LOCUS       NM_001421390            2451 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 873 (Zfp873), transcript
            variant 1, mRNA.
ACCESSION   NM_001421390 XM_006241025
VERSION     NM_001421390.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On May 18, 2023 this sequence version replaced XM_006241025.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.37727.1,
                                           SRR26643293.38060.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               JAXUCZ010000007.1  8602456-8602577     c
            123-249             JAXUCZ010000007.1  8580679-8580805     c
            250-310             JAXUCZ010000007.1  8580411-8580471     c
            311-2451            JAXUCZ010000007.1  8577731-8579871     c
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..2451
                     /gene="Zfp873"
                     /note="zinc finger protein 873"
                     /db_xref="GeneID:100912294"
                     /db_xref="RGD:6487604"
     exon            1..122
                     /gene="Zfp873"
                     /inference="alignment:Splign:2.1.0"
     CDS             120..2183
                     /gene="Zfp873"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger protein 431-like; zinc finger-like protein-like;
                     zinc finger protein 709-like"
                     /codon_start=1
                     /product="zinc finger protein 709-like isoform 1"
                     /protein_id="NP_001408319.1"
                     /db_xref="GeneID:100912294"
                     /db_xref="RGD:6487604"
                     /translation="MAAVTYEDVHVNFTHEEWALLDPSQKSLYKDVMLETCRNLTAIG
                     YGLEDHNIEEHYQNSGRHWRYNIRHCGYKPCENKGHGKKQCTFACNNFLQTYERVYTE
                     EKPYKCNQYSKAFLNFHSLPQHAKNHPREKPYECGKAFVSPSCLQIHQRTHMGQKTYN
                     CRECSSPQIHKRIHTGEKHYECSKSGKAFENADYLQNHDKHHTLEKLFECSQCGKAFA
                     SRSYLPIHQRVHTGEKPYECTQCGKAFTSRSYLKIHKSIHTGEKPYECNQCSKAFANF
                     YSLRQHEKYHTREKPYECSHCSKAFPSPSSLQVHERTHTGEKPYECNECGKAFISHSS
                     LQIHRRVHTGEKPYECTLCGKAFVNRSYLEVHKRIHSGEKPYECNQCSKAFANFRSLR
                     QHEKNHTREKPYECSQCSKAFVSPCHLQIHQRTHTGEKPYDCSECGKAFTRLSNLQVH
                     KRTHTGQKPYCCSECGKAFPCLSNLQIHERTHTGEKPYECNQCGKAFASRASLQYHEK
                     HHTGDKPYGCNQCGKAFVSPSHLQIHQRTHTGEKPYECNQCGKAFARRSNLQIHKRTH
                     TGEKPYECNQCGKAFASRASLQYHEKHHTGEKPYGCNQCGKGFALRSLLQVHERTHTG
                     EKPHECTQCGKAFVSRSYLQIHKRAHAGEKLYECIQCGKAFVYLTSLCSHRKFCAGEK
                     SYGST"
     exon            123..249
                     /gene="Zfp873"
                     /inference="alignment:Splign:2.1.0"
     exon            250..310
                     /gene="Zfp873"
                     /inference="alignment:Splign:2.1.0"
     exon            311..2451
                     /gene="Zfp873"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcctaggat gctgcaggtt tggctgtgag tctgagggag gctctcgtgg ttccgcgcgc
       61 agctctttca acggctgctg ggagctgtga ggagagcggg cgagctcgga atccgcgcaa
      121 tggctgcagt gacctatgag gatgtgcatg tgaacttcac tcatgaagag tgggctttgc
      181 tggatccttc ccagaagagt ctctacaaag atgtgatgct agaaacatgc aggaacctca
      241 ctgctatagg gtatggattg gaagaccata atattgaaga acactatcaa aattctggaa
      301 gacattggag gtataacatc cgtcattgtg gatacaagcc ctgtgagaat aagggccatg
      361 gaaagaagca atgtaccttt gcatgtaaca attttcttca aacatatgaa agagtctata
      421 cagaagagaa accctataag tgtaatcaat acagtaaagc ctttttaaat tttcatagtc
      481 ttccacaaca tgcaaaaaat catcctagag aaaaaccata tgaatgtggt aaagcttttg
      541 taagtcccag ttgtcttcaa atacatcaga gaacacatat gggccagaaa acctacaatt
      601 gcagagaatg tagttctcct caaatacaca aaagaattca tactggagag aaacattatg
      661 aatgttccaa gagtggtaaa gcctttgaaa atgctgatta tcttcaaaat catgataaac
      721 atcatactct tgagaaactc tttgagtgta gtcaatgtgg aaaagccttt gctagtcgaa
      781 gttatcttcc aatacaccaa cgagttcata ctggagagaa accatatgaa tgtactcaat
      841 gtggtaaagc ctttacaagt cgcagttatc tcaaaataca taaaagcatt catactggag
      901 agaaaccgta tgaatgtaat caatgtagca aagcctttgc aaatttctat agtcttcgac
      961 aacatgaaaa atatcatact agagaaaaac cttatgaatg tagtcattgt agtaaagcct
     1021 ttccaagtcc cagttctctt caagtacatg aacgaactca cactggtgag aaaccctatg
     1081 aatgcaatga atgtggtaaa gcatttataa gtcacagttc tcttcagata cacagaagag
     1141 tccatactgg agagaaacca tatgaatgta ctctatgtgg aaaagccttt gtaaatagaa
     1201 gttatcttga agtacacaaa agaattcaca gtggagaaaa accatatgaa tgtaatcagt
     1261 gcagtaaagc ctttgcaaat ttccgtagtc ttcgacaaca tgaaaagaat catactagag
     1321 aaaaacccta tgagtgtagt caatgcagta aagcctttgt aagtccttgt catcttcaaa
     1381 tacaccaaag aactcataca ggagagaaac cctatgattg cagtgaatgt ggtaaagcat
     1441 ttacacgtct cagtaatctt caagtacaca aaagaactca tacaggacag aaaccctatt
     1501 gttgcagtga atgtggtaaa gcatttccat gtctcagtaa tcttcaaata catgaaagaa
     1561 ctcacactgg agagaaaccc tatgaatgta atcagtgtgg taaagccttt gcaagtcgtg
     1621 ctagtcttca gtaccatgag aaacatcata ctggagataa accatatgga tgtaatcagt
     1681 gtggtaaagc ctttgtaagt cccagtcatc ttcaaataca ccaaagaact cacactggtg
     1741 agaaacccta tgaatgtaat cagtgtggta aagcgtttgc acgtcgtagt aatcttcaaa
     1801 tacacaaaag aactcacact ggtgagaaac cctatgaatg taatcagtgt ggtaaagcct
     1861 ttgcaagtcg tgctagtctt cagtaccatg aaaaacatca tactggagag aaaccatatg
     1921 gatgtaatca gtgtggtaaa ggctttgcac ttcgcagtct tcttcaagta catgaaagaa
     1981 ctcatactgg agagaaacca catgaatgta ctcagtgcgg taaagccttt gtaagtcgta
     2041 gttatcttca aatacacaaa agagctcatg caggagaaaa actctatgaa tgtattcaat
     2101 gtggaaaagc ctttgtatat ctcactagtc tttgtagtca cagaaagttt tgtgctggag
     2161 agaaatccta tggcagtact tgatataaag ttggaccact gagtaacaag gcaacagacc
     2221 tgcttctgga cctatgcatt gtaatcttgt agcacattgt ttactctcct tagagttagt
     2281 agttgcatcc ctattagggt tgaatatatg tccatcccag gccatttatg tggccattct
     2341 tctatggttg tagcagagac atctgttcta gagccaatta atcttgtaat ggttttcctc
     2401 ttccatttaa atacatgaat gttttatgat tctccttcaa taaagtgctt a
//
