LOCUS       NM_001399738             800 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus zinc finger FYVE-type containing 21 (Zfyve21),
            transcript variant 1, mRNA.
ACCESSION   NM_001399738 XM_006240642
VERSION     NM_001399738.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Jan 13, 2022 this sequence version replaced XM_006240642.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CO562334.1, FN806446.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-196               JAXUCZ010000006.1  136695151-136695346
            197-247             JAXUCZ010000006.1  136706659-136706709
            248-416             JAXUCZ010000006.1  136707211-136707379
            417-492             JAXUCZ010000006.1  136708474-136708549
            493-584             JAXUCZ010000006.1  136708628-136708719
            585-727             JAXUCZ010000006.1  136710895-136711037
            728-800             JAXUCZ010000006.1  136711168-136711240
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..800
                     /gene="Zfyve21"
                     /note="zinc finger FYVE-type containing 21"
                     /db_xref="GeneID:362789"
                     /db_xref="RGD:1311036"
     exon            1..196
                     /gene="Zfyve21"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..763
                     /gene="Zfyve21"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger FYVE domain-containing protein 21; zinc finger,
                     FYVE domain containing 21"
                     /codon_start=1
                     /product="zinc finger FYVE domain-containing protein 21
                     isoform 1"
                     /protein_id="NP_001386667.1"
                     /db_xref="GeneID:362789"
                     /db_xref="RGD:1311036"
                     /translation="MSSGVAARCDAKKLVRSPSGLRMVPEHRAFGSPFGLEEPQWVPD
                     KECPRCMQCDAKFDFITRKHHCRRCGKCFCDRCCSQKVPLRRMCFVDPVRQCADCALV
                     SHREAEFYDKQLKVLVSGATFLVTFGDSEKPETMVCRLSNNQRCLILDGDSHHEIEIA
                     HVCTVQILTEGFTPGAGSTRATGMFLQYTVPGAEAAAQLRLMAGEDASGSKRQAAAWL
                     AAMHKATKLLYESRDQ"
     exon            197..247
                     /gene="Zfyve21"
                     /inference="alignment:Splign:2.1.0"
     exon            248..416
                     /gene="Zfyve21"
                     /inference="alignment:Splign:2.1.0"
     exon            417..492
                     /gene="Zfyve21"
                     /inference="alignment:Splign:2.1.0"
     exon            493..584
                     /gene="Zfyve21"
                     /inference="alignment:Splign:2.1.0"
     exon            585..727
                     /gene="Zfyve21"
                     /inference="alignment:Splign:2.1.0"
     exon            728..800
                     /gene="Zfyve21"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggtggcgac ctgtgtgggc tcagcgcggg cggtggcgtg aggggctcag gaggagacat
       61 gtcctcgggg gtggccgcgc gttgcgacgc caagaagctt gtgcgctcgc ccagtggcct
      121 gcgcatggtg ccggagcacc gcgccttcgg aagccctttc ggcttggagg aaccgcagtg
      181 ggttccggac aaggagtgtc caagatgtat gcagtgtgat gccaagtttg actttatcac
      241 cagaaagcat cactgccgcc gctgtgggaa atgcttctgc gacaggtgtt gcagccagaa
      301 ggtgccactt cggcgcatgt gcttcgtgga cccagtgcgt cagtgcgctg actgtgccct
      361 ggtgtcccat cgagaggctg agttctatga caagcagctt aaggtgcttg taagcggagc
      421 taccttcctt gttacttttg gggactcaga gaagcctgag accatggttt gtcgtctttc
      481 caacaaccag agatgcttga ttctggatgg agacagccat catgaaattg agattgcaca
      541 tgtgtgtact gtccagattc tcacagaagg cttcactcct ggagcaggca gcactcgagc
      601 cacaggcatg ttcctgcagt acacagtgcc aggggcagag gctgcagcac agctgaggct
      661 gatggctgga gaagacgcaa gcggcagcaa gaggcaggcg gcagcatggc tggcagccat
      721 gcacaaggct accaagctcc tctatgaatc acgagaccag taagtacacg ggaactgagc
      781 tcgggcacat cgggttacag
//
