LOCUS       NM_001134585            2627 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 846 (Zfp846), mRNA.
ACCESSION   NM_001134585 XM_001070002 XM_343353
VERSION     NM_001134585.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Jan 1, 2009 this sequence version replaced NM_001134585.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.32553.1,
                                           SRR26643429.29277.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-274               JAXUCZ010000008.1  27396311-27396584
            275-363             JAXUCZ010000008.1  27406227-27406315
            364-490             JAXUCZ010000008.1  27406944-27407070
            491-562             JAXUCZ010000008.1  27409359-27409430
            563-645             JAXUCZ010000008.1  27409874-27409956
            646-2627            JAXUCZ010000008.1  27411372-27413353
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..2627
                     /gene="Zfp846"
                     /gene_synonym="RGD1564241; Zfp426l2; Znf426; Znf846"
                     /note="zinc finger protein 846"
                     /db_xref="GeneID:363022"
                     /db_xref="RGD:1564241"
     exon            1..274
                     /gene="Zfp846"
                     /gene_synonym="RGD1564241; Zfp426l2; Znf426; Znf846"
                     /inference="alignment:Splign:2.1.0"
     exon            275..363
                     /gene="Zfp846"
                     /gene_synonym="RGD1564241; Zfp426l2; Znf426; Znf846"
                     /inference="alignment:Splign:2.1.0"
     CDS             331..1974
                     /gene="Zfp846"
                     /gene_synonym="RGD1564241; Zfp426l2; Znf426; Znf846"
                     /note="zinc finger protein 426"
                     /codon_start=1
                     /product="zinc finger protein 426-like 2"
                     /protein_id="NP_001128057.1"
                     /db_xref="GeneID:363022"
                     /db_xref="RGD:1564241"
                     /translation="MVADCLTNCYQVSVTFDDVAVDFTQEEWILLDQAHRDLYREVML
                     ENYQNLASAGCEVIKPSLISWLEEEDLHREDLQEWEMPLGTQESTLHQDFLRGQTSSG
                     VQTGRSHSARELCYYTQCGEIFSEHSYFKTHVKTHSAWNTGHLTHSDHDASAQVHTIK
                     TYPCKICGKAFGRSSNLNRHLRSHTGEKPYECKECGKAFTTYSRLVEHFRTHTGEKPY
                     KCKDCGKAFAKRSGLITHISTHASEKPFACKECGKAFASSPRLSQHIRIHSGERPYIC
                     KECGRAFLTSSYLRNHVGRTHSGERPYICGECGKAFHSYSNLRRHVRTHSGERPYICK
                     ECGKAFLNSSYLHNHIRKTHSGEMPHICGECGKVFHASSYLRRHLRTHSGERPCICKE
                     CGKAFLNSSYLRKHLTIHTGDKPYECKDCGKAYRRYNLLHDHLKTHEVEKPFECDVCG
                     KSFQYFSYLTKHIRIHTGTKPYKCKYCGKDFTTSSSRTEHIRTHTGERPYECMECEKT
                     FTSSSNLIHHVKIHAREKPFVETVGKEAYDRFSLLTEHQ"
     exon            364..490
                     /gene="Zfp846"
                     /gene_synonym="RGD1564241; Zfp426l2; Znf426; Znf846"
                     /inference="alignment:Splign:2.1.0"
     exon            491..562
                     /gene="Zfp846"
                     /gene_synonym="RGD1564241; Zfp426l2; Znf426; Znf846"
                     /inference="alignment:Splign:2.1.0"
     exon            563..645
                     /gene="Zfp846"
                     /gene_synonym="RGD1564241; Zfp426l2; Znf426; Znf846"
                     /inference="alignment:Splign:2.1.0"
     exon            646..2627
                     /gene="Zfp846"
                     /gene_synonym="RGD1564241; Zfp426l2; Znf426; Znf846"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgcgga gggtcagttt aaggcgtggc tgtgtgagca gctcgctgag aggcggtccc
       61 tgtaggcccg aagcctggga cgggcgggtc tcacgggcac cccgcctctc tccggccgct
      121 gtgaatgctc tctgagctcc catctgctcg atcgccctct gcagaagcct ctctagccgc
      181 cttccagatt ccttttccag cacagaaccc cgccacgggc catcgccctg cagccgccgc
      241 ctccactgca caacccagcg attgtggagc tcgggagctc tgtgtcagga ctcagacccc
      301 attcttgaag aaaagagaaa ggtagaaaag atggtggctg attgcctgac aaattgttac
      361 caggtctcag taacttttga tgatgtggct gtggacttca cccaagaaga atggatttta
      421 ttggatcaag ctcacagaga cctctacaga gaggtgatgc tggagaatta ccagaacctg
      481 gcctcagcag gatgtgaggt catcaaaccc agtctgatct cctggttgga ggaagaggat
      541 ttgcacagag aagatctcca agaatgggaa atgccacttg gcacccaaga gtcaacattg
      601 catcaggatt ttttgagggg acagacttcc agtggagtac aaacaggcag aagccacagt
      661 gcacgagaac tctgttacta tacacaatgt ggagaaattt tcagtgaaca ctcatatttc
      721 aagacacatg tgaaaactca cagtgcgtgg aacaccggcc atctcaccca ctcagatcat
      781 gatgcctctg ctcaagtaca caccataaaa acgtacccgt gtaagatttg tggaaaagcc
      841 tttggacggt cttcaaatct caacagacac ctgcgaagcc acactggaga gaaaccctat
      901 gaatgtaagg agtgtgggaa agccttcact acctactcaa ggctagtgga acactttaga
      961 actcacactg gagagaaacc gtataaatgc aaggattgtg ggaaagcctt tgctaagcgg
     1021 tcaggcctta taacacatat atcaacccat gcttcagaga aaccctttgc atgtaaagag
     1081 tgtgggaaag cctttgcttc atccccacgc cttagtcagc atataagaat tcacagtggg
     1141 gagagaccct acatatgtaa ggaatgtggg cgagccttcc tcacttcctc atacctgcgg
     1201 aaccatgtag gaagaactca cagtggagag agaccctata tatgtggaga atgtggaaaa
     1261 gccttccatt cttactcaaa tctacgtaga catgtaagaa ctcacagtgg agaaagaccc
     1321 tatatatgca aggaatgtgg aaaggccttc ctcaattcct catacctaca taaccatata
     1381 agaaagacgc acagtggaga gatgccccat atatgtggtg aatgcgggaa agtcttccat
     1441 gcttcctcgt acctgcgcag acacttaaga actcacagtg gagagagacc atgcatatgt
     1501 aaggaatgtg gaaaagcctt cctcaactcc tcctacttac gtaagcatct aaccattcac
     1561 actggagaca aaccctacga gtgtaaggac tgtgggaaag cctaccggag gtacaatctg
     1621 ctacacgacc atttaaaaac tcatgaggtt gaaaagccat ttgaatgtga tgtatgtgga
     1681 aaatcctttc agtatttctc ataccttact aaacacattc gtattcacac tggaacaaaa
     1741 ccgtataagt gtaagtactg tgggaaagat ttcactactt cctcaagccg aactgaacat
     1801 atccgaactc acactggcga gaggccctat gagtgtatgg aatgtgagaa aaccttcact
     1861 tcttcatcca acctcattca ccacgtaaaa attcacgcta gagagaaacc ttttgttgag
     1921 actgtaggga aggaagccta cgatagattt tccctactaa ctgaacacca gtaactcacg
     1981 gtgagcagtc acttcagata gacggaatgc cagaaaccct tcatccccca cgtcttggtt
     2041 ttgtcagact gggacttata ctactaagaa gccaaggaat gtgcaaaagc ccccaactgt
     2101 aacagtttac tctgaaaaca tgaaaagagc tcatactcaa gatgtcccat gaatttaagg
     2161 aaatattaaa gccctcgcta cttaccagga ccttactaaa tgtgtgaggc ttcacagtga
     2221 gggaatcact gagtaagagt gatttactac ataaaaggtt gtagttctct taagtatttt
     2281 aaaatcactt gtcccaacac ttgagaaaac ctttatgaag gtaaagaatg ttagaaagta
     2341 acatgaactt aattctcggt gtttagtagc attataatcc atacccaagg gaaattagct
     2401 atatggaaat tgtatccatg tgtccggaag tgtggtgtgc tggcagcagt gaggcctgtt
     2461 gggtgatact tattttgaac ttttgtcctg attcctgtcc tgatagtcct ggagttatga
     2521 tacattttct ttccttcaaa caccaccatt tcatcttggt tgctacagct tctgggtagt
     2581 aagctgtgtt acgaggactt ttggactata aacattgttt aagtggt
//
