LOCUS       XM_039080438            3194 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger RNA binding protein 2
            (Zfr2), transcript variant X7, mRNA.
ACCESSION   XM_039080438
VERSION     XM_039080438.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080438.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3194
                     /gene="Zfr2"
                     /note="zinc finger RNA binding protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 7 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:314639"
                     /db_xref="RGD:1304737"
     CDS             16..2544
                     /gene="Zfr2"
                     /codon_start=1
                     /product="zinc finger RNA-binding protein 2 isoform X7"
                     /protein_id="XP_038936366.1"
                     /db_xref="GeneID:314639"
                     /db_xref="RGD:1304737"
                     /translation="MAASSSSGLAQGASPSSDTQPSSTLSLPATGASYTVPSTPRMKS
                     TVSLALAPTSQPPAPRGGVTVGYSCSQPHPSQGPTSNSRSRGPVPTTASTHQEDGHSC
                     REKATKSRTDSRERPARSLSRPGPSSRSPDSDSVSPDSWGGPVLGPWDPTFTSDALPF
                     LDRLPKPKAGPRPPSMHYCEVCRVSCAGPQTYRDHLEGQKHRKKQAAQRTRTQPSGGP
                     RGSQSLHCGLCAVSCTGADAYAAHMRGARHQKVFKLHTRLGKPIPSEPTPRSVTYTRG
                     SDSTPETSVKHEAHARHSSHTQGRPAPAKGPAASRKGSPELQTVHSWPGDRRPSHCKA
                     EATRGGSGEASGISGDTEPVGTEYVEQVCSEEGKVIRFRCKLCECSFNDRNARDMHLT
                     GRRHRLQYRKKVDPTLPVATRPSGPMQRVLAKRLQRQRQQTQARLEDAQRWNSELRQQ
                     EEHSRQPEEPPQPQVEEQLPGSPTWALPAPTTRPGMASPRRQSGRRPESSDDRHVMYK
                     HASIYPTEEELQAIQTAVSHTERALRLVSDTLAEESSQQGTLVSPPPRMLKGVVRVGI
                     LAKGLVLRGDHSVQLTLLCSKKPTHSLLQRIKQELPRELSIVAEDKYEVSSDHDANIV
                     ISACVEPGVKVTVSATSPLMREDPSVKQELQDSLSDPEDILDRERCLETLAALRHAKW
                     FQARASGLQPCVIVIRVLRDLCRCLPPWGALPAWAMELLVEKVLSSAPRPLSPGDAMR
                     RVLEYVATGALLTDGPGLQDPCEKGPQDALEPMTPQQREDLTASAQHALRLVAFRQIH
                     KVLHMEHLPPRTRFGARKRMREASQTQEGARERKRGRQGTAGLP"
ORIGIN      
        1 cgggaggacg cggacatggc ggctagcagc tcttccggcc tcgcgcaggg cgccagcccg
       61 tcctcagaca cccagccctc ctccactctc tccctcccag ccactggggc cagctacact
      121 gtgccgtcta cccccaggat gaagagcact gtcagcctgg ccctggcacc taccagccag
      181 ccgcctgcac ctagaggagg agtcacagtg gggtacagct gctcccagcc ccaccccagc
      241 cagggcccca catccaacag ccggtcccgg ggtcctgtgc ctaccacagc atccacccac
      301 caggaggatg gtcacagctg ccgagagaag gcgaccaaga gccgcacaga ctcacgggag
      361 cggccagcca ggtcgctctc ccggccagga ccaagctccc gcagccccga ctcggactcg
      421 gtgtcgccgg actcgtgggg tggcccggtc ctaggaccct gggaccccac ctttaccagc
      481 gacgcgctgc cgttcctgga caggctgccg aagcccaagg cgggccccag gccgccctcc
      541 atgcactact gcgaagtttg cagggtcagc tgcgcggggc cgcagaccta tcgggaccac
      601 ctggaagggc agaagcaccg gaagaagcag gcagctcaga ggacccgcac gcagcccagt
      661 ggaggtccta gaggatccca gagccttcac tgtggcctgt gtgctgtgtc ctgcacgggg
      721 gcggacgcct acgctgccca catgagggga gccaggcacc agaaggtctt caagttgcac
      781 accaggctag ggaagcccat tccctctgag cccacaccac ggagtgtcac ctacacccga
      841 ggttcggaca gcacccctga gacctcagtc aagcatgaag ctcatgcccg tcacagctca
      901 cacacccaag gccggccagc accagccaag ggaccagcag cctcacgcaa ggggtcacct
      961 gagctacaga cagtgcacag ctggcctgga gacaggcggc catcacactg caaggcagag
     1021 gccaccaggg gaggctccgg ggaagcttcg gggatctcgg gagacacgga gccagtaggc
     1081 acagagtacg tcgagcaggt gtgcagcgag gaggggaagg tgatccgctt ccgatgcaag
     1141 ctctgcgaat gcagcttcaa tgataggaat gccagagaca tgcacctgac gggacgccgg
     1201 caccggctgc agtacaggaa gaaagttgac cctacacttc cagtggccac ccggcccagt
     1261 ggccccatgc agagggtgct ggccaagcgg ctgcagaggc agcggcagca gacacaggca
     1321 cggctggagg atgcacagcg ctggaactct gagctgaggc agcaagaaga acacagcagg
     1381 cagccagagg agcctccaca gccccaggtg gaggagcagc tgcccgggtc acccacctgg
     1441 gcattgccag ctcccactac cagaccaggg atggccagcc cccggcgcca gtcagggcgg
     1501 cggccagaga gcagcgatga ccgtcatgtc atgtataaac acgcttccat ctaccccacg
     1561 gaggaggagc tccaggctat ccagacagcc gtgtcccaca cagagcgagc cctcagactg
     1621 gtgtcggaca cgctggccga ggagagcagc cagcaaggta ccctggtgtc cccaccaccg
     1681 aggatgctca agggagtggt gcgggttggc attctggcca agggcctggt ccttcgcggg
     1741 gaccacagtg tacagctgac cttgctgtgc tccaagaagc ctacgcactc cctgctgcag
     1801 aggatcaagc aggagctgcc ccgagagctg tctatagtgg cagaggacaa gtacgaggtc
     1861 tcatctgacc atgacgccaa cattgttatc tcggcctgtg tggagcctgg ggtgaaggtc
     1921 accgtgtctg ccacctcacc tctgatgcgg gaagaccctt ccgtaaaaca agaactgcaa
     1981 gactctctgt ctgacccaga ggacatcctg gaccgggaga ggtgcctcga gaccctggca
     2041 gccctccgcc atgcaaagtg gttccaggct cgagccagcg gcctgcagcc atgtgtgatt
     2101 gttatccgag ttctgaggga tctgtgccgc tgcctgcccc cctggggggc cctgccggcc
     2161 tgggccatgg agctgctggt ggagaaggtt ctgagcagtg caccccggcc cctgagccca
     2221 ggggatgcca tgcgtcgggt gctggagtac gtggccacgg gcgcgctcct gacagatggc
     2281 ccagggctac aggacccttg tgagaaagga ccacaggatg ccctggagcc catgacccca
     2341 cagcagcgag aagacctgac agccagtgca cagcatgccc tgcgtcttgt ggccttccgg
     2401 cagatacaca aggtcctgca catggaacac ttacctccac ggaccagatt cggggcccgg
     2461 aagaggatga gggaggctag tcagacccag gagggggcca gggagaggaa gaggggccgg
     2521 cagggcacag cagggctgcc ttgaaccagc tatcaccaac ctacacatcc catacctgaa
     2581 caggtgtggt ccctccagct gctggctcct gaagtgggac gcctttgtca ttgtgtctgt
     2641 agatttattc atgatgctgt gggggtcccc ctgaggtgac cccatgccca tggctgtcac
     2701 ctacccaccc ccaagccaga tagcagtgac ctccttggta ctagttgcta tgtgaagctc
     2761 ccttgatgtc ctaagaagtc aatgggatct ggatcgcttc cttgagatgc caggaagggt
     2821 ggcctggaat attctgtggg tcacagaatg agtgtagagg agcagagggt gcagaatggg
     2881 attccccacc acatccttca cacagacccc cttactgcac accagctgtg aggacactgt
     2941 cacccccaca gtgcaaccct agtcccagtc actgagtgcc ttccgtagat gacccactcc
     3001 accccgtgtc accctgtgga ccactgggcg tggacacagg cgaggacaaa gcactatcct
     3061 ttaggcctcc tttgcctcct ctggaccccc tggtgtaatc cctaggcttc aaccctgttc
     3121 cattctgcct gtggctttct aaggccagcc agcccacaaa agcctgggtg gggaataaag
     3181 tagatctgcc catg
//
