LOCUS       NM_001107472            1975 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 954 (Zfp954), mRNA.
ACCESSION   NM_001107472 XM_001057581 XM_218215
VERSION     NM_001107472.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1975)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1975)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474102.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_218215.4, XM_001057581.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CO573270.1, DY312709.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..1975
                     /gene="Zfp954"
                     /gene_synonym="Zfp772"
                     /note="zinc finger protein 954"
                     /db_xref="GeneID:308320"
                     /db_xref="RGD:1561308"
     exon            1..239
                     /gene="Zfp954"
                     /gene_synonym="Zfp772"
                     /inference="alignment:Splign:2.1.0"
     CDS             162..1409
                     /gene="Zfp954"
                     /gene_synonym="Zfp772"
                     /note="zinc finger protein 772"
                     /codon_start=1
                     /product="zinc finger protein 419"
                     /protein_id="NP_001100942.1"
                     /db_xref="GeneID:308320"
                     /db_xref="RGD:1561308"
                     /translation="MATSQGPTILWSPMVIVEAAGGALPQVSQYSVKPANQEEGCVSF
                     EDVAVYFSWEEWTLLDDSQRLLYQTVMTEIFTLVSSLRLELSGIQDLTQAESCGDLSV
                     PALRFLTPCLWTGCWIKVESESPIEQSLSAEGGVSLSTLQQQMLCCAETPLLSTDNVT
                     ILQTSSSLLRHQVTSSGRDAPTNTESGEAIQNEKKNCKCTYCGKIFTSISHLNRHWKI
                     HTGEKPFQCSECGKSFSQKAFLIKHFRMHTGEKPYRCGECGKAFKHNISLISHQGLHT
                     GEMPFKCTECGKSYRSREGLKVHYRFHTGEMPFECSECGKSYRSREGLLNHFYSHTAE
                     KPFSCGECGMYFTQNSELIEHLTVHGKPFKCNECGRVFNSSYNFVRHMKVHVVAKQYA
                     CRECDKVYCSSSSLYKHRKIHAR"
     exon            240..278
                     /gene="Zfp954"
                     /gene_synonym="Zfp772"
                     /inference="alignment:Splign:2.1.0"
     exon            279..405
                     /gene="Zfp954"
                     /gene_synonym="Zfp772"
                     /inference="alignment:Splign:2.1.0"
     exon            406..504
                     /gene="Zfp954"
                     /gene_synonym="Zfp772"
                     /inference="alignment:Splign:2.1.0"
     exon            505..1975
                     /gene="Zfp954"
                     /gene_synonym="Zfp772"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtaacttcc tggacccgtc agtatggttc acagaaaact ggtgtcatcg gctttagcca
       61 tggctggaaa gccggcgcgt tagaagcgtt tgtcctccgt ctcaaagacg gatctgaggt
      121 ctgcgacaac ccgtgtgatc tgatccagcc ttagagtggg gatggccacg tcccagggcc
      181 ccaccatcct ctggagccca atggtgattg tggaagctgc gggtggagcc ctgccccagg
      241 tttcccagta ctcagtgaaa cctgccaacc aggaagaggg ctgcgtgtcc tttgaggatg
      301 tggctgtgta cttctcctgg gaggaatgga cactgcttga tgactctcaa aggctcctgt
      361 accagacggt gatgacagaa atcttcacac tagtgtcctc cctgagactt gaactttctg
      421 ggattcagga tttgactcag gcggagtctt gtggagatct ctctgtgccg gcactgaggt
      481 tcttgactcc atgtttatgg acaggttgtt ggatcaaagt ggagagcgag tcccctattg
      541 agcagagtct gtctgcagaa ggaggtgtta gtttatccac actgcaacag caaatgctgt
      601 gctgtgctga gacacccttg ctaagcacgg acaatgtgac gatccttcag acctcctcca
      661 gtcttctcag gcatcaggtg acttccagtg gtagggacgc cccaacgaac actgagagcg
      721 gagaggccat tcagaacgag aagaagaact gcaaatgcac ttactgtggc aagatcttta
      781 ccagtatatc ccacctcaat cggcactgga agatacacac aggagaaaag cctttccagt
      841 gcagcgagtg cgggaagtcc ttcagccaaa aggcctttct cattaagcat ttcagaatgc
      901 acaccggaga gaagccttac aggtgcggcg agtgtggcaa agccttcaag cataatatct
      961 cccttatttc tcatcaggga ctccacacag gagaaatgcc ttttaagtgc actgaatgtg
     1021 ggaaatcata caggagcaga gaaggcctta aggtccatta tcggtttcac actggtgaaa
     1081 tgccctttga gtgtagtgaa tgtggcaagt cgtacaggag cagagagggc cttctgaatc
     1141 atttctacag tcatactgca gagaagcctt tcagctgcgg tgaatgtggc atgtatttca
     1201 cccaaaactc cgagctcatt gaacatctaa cggttcacgg caagcctttc aagtgcaatg
     1261 agtgtgggcg agtctttaat tccagttaca actttgttag acacatgaaa gtgcatgttg
     1321 tagcaaagca gtatgcatgc agggagtgtg acaaagtgta ctgcagcagc tctagcctgt
     1381 acaaacaccg gaagattcat gcgagataga ccactcagga gagctctaag ggtacgacgt
     1441 cctttggcca tctccgtgaa cacttgaaat ctctgcgaga aaaaagaagt gttaaacgct
     1501 tcaaagcaaa ggagggcatc atctacccac acctccagcc cagaaaagtg aagttgtcac
     1561 cggacttagg ctgcagtgtg aacccttgga ttctgggata ggctctgagc agagcaaaag
     1621 tgttttctga acaacaggca caccccacat tggtctctgg gtgtggagat tgtagggagt
     1681 agcttcagcc actggcaaac cttcagccct aggactgaac ctgaccttag agaagttccg
     1741 agaatggctt ttgtgagaca cagtcattgg aacttcttcc tggagtaggt acatcaggac
     1801 atgaggacta ttgtcatctt tctgttccca aggagctgat gccagggagc taagtgagat
     1861 ggcagagttt ctgattttgg atggcgtagg aacagagtgg tttaataatg agacatgact
     1921 gctctttttg ctgagtgttg cagtgccctg aaataaatgt gtttttcttc tctgt
//
