LOCUS       XM_039093492            2906 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 94 like 1
            (Zfp94l1), mRNA.
ACCESSION   XM_039093492
VERSION     XM_039093492.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-121               JACYVU010000033.1  3773435-3773555     c
            122-334             JACYVU010000033.1  3771710-3771922     c
            335-415             JACYVU010000033.1  3767658-3767738     c
            416-417             "NN"               1-2
            418-458             JACYVU010000033.1  3767617-3767657     c
            459-554             JACYVU010000033.1  3766175-3766270     c
            555-2906            JACYVU010000033.1  3762829-3765180     c
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2906
                     /gene="Zfp94l1"
                     /note="zinc finger protein 94 like 1; The sequence of the
                     model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     inserted 2 bases in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 88
                     Proteins, and 98% coverage of the annotated genomic
                     feature by RNAseq alignments, including 49 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102548695"
                     /db_xref="RGD:7529325"
     CDS             200..2248
                     /gene="Zfp94l1"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: zinc finger protein 45"
                     /protein_id="XP_038949420.1"
                     /db_xref="GeneID:102548695"
                     /db_xref="RGD:7529325"
                     /translation="MAKAVQSWGQPTHATEQTLEGSLLPVMSSQDEAVPQEDRRMTSS
                     KETVTLKDMTVVFSEEELGLLDAAQRKLXDVMLESLRNVASLGHRIGTPDGLLRLKRE
                     DMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRD
                     CRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTST
                     GEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGE
                     NAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPY
                     KCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQC
                     EECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEE
                     CGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCD
                     KVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKG
                     FCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFS
                     WSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK
                     "
ORIGIN      
        1 tgcccgtcac cacgctggga ctggcactcc gtctctggcc tctttatacc tgaggacacg
       61 cacacagtgg aagagctgct gtcaacatca cgcaactggc cagacaagag cttcttccca
      121 gggcccttag tagacggagt gagctgtgac tataactcag tacactctcg ccatcaagcc
      181 acaccaagga gtggacacca tggctaaagc tgtgcagtca tggggacagc cgacgcacgc
      241 cactgagcag actctcgagg gcagtcttct ccccgtcatg tcttcccaag acgaagctgt
      301 tccccaggaa gacagaagga tgaccagcag caaggagacg gtgacgttga aggacatgac
      361 tgtggtcttc agcgaggaag aactggggct gctggatgct gcccagagga agctgnntga
      421 cgtgatgctg gagagcctga ggaatgtggc atccctgggg catcggatcg ggactccaga
      481 tggtttgctc aggctcaaga gagaagacat gttttggctg ttgacagtgg ctcgctggag
      541 cagtgggtct atgggagaca agaatctaga ggacatggag tttctcgagg aggtgggact
      601 gaggcacctg ccacatgagg agcttttctg ctcacagatc tggcagcgaa ttacaaggga
      661 gttaaccaag gttcgagact gcagagtacg tgtcggagaa aatggctctc cgatgaaacg
      721 agacaatcgt gaagacgagt acagcaaaca ttccagtcaa aattcagtct ttcaggttca
      781 ccacagggaa tgccatgaag aagaggcaaa tgagagagat tttggttgca gccaccatct
      841 tcgtaccagt acaggagaaa agtcctacaa gtgtgaaaaa tgtcacaacg cctcccattg
      901 gttctcaagc cttcagtccc atcagggagt gtgtgataga cccagatgga acaagtctgt
      961 gtcacagttt aaaattttcc gtcagtggcc actgtttcat tatcaacaga gcatgcccaa
     1021 tggagaaaac gcacaggaat atgaggcgtg tgggaatgcc gggaaaaact cctctggtca
     1081 gacagctctg ttcgtccaca ccgcagagga accctattca tgtgaggagt gcggggcacg
     1141 cttcagtcag agctcatacc ttcaagtcca ccagagagtt cacaccggag agaaaccgta
     1201 taagtgcgag gagtgtggga agggcttcgg ctggttatca caacttcatg ctcatcatca
     1261 aagccacact ggagagaaac cctatacgtg tgacgcgtgt ggcaagggct ttagttacag
     1321 ctcacacctt aacattcact gtagaatcca cacgggtgaa aagccctatc agtgtgaaga
     1381 gtgtgggaaa ggcttcagcc aggcctccaa cctcctggcc catcagcgcg gccacactgg
     1441 cgagaagcca taccagtgcg atgcttgtgg gaagggcttc agtcgtatct ctgattttaa
     1501 cattcacatt agagtccaca cgggtgagaa gccttataag tgtgaggagt gtgggaaagg
     1561 cttcagccag gcctcaaatc ttctggccca tcagagaggc cacactggag agaaacccta
     1621 caaatgcaac acgtgtggga agtccttccg taggagttca gaccttaacg ttcattgtag
     1681 aatccacaca ggagagaaac cctatagatg tgagaaatgt gacaaagtct tcagccagtt
     1741 ctcaagtctc caagtgcatc agagggtcca cacaggagag aaaccatatc agtgctcaga
     1801 gtgtgggaag ggcttcagtg taggttctca acttcaagcc caccagaggt gccacactgg
     1861 agagagaccc tatcaatgtg aggagtgtgg gaagggcttc tgtcgggcct ccaactttct
     1921 agctcatcat ggggtccaca caggagagaa accataccga tgtgacatgt gtgggaaaca
     1981 cttccggcag aggtcctacc tccaggccca ccatagggtc cacacgggag agaaacagtt
     2041 ccgatgtgag gagtgcggga agggcttcag ttggagctca tacctccaag cccaccagag
     2101 agtccacatg ggagagaaac catacaagtg tgaggagtgt gggaagggct tcagctggag
     2161 ctcaagtctc ctgacacacc agcgagtgca tgccgaggac gaggggcaga aggacctttc
     2221 ttcatcaggg ggttcgtaca ggaaataggc tctacaaact taggttttga catttcaaga
     2281 gggcgccgaa atatctaatc tgagctgttg cggggcatgg aaaagttaac atagctgggc
     2341 ttgtgtgtta gagctgtact gggctgctac atggtttggg gcaccagagt gaactgggaa
     2401 gaatggatct gtgatcattt catccagaaa cccgaccctt atcagactga tgcaaataag
     2461 gtgtccagga agttgaacct ggcctggaac caattcagag catggtctac tctgtggaat
     2521 ttaacccccc ctcagaagga agaaggaaga catcatctgc agctcaattt gcctgccttc
     2581 ccagtgcccg acacatcata cacctttggc cattgttaag tatcaagaaa ggcagtcacg
     2641 gcagctcacg gttgttcttg cagccctcag gaggctgagg aaggttttct gtaggatcag
     2701 cctagattaa gcaggggagc ccatctcagc acaccaatag ggacagggag cagaggagga
     2761 gcaatcattt ggaaggtggt ttgttgtaaa aatataaaaa aaaaaaaagt atggcggtct
     2821 tttacctcac taggtccaac accgcggtgc cccaagatat ctgctagata tcttgccaga
     2881 agcacacatt cttattccat ggcggc
//
