LOCUS       NM_001163062            2382 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 870 (Zfp870), mRNA.
ACCESSION   NM_001163062 XM_001078207 XM_343177
VERSION     NM_001163062.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On or before Jul 9, 2009 this sequence version replaced
            XM_343177.3, XM_001078207.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22399492.39263.1, AW916964.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               JAXUCZ010000007.1  12654207-12654320   c
            115-241             JAXUCZ010000007.1  12645571-12645697   c
            242-302             JAXUCZ010000007.1  12645321-12645381   c
            303-2382            JAXUCZ010000007.1  12640653-12642732   c
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..2382
                     /gene="Zfp870"
                     /gene_synonym="Zfp709l2"
                     /note="zinc finger protein 870"
                     /db_xref="GeneID:362845"
                     /db_xref="RGD:1597136"
     exon            1..114
                     /gene="Zfp870"
                     /gene_synonym="Zfp709l2"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..1782
                     /gene="Zfp870"
                     /gene_synonym="Zfp709l2"
                     /codon_start=1
                     /product="zinc finger protein 709-like 2"
                     /protein_id="NP_001156534.1"
                     /db_xref="GeneID:362845"
                     /db_xref="RGD:1597136"
                     /translation="MESVSFEDVAVKFTQEEWAVLDPSQKKLYKDVMQETLRNLASIG
                     NKLSKQKVVSEYEKLWRKLSSQLVEKFCDYHESRQCAEIFSFNPGHSCPGLATFVKNA
                     CEEGRIGHSSLGVPLNHQVGPYEDQEYGQALYERKELGSSSSSLSLQMHKSTPTGEKP
                     SNNKNFEEDLPCVKSSQMYEQNGCAKKSYMHKACGKGFAHPSPLQRHEKVHSVKKPYV
                     CELCGKGFARLGNLLRHQRTGTGENPFLPDPYTRSLPRSACLRRRMSIHAGEKPYVCE
                     QCGKTFLDSTYFRIHRRIHTGVKPYVCKQCGKAFTASRYLKSHELTHTREKSYVCEQC
                     GSAFTFWYQFQKHKVTHSGVNPYVCKQCGKGFTYSSSLKTHERTHTGQKPYVCKHCGK
                     TFGSSGNLKRHGSTHTGERLYVCKQCGKSFNNHSSFQFHNRMHTGENPYKCKQCGKDL
                     ASSSSLQNHERNHSGEKPYACLQCGKAFSSDSSLRKHKIMHSEEKPYVCKHCGKSFRR
                     FFEVRVHERIHSSERPYECETCGRGFLSSTHLRRHVPIHSRPNKGISK"
     exon            115..241
                     /gene="Zfp870"
                     /gene_synonym="Zfp709l2"
                     /inference="alignment:Splign:2.1.0"
     exon            242..302
                     /gene="Zfp870"
                     /gene_synonym="Zfp709l2"
                     /inference="alignment:Splign:2.1.0"
     exon            303..2382
                     /gene="Zfp870"
                     /gene_synonym="Zfp709l2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggcatgttt gttacttgga agtacatcct ggatcccagg tctagatatc aaagtcgcct
       61 tctgtgacag caggagcggc aggaagacac caggacactc cgtggctgga aatggagtca
      121 gtgagctttg aggatgtggc tgtcaagttc acgcaggagg agtgggctgt gctggatcca
      181 tcccagaaga agctgtacaa agatgtgatg caggaaaccc tgaggaacct ggcctctata
      241 ggaaacaagt tgagcaaaca gaaggttgtg agtgagtatg agaaactatg gagaaaactg
      301 agcagccaac tggtggagaa gttctgtgac tatcatgaaa gtcgtcagtg tgcagaaatc
      361 ttcagcttca atccagggca ctcctgtcca ggacttgcta cctttgtaaa gaatgcctgt
      421 gaagagggta gaattggcca ttcatctctg ggtgtgccac tgaaccatca ggtaggacct
      481 tatgaagacc aggaatatgg acaggcactg tatgaacgta aggagttggg gagcagctcc
      541 agttctctgt cccttcagat gcacaaaagc actcccaccg gagaaaaacc ttccaacaat
      601 aaaaactttg aagaagacct tccttgtgtc aaatccagcc aaatgtatga acaaaatggt
      661 tgcgcaaaga agtcttatat gcacaaggca tgtgggaaag gtttcgcgca tcccagtcct
      721 ttacaaaggc atgagaaggt tcacagcgtt aagaagccct atgtgtgtga actgtgtggg
      781 aaaggctttg ctcggttggg taacctttta aggcatcaga gaactggcac aggtgagaat
      841 ccttttctgc ctgatcctta cacaaggtct cttccccgtt ctgcttgcct tagaagaaga
      901 atgagtattc acgctggtga gaagccctat gtgtgcgaac aatgcgggaa aacttttctt
      961 gattccactt actttcgaat acacagaagg attcacaccg gtgtgaaacc ctatgtgtgt
     1021 aagcagtgtg ggaaggcctt cactgcttcc cgctacctca aatcacacga gctgactcac
     1081 acccgggaga agtcttacgt gtgtgagcag tgtgggagcg ccttcacatt ttggtatcag
     1141 tttcagaagc acaaagtgac tcacagcggt gtgaatcctt acgtttgtaa gcagtgcggg
     1201 aaaggcttta cttactccag ttccctaaaa acgcatgaaa gaacccacac tggtcagaag
     1261 ccctacgtgt gtaagcactg tgggaaaacc ttcggtagtt ccggcaacct taaaagacac
     1321 ggaagcactc acactggcga gagactgtat gtgtgcaagc agtgtgggaa gtcgttcaat
     1381 aatcacagct cctttcagtt ccacaatcgg atgcacaccg gagagaaccc ctacaagtgt
     1441 aagcagtgtg ggaaggattt agcttcttcc tcctccctgc agaaccacga aaggaatcac
     1501 tctggagaga agccctatgc gtgtttgcag tgcgggaaag ccttcagttc cgacagctcc
     1561 cttcggaagc ataaaataat gcacagtgaa gaaaaaccct acgtatgcaa gcactgtggg
     1621 aagtctttcc gccgcttttt tgaggtccgg gtacacgaac gaatccacag tagcgagaga
     1681 ccctatgagt gcgagacgtg cgggagaggc tttttgagtt caactcatct gcgaaggcat
     1741 gtaccgattc acagtagacc aaataaggga attagtaagt aacatggtag ctctcacgaa
     1801 gtccccacgt gctagcaatg tggggaaatg tcagacagat tcgagagaag gtattctttt
     1861 gaattggtgt agctgttact actagaaatg ctcttctaat acacagaagc agacactgga
     1921 gaaaagctgc aagacacact tcagagttct tctcattgtg gagaagatgt gaaatagctc
     1981 acattggaga gaaaccttac gcacgccatg tgaaaagcct ttagtaatga ggggaccctc
     2041 aagagacatt gccctcattt ggacagacgt cctttatata tataatgtgg tgatctgaat
     2101 aagaatgttc cagacctgct tatagatgcc aatgtttaat taccagggag tggaattgtt
     2161 tgaaaggctt atgagagtta gaaggtccga ccctttttgt ctgtgagctt tctggaggtt
     2221 tgacaccgtg gggtggactg tgaggtttct aaaggccatg ccaggtcagt ccctcattct
     2281 ctctgtgctt gtggatcagg atgtagctcc cagacatgat gctaatggtc tgagtctctg
     2341 aaactgtaag caagctcaca ttaaatgctt tgtcttctga ga
//
