LOCUS       NM_001025765            2212 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 90 (Zfp90), mRNA.
ACCESSION   NM_001025765 XM_574234
VERSION     NM_001025765.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Hata,L., Murakami,M., Kuwahara,K., Nakagawa,Y., Kinoshita,H.,
            Usami,S., Yasuno,S., Fujiwara,M., Kuwabara,Y., Minami,T.,
            Yamada,Y., Yamada,C., Nakao,K., Ueshima,K., Nishikimi,T. and
            Nakao,K.
  TITLE     Zinc-finger protein 90 negatively regulates neuron-restrictive
            silencer factor-mediated transcriptional repression of fetal
            cardiac genes
  JOURNAL   J Mol Cell Cardiol 50 (6), 972-981 (2011)
   PUBMED   21284946
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Lange,R., Christoph,A., Thiesen,H.J., Vopper,G., Johnson,K.R.,
            Lemaire,L., Plomann,M., Cremer,H., Barthels,D. and Heinlein,U.A.
  TITLE     Developmentally regulated mouse gene NK10 encodes a zinc finger
            repressor protein with differential DNA-binding domains
  JOURNAL   DNA Cell Biol 14 (11), 971-981 (1995)
   PUBMED   7576184
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001025765.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097467.1, SRR26360176.2109470.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-104               JAXUCZ010000019.1  51231894-51231997
            105-171             JAXUCZ010000019.1  51232215-51232281
            172-298             JAXUCZ010000019.1  51235608-51235734
            299-394             JAXUCZ010000019.1  51236052-51236147
            395-2212            JAXUCZ010000019.1  51241222-51243039
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..2212
                     /gene="Zfp90"
                     /note="zinc finger protein 90"
                     /db_xref="GeneID:498945"
                     /db_xref="RGD:1563077"
     exon            1..104
                     /gene="Zfp90"
                     /inference="alignment:Splign:2.1.0"
     exon            105..171
                     /gene="Zfp90"
                     /inference="alignment:Splign:2.1.0"
     CDS             139..2040
                     /gene="Zfp90"
                     /note="zfp-90; zinc finger protein 90 homolog"
                     /codon_start=1
                     /product="zinc finger protein 90"
                     /protein_id="NP_001020936.1"
                     /db_xref="GeneID:498945"
                     /db_xref="RGD:1563077"
                     /translation="MAPRPPTATPQESVTFKDVAVNFTQEEWRHVGPAQRSLYRDVML
                     ENYSHLVSLGYQVSKPEVIFKLEQGEEPWISERELQRPFCPDWKTRPDIKSWSSQQGV
                     SEVSHSANVWSHATFGDIWGVNTQRHQESWRRHLGPEASSQKKITALEKIAEQNKFGE
                     DSGLSTDLVPQLDVSSSIRPSECKTFGNNLEYNSELVTQSGIPAKKKPYKCDKCRKSF
                     IHRSSLNKHEKIHKDDAYSNGTDQGVPSGRKHHECTDCGKTFLWRTQLTEHQRIHTGE
                     KPFECNVCGKAFRHSSSLGQHENAHTGEKPYQCSLCGKAFQRSSSLVQHQRIHTGEKP
                     YRCNLCGRSFRHSTSLTQHEVTHSGEKPFQCKECGKAFSRCSSLVQHERTHTGEKPFE
                     CSICGRAFGQSPSLYKHMRIHKRSKPYQSNNFSIAFEPNIPLTQGESVLTDVKSYHCI
                     DCGKDFSHITDFTEHQRIHAGENSYDSEQALRQQSLSHPREKPYQCNVCGKAFKRSTS
                     FIEHHRIHTGEKPYECNECGEAFSRLSSLTQHERTHTGEKPYECIDCGKAFSQSSSLI
                     QHERTHTGEKPYECNECGRAFRKKTNLHDHQRIHTGEKPYACKECGKNFSRSSALTKH
                     HRIHSRNKL"
     exon            172..298
                     /gene="Zfp90"
                     /inference="alignment:Splign:2.1.0"
     exon            299..394
                     /gene="Zfp90"
                     /inference="alignment:Splign:2.1.0"
     exon            395..2212
                     /gene="Zfp90"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcagagctg caccgccgag aacaagaaac tgcagcgggc gctagaggga cggacctgag
       61 gtcgcggatt ccgaagcccc ggagccagat ttcgagtgcc gtggccctgg accatagcca
      121 gcactcactg aggcaggaat ggccccgaga cctccgacgg ccacgcccca ggagtcagtg
      181 acattcaaag atgtggctgt gaacttcacc caggaagaat ggcgccatgt gggccccgcc
      241 cagaggagct tatataggga cgtcatgctg gagaactata gccacctggt ttcgctcggg
      301 tatcaagtct ccaagccaga ggtgatcttc aaactggagc aaggagaaga gccatggata
      361 tcagagagag aactccaaag gcctttctgt ccagactgga agaccaggcc tgacatcaaa
      421 tcgtggagtt cccagcaggg cgtatctgaa gtatcccaca gtgcaaatgt ttggtcgcac
      481 gccacattcg gagatatctg gggtgtcaat acccagaggc accaggagag ttggagaaga
      541 catcttgggc cagaggcatc ttcccagaag aaaataaccg ctctggagaa aatagctgag
      601 caaaataagt ttggtgagga ctcaggtttg agcacagact tggttccaca attggacgtt
      661 tcttcaagca taaggcccag cgaatgtaag acatttggaa ataatttgga atacaattct
      721 gaattagtta ctcagagtgg tatccctgct aaaaagaagc cttacaagtg tgataaatgt
      781 aggaagtcat ttattcatag atcatcactc aataaacatg agaaaattca taaagacgat
      841 gcttattcca atggtacgga tcaaggagtt ccttctggaa ggaaacatca tgagtgcact
      901 gactgtggga aaactttcct gtggagaaca cagcttactg agcatcagag aattcacact
      961 ggggagaaac ccttcgagtg taatgtgtgt ggaaaggcct tcaggcacag ctcatccctt
     1021 ggtcagcatg aaaatgcaca tacaggggag aaaccctatc agtgtagtct ctgtggaaaa
     1081 gccttccagc gcagttcatc tcttgttcag caccagagaa tccatactgg agaaaaaccc
     1141 tatcggtgta acctctgtgg gaggtcattc aggcacagta cgtcccttac tcaacatgag
     1201 gtcacacata gcggagagaa acccttccaa tgtaaggaat gtgggaaagc ctttagtaga
     1261 tgttcttccc ttgttcaaca tgagaggact catacaggag agaagccttt tgaatgtagc
     1321 atatgtggga gggcgtttgg tcagagccca tccctttata agcatatgag gattcataag
     1381 agaagcaaac cttaccaaag taacaacttc agcatagctt ttgagcctaa cattcctctc
     1441 actcaaggtg aaagtgtgct cactgacgta aagtcatacc attgtattga ctgtgggaaa
     1501 gacttcagtc acatcacaga cttcactgag catcagagga tccatgctgg agagaattcc
     1561 tatgactctg aacaggccct tcgtcagcag tccctgtctc atccccgaga gaaaccctat
     1621 caatgcaacg tatgcgggaa agcttttaaa aggagtacga gttttataga gcatcataga
     1681 attcatactg gagaaaaacc ctatgaatgt aatgagtgtg gagaagcctt cagtcgactc
     1741 tcgtcactga cgcaacatga gagaacccac actggagaga aaccatatga atgtattgac
     1801 tgcgggaaag ccttcagtca aagttcatcc cttattcagc atgaaagaac tcatactgga
     1861 gagaaaccgt atgaatgtaa tgaatgtggc cgtgccttta gaaagaaaac caatctgcat
     1921 gatcatcaga gaattcatac tggagaaaag ccctatgctt gtaaggaatg tgggaaaaac
     1981 ttcagcagga gctcagccct tactaaacac cacagaattc attcacgaaa taaactgtag
     2041 gagagcaaaa aaacgacagg atgggtagga aacactgtct aaaatctggt tccaacccag
     2101 tttctgagaa agtctgagaa tgtaattatg tgtttataca ctgtgtatgg agaaaacggt
     2161 gccactagac ggactttttt ttttttaata aaagccattc tttcatacct ga
//
