LOCUS       XM_006228931            5195 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 939 (Zfp939),
            transcript variant X1, mRNA.
ACCESSION   XM_006228931
VERSION     XM_006228931.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006228931.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006228931.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5195
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5195
                     /gene="Zfp939"
                     /note="zinc finger protein 939; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 19 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:690136"
                     /db_xref="RGD:1584032"
     CDS             135..1805
                     /gene="Zfp939"
                     /codon_start=1
                     /product="zinc finger protein OZF-like isoform X1"
                     /protein_id="XP_006228993.1"
                     /db_xref="GeneID:690136"
                     /db_xref="RGD:1584032"
                     /translation="MGSVSFEDIAVDFTWDEWQHLDVAQRRLYRDVMLENYSSLLFLG
                     RCMTKPEVIFKLEHGFGPWPVVDSSVRSLPGIHKMPAQNANDQENHKGHLWQVEIANT
                     QTPNDKSVKADLKVSRKLQPGTASQEDKGCVRALIQQPQHTRGRRSHTRKKSGRHKSP
                     LSHCQRPLNEETLCTHRQHRKSQVTGQRSHEGEKPYENSGCGKASHTKSQHQSTPRDE
                     KPYKCLECGKYFYYKSQIIEHQRSHTGEKPYECTECGKSFSYKSHLTVHHRSHTGEKR
                     HECTECRKDFYYKSQLTQHQKSHTGEKRYECTQCPEAFYFKKQLTHHQKTHSPEKHFK
                     CKQCGKAFNWRSNLAVHQKIHSGEKPFECKQCGKAFYCKSHLTVHQRTHVNKKLYPCS
                     QCRKAFYSQAQLALHQRIHTDEKPYECKQCGKTFYSKSGLTAHQKTHTGEKPYACKEC
                     GKAFYNKYLLIEHHRVHTGEKPYQCTECRKAFFSKKHLSLHQKTHASEKSFYCAECGK
                     AFSWMSHLTQHQRIHTGEKPYACEQCRKTYYFKRQLTRHQRTHTHEES"
ORIGIN      
        1 caagctaacc tctgtcaggt gcttcttctc cctctccgtc tctgggattc tctgcctcgt
       61 cctgtcgcca gtgtctggct gctccctgct gagggaagct ccataattag ggcactggtg
      121 ttcaggaacc ggaaatgggt tccgtgtcat ttgaagacat tgctgtggac ttcacctggg
      181 atgaatggca gcatctggat gtggcacaga ggagactcta cagggacgtg atgctggaga
      241 actacagcag cctcctgttc ttgggacggt gcatgaccaa acctgaggtg atcttcaagt
      301 tggagcatgg atttgggcca tggcctgtgg tagactcctc tgtccgcagc cttccaggta
      361 ttcataaaat gcctgcccag aatgcaaatg accaggaaaa ccacaaagga catttgtggc
      421 aagttgaaat tgccaacacc cagacgccga atgacaaaag tgttaaagca gacctgaagg
      481 tgtcccggaa actccaaccc gggacagcat cccaggaaga taaaggatgt gtgagggcat
      541 tgatccagca gcctcagcac acgaggggtc ggaggagtca cacacgtaag aaaagcggtc
      601 gtcataagtc acctctcagt cactgtcaga ggcctcttaa tgaggagacg ctgtgtacac
      661 acagacagca caggaagtca caggtgacgg gacagagaag tcacgaaggg gagaagccat
      721 atgaaaactc aggatgtggg aaagcctccc acaccaagtc tcagcatcag agcactccca
      781 gagacgagaa gccctacaaa tgtctcgaat gtgggaaata tttctactac aagtcacaaa
      841 tcattgagca ccaaagaagt cacacaggtg agaagcctta tgagtgtaca gaatgtggaa
      901 agtctttcag ctataaatca cacctcactg tccatcacag aagtcatacg ggtgagaagc
      961 gtcatgaatg tacagaatgt agaaaagatt tttactataa gtcccaactc acacagcacc
     1021 aaaaaagcca tacgggggag aagcgctatg aatgtacgca gtgccctgaa gctttctact
     1081 ttaagaaaca acttacccat catcagaaaa ctcatagtcc tgaaaagcac tttaaatgta
     1141 aacagtgtgg taaagctttc aactggaggt ccaacctggc tgtgcatcag aaaatccaca
     1201 gtggggagaa gccctttgaa tgtaaacaat gtggtaaagc cttttactgc aagtcccacc
     1261 tcaccgtgca tcagagaact catgtaaata aaaagcttta tccgtgctca cagtgcagga
     1321 aggcattcta ctctcaggca cagcttgctc tacatcagag aattcacact gatgagaagc
     1381 cctatgagtg taaacagtgt ggcaaaacat tctacagcaa gtctgggctc actgcacatc
     1441 agaaaacgca tacgggcgag aagccctacg catgtaaaga gtgtgggaag gcgttctata
     1501 acaagtacct gctcattgag catcatagag tccatacggg cgagaagccc tatcaatgta
     1561 cagaatgcag gaaagcattt ttctccaaga aacatctttc tctccatcag aaaactcacg
     1621 caagtgagaa gtcattttat tgtgcagagt gtgggaaagc tttctcctgg atgtcacacc
     1681 tcactcagca tcagagaatt catacgggtg agaagcctta tgcatgtgaa cagtgtagga
     1741 agacttacta ctttaagaga caactcactc gacatcaaag aactcataca cacgaggagt
     1801 catgaggtat aaataacact ggcgaatgcc acctctctgt atgaaagaaa taagagagaa
     1861 gccctgtggt gagtgttgca gatacagaca tttttgtccc tcatgcatcc cttactccaa
     1921 gtcagatgag aaagcctaag agagtaaaga atgtatgaac tcctgctgaa gtgtatcatc
     1981 aggaatgatt aatgtaaaac ctgtggacat tttctagtgt aagtcaggtc actcaaccaa
     2041 tgagcctata ctggggtcta tctgcaaaca ctgttggaag gcatgttcct catactgtgt
     2101 gtaagagagt tcatgcatgg ggctgtctcc tatggagtta aaaactatac catagctttc
     2161 tcattcttcc cattacttca gtgtattgta ggtggggtaa cacagaacat aaaggacaga
     2221 ggaaggtgtt cgaacattaa accccatcag ttcacacctg aaagctttta caggtgcagg
     2281 cccagtgaca ttaatgaaaa tagacacatt ttgagataga aattggacat ttaggaactt
     2341 gttatgtgat atgtcacata gagcaaaaag caaagcgaga tgtattattt catgctttca
     2401 attctaggtc ctgatactgc aggtttacta ggactcagcg attgaagatt gaacttagca
     2461 tcataggcag gttccgtttg atataaagta gaaaagcctt gttgaagtgc ccatgtcaag
     2521 ttatgacatt gcagcccctg tgttaaaaac ccatataaat tcccagatat gaagagtata
     2581 aggagtacca atacttttga aatgaactta aaatttaacc tagaatcatt aaaccaatac
     2641 acaggattaa acataagatt ccagtatgaa gacattcttg aacttagcaa cataggcagg
     2701 ttccatttga tataaagcag aaaagacttc ttgacgttct cccctgtcag acgatgacat
     2761 tgtgacccat gtctttaaaa ccctcagaat ctaaagagtg ccaaaacttg aaatttatct
     2821 ggcatcagaa acccaacaca gaagattcca gtaacattct tgaaatgaaa acattcttgc
     2881 ctccgtagtc caggtggctc tttttacaag gattcaccaa ctatttatag tataaagact
     2941 ccagaaacag cactcagcca tgcttcccac agtaccagcc ctcagagagc tcatgaacat
     3001 gagagcacat ttgaagctca cacattaact tgtcttaaac gtggctcagt ggccgtgtgc
     3061 tcatcagtct tgtgctgtgt gtctgcccac agaacttttc acgtgtcatc ttgatttagg
     3121 atatttttgt tcatgttcat ttgtaaatca gttcaaactg tacacaagat tgaatgcctc
     3181 ctcaggcatg agaattttaa atatgtttac atttttatac ttgttaacct ttgagacaag
     3241 cacttgatgt gtagcctatg tgtcctcagg cttctgcatc ctcattggta tatatctata
     3301 cacacacaca cacacataca cacatgtaca gaacattcac acccaataga agtacaagac
     3361 attctttata cattaagaca ttgtacatca taacatcagc atatgtgatt ttcatcttaa
     3421 ttttcaagta gaattgtatt taaatgtgct attggagatt aaaatgttaa actgtaccca
     3481 aataaacata gtgatattcc ttaccaatat atacttggca attttttttc agatttttat
     3541 tctttataat gcattggatg gaacccacag actcatgcgt gctaggcaaa tgctctacca
     3601 tagcatttta ggcaaggttt tgatgaattt tttgtcatta ccagagcttc atagttgaaa
     3661 ttaattgact aaaggccaca catactatta agttgatgtg ctttatagat agtagacttc
     3721 atttacttga gtgtcttcat cataaccaca aagaatatgt gaagtttgcc taaaaatata
     3781 gcagttgaag gttagagtac acctcgcaac atggcatctg cctttgcgag tgtactttat
     3841 aattgtaatc cccaacaccc acaaataata tagaaaaact tggtcagaaa gcataattca
     3901 aagagaaggt accagcttta ttcagagcca tgcccttaac catctgagct gcaccatcag
     3961 aagtctaaaa tatttctcca aatagtgcca caatttcaag atcaaacact tagtacataa
     4021 atgtggtaga aattccatgt gcacatagtg attgtgtttc caaataggtt aatcaattat
     4081 ttaaggaagc gtgggagact attaataagg caaatgcaat taaaactgat aaacaagata
     4141 tccaaagcct ttaggaataa ggagcacatt ttaatcagaa taaaatatgc acagtaaata
     4201 acatcataaa catgagaggg ctccccttct cataggagaa gggggagagt gaggctgata
     4261 tgatgtaaag taaatgaata aattaattta aaagtgaaat gctaatggga ttcttatatt
     4321 tagtgtgcgt gtgtgtgtgt gtgtgcgtgc gtgcatgctc caccatgtac atgtatagat
     4381 tggagggcag cttccttagc acctgcaaat gtaacccttt aggaataagc gtttttgcag
     4441 atgtaattaa gctaaggact aggatatgaa taatgctatc atgggttctt catatgagcc
     4501 ctaaaatcaa actttactat cctaattagg aaacaaagga gaagatgtgt gtggtgacac
     4561 acatttgtgc ccttagctac tctgttgggt aaggcagtag gttcacaatt tgaaagccag
     4621 tgtgggctat agagtaagta caaggccaac atgaatgaga tactatttct ctctcccttt
     4681 ccctctcacc gcccccacac atgtaaaaga atatatgaaa agctagaaaa agttgaatcc
     4741 tgtaatataa gcaatcagag atagggacag gaagaagaat gtaaggtcgt cccccagctg
     4801 tatagttagt tccatgccaa caaaatctat ctacataaga tgaaaaacaa ggctttcttc
     4861 ataggtagcc attcccaact aaagtatggc ataaaaacat gaacacttgg cagtagtgtt
     4921 ctaataggtc tctaggaact ggtgggtata taactaagat gctgactccc ttcccacaga
     4981 atacgtgttc tatccagtca accttacatg gacagtagac aacactgcta gagccaacaa
     5041 ctccgcctca aagttggcct ttcctggtac ctggtttcca gacctgtgga cctctgtgat
     5101 cacacaggaa ggctggaacc cctcacccta gcaaccaatg tttcaatttg cctaaggcaa
     5161 ggcaccaacc aggacaaagg agttgagata aaccg
//
