatagg gatgtcagac cacctaagta tggccaggaa tcccaagagc
      601 acgcagtgcc ctaacctgga aacttccagt gctacttctc ctgcctcact ccagagaaga
      661 ccacggaagc agctgaaccc tcgaatgggc attgagaagg tggaccccag gttcaagggg
      721 gtaactctgg agttccagat ccagccggat tctagcctcc agattgtacc cacctacagc
      781 ttgcctggca gaagttgttc acagaagctc cccacaagcc cttccaaggc ccttgccagc
      841 ccagggagca ccgaggccct tgggcccaga cggtgtgctt cttgtaggac ccagaggact
      901 ccactctgga gagatgctga agatgggacc cccctctgca atgcctgtgg catcaggtac
      961 aagaaatatg gcacccgttg ttccagttgc tggctggtcc caaggaaaag catccagccc
     1021 agaaggctgt gtggcaggtg tggggtgtcc caggaccccc acctaggccc aactcaggaa
     1081 ctgtaagccc ttctttatct ggccaagtca gtttgtctca gtttctctag ggggaacaac
     1141 gggtagagag agcactttgg aagttggcag ggatcccagt gggagagtca ggcctcaggc
     1201 ccagagtccc acctgtgggg tcacccacct gctggctccc ccttctccac ttagtcctgg
     1261 atgaacccca aataaaagga aatcgtttca gaaatga
//
