LOCUS       XM_039100242            5720 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 948 (Zfp948),
            transcript variant X1, mRNA.
ACCESSION   XM_039100242
VERSION     XM_039100242.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100242.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5720
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5720
                     /gene="Zfp948"
                     /note="zinc finger protein 948; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 81 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:102550851"
                     /db_xref="RGD:7563768"
     CDS             2669..4594
                     /gene="Zfp948"
                     /codon_start=1
                     /product="zinc finger protein 54-like"
                     /protein_id="XP_038956170.1"
                     /db_xref="GeneID:102550851"
                     /db_xref="RGD:7563768"
                     /translation="MADSSVNMSKRLLTFRDVAVDFSQEEWECLDSAQRTLYIEVMVE
                     NYTNLVSVENYSIRGTVHRPLRTEKVSCQSNKRGEIFHGSSNCVLYKRSDTTETSNNY
                     RCCKDRDASVDSSEPGQHTSTHTGEEPCEPKDCEKSSSLCSNIAQDQRTNTANKEQRQ
                     EKRDDHFSSTHSLIQQIIYIREKRHQCAQCKKSFRTSANLTIHQRIHTGEKPYKCNFC
                     DKAFAQCTTLKTHQRLHTGEKPYKCKECGKSFPQLSGLKSHQKMHTGEKPYKCKDCDR
                     FFAHCSSFRRHQKTHSAKNKQHYTDPNCGKDLHQLSHFKSHHSLHTAEKPYRCSDCDR
                     SFTHYELFRVHQKTHSSEIDYECKKCGQSFTELSELKRHYIIHAGTKDYKCRECDKSF
                     TQYSTLQRHLAIHIGERHYKCKECDKAFLHNSHLRRHQSVHTGEKPYRCKECDKSFTR
                     SSILKQHQKIHTKEQPYKCVECDKSFSQPTHLRTHLRVHTKEKPYRCTVCDKSFTTSA
                     TLRIHHRVHTGERPYKCTECNKSFREGTTLRAHKKIHTGEKPYKCKECDKSFIRYAHL
                     QRHQRVHTGEKPYKCMECGKSFTECFLLRKHQRIHTGEKPYKCQNCDISFLCISNLRQ
                     HQKTHTEEKHPVVNNVI"
ORIGIN      
        1 tgtaactttg gctgatctag aactcactct gtaggccagg ctggccttga actcacagac
       61 acctgcctgc ctttgcctcc tgagtgcttg gattaaaggc atgcaccacc actgccaggt
      121 catgaggtcc tgacagttac cgaaggtaaa gtcacaactt acttggtaga aatgtgttga
      181 caaatggatc ttctgtctac tgacattaaa gacttctgtt gtaccaaata ggatactcaa
      241 attgaaatgg atgagtttcc aggtgcatgt aacatatgaa gtataaacaa catgaaataa
      301 ataatataaa taagactaag aggaagaatg ggactgaagc aattataaaa tgccatcctt
      361 aaaacaacct catgactaga atgacaggat tctatcagaa ctttaaagaa ctaacagcaa
      421 atcaacttaa catttaatac ttcttgcccg aaaaaaatca agacttcctg actattacct
      481 gatactaagg cagataatga acctgacatg tggagcatgc ctttaatcct agcaattcca
      541 caggcaggga aggcagacct cagtgagttc aaggccatct tggcccccaa aactataaaa
      601 caagcaagca agcaaacaaa tcaacaaaca aaaaacccac cacatactgg tacaaccaaa
      661 aagaaattac actctgatgt taaaattaaa caactggtct ggtcacatta gcacaggtct
      721 ttaaacacag gttcatacag agaaacgctg tctacaatga aggaatgaat aacccgtccc
      781 ccaaattttc tgttagatat ttcacagaca cagacacgtc acatcattgt gtgtttctgt
      841 gccaatttca aacactaccc accctcatct cctccctccc ctgtcctggt ccacaattcc
      901 aacaattacc ctatgattgt tcatccctat tcgtcttgcc tggacccact gagatgaact
      961 agagtcattt gtgagactgg gtttggagct atgtgctgga gcctgagtgc tcagcacagg
     1021 ataacaacta taggcagtga ttcttctaca atctatccat agccaacatc tgagagataa
     1081 agtgagccat tccctttcct agactgactg tggttttctg tgaggccagt gcagccaagg
     1141 acagttgctg ttggttactc attacagtag ttgtatggag tctagagaat ggcctgtctt
     1201 acttcctcct ctttccctta cttcctaacc acctcttgtc tctcagtgtt cccagagctg
     1261 gaggtggtat ggagtaacag acattttcag gactagaacc atgtgcttta cttatctttt
     1321 gcatcttgcc aagcgtctgc atccaccaga catctgtttc ccttcatatc aaatttagct
     1381 tgagtcacgg agcagtaaaa tgagttggta aaatgacaag accgccatct agtggtaaaa
     1441 gcagtacatc gcggaatgaa ttctgcccta agctgttagc aaaacgaaca cttttttaga
     1501 cacttttttc cccctcaaaa tccaagttct ttgaatatct gtaccaaagt caaaatttca
     1561 gactttggtt ttggcttcgc atatttgtgt gttggggatg ggactctggc ttctcaagtt
     1621 agcctgttat tgttttgtat gaagtaggct tgttttaggc tattttgcat gcgaaggatt
     1681 cagaaaccag gatggggagt cagataccgg gtgcagagtc ctatcaaacc cagttctggt
     1741 ctaggctggc agtcgtcatg gggaggctgt gcagatcggg tccagggcag cctgacagct
     1801 cgagctgtgt gacaggaagc ctgagacaga gtgggaggga ccggtcttcg ccgagcagga
     1861 atacacaccc agaaacatgg tggaaggttg ttagccctta ggtgggggtt gaaaaaaaat
     1921 agttccgagt gggaggaatt agaggagtga cgtaaacgga agctggaaac tgggtgtggg
     1981 aggctggaga cctgagacag agaaccaaag acagaagtat catcagcccg ttcaagtcca
     2041 gagctccagg ccctgcaccg cggggaatcg cgaggtacag acctggagtc ggaggacata
     2101 ggacttcgtg ggaaggtaaa actcccagca gccgcggaaa gtcagcaatc agtaatcggc
     2161 agcgaagcgg cgggaactgg agccaggcca gggctcactg atcacccaga ccttcgtacc
     2221 tgtggagacc tggaaggtgg agagggagga gacagtagct aaggattcag gctgcaggct
     2281 agctattcat tgttcctgaa agggaaattc aaagaagaga aacagaaaga aatggctaat
     2341 tctccaataa acatgtccca gaaatagggt attactatgg aaccttggct gatcagaaat
     2401 tcagtattcc aggctggcct tcaactcaca gagatctgct tgactctgcc tgccgagtgt
     2461 agggattaaa gctggtccac tgaggtcaac cagagccatt tgtgaggctg agggtttgga
     2521 gttatgtgct ggagcctgag tgctcagcag aggatgacaa ctaaagcagt gattcttcca
     2581 caatatatcc atagccaacg tctgagaggg tcactagcca actattcatt cttcttcaaa
     2641 gaggaaaatc aaagagaaac ggaaagaaat ggctgattct tcagtcaaca tgtccaagcg
     2701 tctgttgaca ttccgagatg tggctgtgga cttctcccag gaggagtggg aatgcctgga
     2761 ctctgctcag aggactttgt atattgaagt gatggtcgag aattatacca acctggtgtc
     2821 tgtggagaat tattctatac gtggtactgt ccatcgacct ctgaggactg aaaaggtgtc
     2881 ttgtcagtct aataagcgtg gtgaaatatt tcatggttcc tccaactgtg tactttataa
     2941 aagaagtgac actacagaaa cctctaataa ctacagatgc tgtaaggaca gggatgcctc
     3001 tgttgactca tcagagccag gtcaacatac aagcacgcac actggagaag aaccttgtga
     3061 acctaaagac tgtgagaaat cttctagttt gtgttccaac attgctcaag atcagcgaac
     3121 aaacactgca aacaaggaac agagacaaga aaaacgtgat gaccatttca gttctacaca
     3181 cagtctcata caacaaataa tctacattag agagaaacga caccagtgtg cgcagtgcaa
     3241 gaagtccttc cgtacctccg caaacctcac tatacatcag agaattcata ctggagagaa
     3301 accctacaag tgcaactttt gtgacaaagc ctttgcccag tgtacaactc ttaaaacgca
     3361 ccaacgcctt catactggag agaagcctta caaatgcaaa gaatgtggca aatcatttcc
     3421 tcagttgtca ggacttaaaa gccatcagaa aatgcatact ggagagaagc cttacaaatg
     3481 taaggactgt gacagattct ttgcccactg ttccagtttc aggagacatc agaaaaccca
     3541 tagtgctaag aataagcaac attatactga cccaaattgt ggtaaagact tgcatcagct
     3601 ttcacacttt aaaagccatc acagccttca tactgcagag aagccttaca gatgcagtga
     3661 ctgtgataga tcctttaccc actatgaatt atttagagtt catcagaaaa ctcattcttc
     3721 agaaatagat tatgaatgca aaaaatgtgg tcagtccttt actgaattat cagaacttaa
     3781 aaggcattac ataatccatg ctggtacaaa agattacaaa tgtagagaat gtgataagtc
     3841 ctttacccag tactcaactc ttcaacgcca tctggcaatt catattggag aaagacatta
     3901 caaatgtaag gaatgtgaca aagcctttct tcataactca catcttagaa gacatcagag
     3961 tgttcatact ggagagaagc cttatagatg taaggaatgt gacaaatctt ttactagaag
     4021 ctcaattctt aaacaacatc agaaaattca tactaaagag cagccttaca aatgtgtgga
     4081 atgcgacaaa tccttttcac agcccacaca tctaagaaca catctgagag ttcatactaa
     4141 agaaaaacct tataggtgta ctgtatgtga caaatccttt actacgagtg caactcttag
     4201 aatacatcat agagttcata ctggagaaag accatacaaa tgtacggagt gcaacaaatc
     4261 ttttcgtgaa ggcacaactc ttagagcaca taagaaaatt catactgggg agaaacctta
     4321 caaatgtaag gaatgtgaca aatcctttat caggtatgca catcttcaaa gacatcagag
     4381 agttcataca ggagagaaac cttacaaatg tatggaatgt ggcaaatctt ttactgagtg
     4441 ctttcttctt agaaagcatc agagaattca tactggagag aaaccttaca aatgccaaaa
     4501 ctgtgacata tcatttttgt gtatttcaaa tcttagacaa catcagaaaa ctcatactga
     4561 agaaaaacat cctgttgtaa ataatgtgat ataacattta tctggtgttc tctgcttaca
     4621 gatcacaagg agataagtag tagacccaca aagataacaa gcttgtgaaa tcctttaata
     4681 aagattgaaa tctttagaag tataacaaag tttatattaa aataaaattc tgtacatgtc
     4741 actgcaggga aaaccttttt tccctatttc tatatgtatg agtgcctggc ctgcaagtat
     4801 gtgtgtgcgc tatgcatacg cctggtgcag atagaagcta taaaagagca tcagatcctc
     4861 tgacattggc agaaaagaca gttgtgcata gctatctgta tgttggaatt gaactccaat
     4921 tctcaatagc aaccagtgct cttaatcact gacccttctt tctcatactg gggaaaagct
     4981 ataacaaaaa catttatctg actaacatcc aagtattcat aataatgaga caaaatggtt
     5041 catgccttta atcccagtgc tcagaaccca gagacaagaa gattactgtg agttttgggc
     5101 catctttgtc tacatagtga gtttcaagac tgccatggct acatagatcc tgtctcaaca
     5161 acaacaacaa aaaccataat aaaaacaacc aaagagcata acatgtagta acagaacaat
     5221 atgacatcca attgtgctgt acatcacaga attaatccct atgagaaacc atgtgaaggt
     5281 gtaccatgca ttttcctcat gctttgctgt tcattgcaca ttagacacat atccaacaaa
     5341 tatattgaat tcgataaatc ctttaaaaac tagtgctgaa attgcaaaga taagaggcaa
     5401 ttcatcatga aaaaagtggt gtgataaata cctttcattc accttcagaa tcttcatact
     5461 agagtctatc cttacaaata ccaagaagga tacaaagagt aaaaattagg ctgtgcatgt
     5521 gatgtcactg gtgtgttcac atatatctta gaaatcctca aaggctaagg atgtggtgat
     5581 acttgccttt catgccatag ctctggacac agaggtaggt acagcttgtg agtttgaggc
     5641 cagtcttgtc gacagtacaa attccaaatc agccagggtt acacagaaat cctcagtctc
     5701 aaaaaaaaaa aaaaagaatt
//
