LOCUS       NM_001009537            4598 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 799 (Zfp799), mRNA.
ACCESSION   NM_001009537 XM_001078137
VERSION     NM_001009537.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4598)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 4598)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Feb 11, 2021 this sequence version replaced NM_001009537.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061577.1, SRR26643292.28699.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840106 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-141               JAXUCZ010000007.1  12561156-12561296   c
            142-268             JAXUCZ010000007.1  12554630-12554756   c
            269-329             JAXUCZ010000007.1  12554337-12554397   c
            330-4598            JAXUCZ010000007.1  12548664-12552932   c
FEATURES             Location/Qualifiers
     source          1..4598
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..4598
                     /gene="Zfp799"
                     /gene_synonym="Zpf799"
                     /note="zinc finger protein 799"
                     /db_xref="GeneID:494339"
                     /db_xref="RGD:1359692"
     exon            1..141
                     /gene="Zfp799"
                     /gene_synonym="Zpf799"
                     /inference="alignment:Splign:2.1.0"
     CDS             139..2088
                     /gene="Zfp799"
                     /gene_synonym="Zpf799"
                     /codon_start=1
                     /product="zinc finger protein 799"
                     /protein_id="NP_001009537.3"
                     /db_xref="GeneID:494339"
                     /db_xref="RGD:1359692"
                     /translation="MEPVTLEDVAVDFTLEEWTMLNLWQKQLYKEVMQDTLRNLCYIG
                     NKQEHQNIENEYENLWKKLSSQLLEKLCEYTEGHQCAEIFTWAPECAGNQKSCPGVPP
                     YESHVYEEVVIGHLSLNVPPHSHPGHKPYDVQECGKELYKHKESGSTSNPSTPFQKQR
                     RVHAEEKPETSHCKEDSRCLIFSHNDDRTSSGEQHYECKQCGKVFTSASSFRRHEEYH
                     SREKAYVCKQCGKAFPFPSSLQIHERIHTGEKPYTCKQCGKTFARSSSLLTHERIHTG
                     EKPYVCKQCGKAFTDRSSLRFHEMMHSGEKPYKCTKCGKAFASSGAFRKHERTHTGEQ
                     LFVCLQCEKVFSCESAFRTHKIIHSGECVCKQCGKAFTSHSSVKYHELMHSGEKPYVC
                     KQCGKTFRSPKQVQIHKRTHTGEKPYVCKECGKAFTFLGSLQYHELIHTGEKPYLCKQ
                     CGKAFRSSRQVQIHERTHTGEKPYVCKQCGKAFFSLYHLRRHEVIHSGTNPYVCKQCG
                     KAFSWFSTFHSHKQTHTGEKPYLCKQCGKAFCSRISWRRHEKAHTTVKPYACVQCGKA
                     FRSPSYLKIHERIHTGEKPFICSQCGKPFRSFRYVKSHERSHTGEKPFVCTECGKAFS
                     YYSSFHRHRRTHQTVTLNTELEKTS"
     exon            142..268
                     /gene="Zfp799"
                     /gene_synonym="Zpf799"
                     /inference="alignment:Splign:2.1.0"
     exon            269..329
                     /gene="Zfp799"
                     /gene_synonym="Zpf799"
                     /inference="alignment:Splign:2.1.0"
     exon            330..4598
                     /gene="Zfp799"
                     /gene_synonym="Zpf799"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggtgccatt gtgtgtcccg gccatattgt cgtccagtat atttggctga ggcccctaga
       61 tctctctcct ccgtatctgt gtcccctcca ctgactgcag gagtcgcagg aggacaacag
      121 gacacccagt gactgaaaat ggagccagtg accttggagg atgtggctgt ggacttcacc
      181 ctggaagagt ggactatgct gaacttatgg caaaagcagc tctacaaaga ggtgatgcag
      241 gacaccttga ggaacctgtg ctatatagga aacaaacagg aacaccaaaa tattgaaaat
      301 gagtatgaaa atctctggaa aaaactaagt agtcagttgt tggagaaact ctgtgaatat
      361 acggaaggtc atcagtgtgc agaaatcttt acctgggctc cagagtgtgc tggaaaccag
      421 aaatcatgtc caggagttcc cccatacgaa agccatgtct acgaagaagt ggttattggc
      481 catttatctc tgaatgtccc ccctcattct cacccaggac acaaaccgta tgatgttcag
      541 gaatgtggga aagagttgta taaacacaaa gaatctggga gcacctccaa tccttccaca
      601 ccctttcaga agcaaagaag agtccacgct gaggagaaac ctgaaactag tcactgtaag
      661 gaagactcta ggtgtctcat cttcagtcac aatgatgaca ggacatccag tggagaacag
      721 cactatgaat gtaagcagtg tgggaaagtg ttcacttctg ccagctcttt tcgaaggcac
      781 gaggaatatc acagccgaga gaaagcgtac gtttgtaagc agtgtgggaa ggccttcccc
      841 tttcctagtt ccctccaaat acacgagagg attcacaccg gtgagaagcc ctatacgtgt
      901 aagcagtgtg ggaagacctt cgcccgctcc agttccctcc tgacacatga gagaattcac
      961 accggagaaa agccctacgt gtgcaagcag tgtgggaaag ccttcaccga tcgcagctca
     1021 cttcgattcc acgaaatgat gcacagtggc gagaagccat ataagtgcac gaagtgcgga
     1081 aaggcttttg cttcttcggg cgccttccga aaacatgagc ggactcacac aggagagcag
     1141 ctcttcgtgt gtttgcagtg tgagaaagtt ttcagctgtg agagtgcatt ccggacacat
     1201 aagataattc attctggaga atgcgtgtgt aagcagtgtg gcaaagcctt caccagtcac
     1261 agttccgtca agtaccacga actaatgcat agcggagaga aaccctatgt atgtaagcag
     1321 tgtgggaaaa ccttcaggtc tcccaaacaa gttcagattc ataaacgaac tcacactgga
     1381 gaaaagcctt acgtttgtaa agagtgtggc aaagctttta ctttcctcgg ctcccttcag
     1441 taccacgagt tgattcatac cggtgagaaa ccttatctgt gtaaacagtg cgggaaagcc
     1501 ttcaggtctt ctcgtcaggt tcagatacat gagcgaactc acactggaga gaaaccctat
     1561 gtgtgtaagc agtgtggcaa agccttcttt tctttgtatc atttaagaag acacgaagtg
     1621 attcacagcg gcacgaaccc ctacgtttgt aagcagtgcg ggaaagcctt cagttggttc
     1681 agcacctttc atagtcataa acagactcac actggcgaaa agccctattt atgcaagcaa
     1741 tgtggaaaag ccttctgtag tcgcatatcg tggagaaggc atgagaaagc tcacactaca
     1801 gtgaagccct atgcgtgtgt gcaatgtgga aaagccttcc gttctcctag ttatctcaaa
     1861 atacacgaaa ggatccacac tggggagaaa ccctttatat gttctcaatg tgggaaaccc
     1921 ttccgatctt ttcgttatgt caaatcccat gagagaagtc acactggaga gaaacccttt
     1981 gtgtgtacag aatgtgggaa agccttcagt tattatagct ctttccatag acacagaaga
     2041 actcaccaga cagtaacctt gaacacagag cttgaaaaga cttcataaca cccataagat
     2101 tgcatatgga gaaaaactgt aaaagttaag cgagtgaaac acctggttct actcatgggt
     2161 aaaggaaact ttaggccaga catggtgtgg cacaccctta atcccagcac ttgagaggca
     2221 gaggcaggga atctgagttc agggccaacc tcatctatat actgagttcc ctagtcaccc
     2281 atgactacat agtgtaactg tttcaaaaaa aggaaaaaac atgtttgtct gaagagcaag
     2341 tttgactaga agagaggtct tcattggtac atgtgcatat gcttccccag taaaatcttt
     2401 gctcggcaaa gcaaaagaaa ctcaagagta acaagtagtg gcctagtcct ttgacaatgt
     2461 ttcagatgtt cattacccta aatgtcagca atgggaaaaa cttgatacag atttttgttt
     2521 aagaatgctt tagaaaatgc agaatctgaa gaaactatgt aaatatattg aacacactgg
     2581 aatttattag ggatttgttt ttgcttttca gaaatagtct tgccatgcaa cacaggctgg
     2641 cctcgaacca attataagtc tttctgtttc aacctctaga gcgtgtgggt gaaagatgtc
     2701 tgcttccaca tctagcatca gtagttcata ctcccctcac ccctttgaaa ttctccagaa
     2761 acggtttctc cgtgtagtac tggccatccc agaactccag accacgctgg tctcatctca
     2821 cgagatgcac ctgtctctgc ctccctagtg cttggattaa aggtgtgtgc caccaccgcc
     2881 tgacatgctt agaccttttc gaactccatg cttcacattt ttgctgtaga aaactgtctc
     2941 tattgtagtt aatttttttt taaagattta ttcatttatt atatatacac tgtagctgtc
     3001 ttcagacaca ccagaagagg gcatccgatc ccattacaga tgggtgtgag ccaccatgtg
     3061 gttgccggga attgaactca ggacctctgg aggagcagtc agtgctccta accgctgaac
     3121 catctctcca gcctgtagtt aatttttaaa attatgtgtc cgcgcatgtg tctgtttaga
     3181 tatgtgcaca tccatgtagt tcctgaagag gccaaaaggg ggtgtcggat ctcctggggg
     3241 tggagttagt agtgagtgtg agctgtccca taggggggaa tggaactgag tcatggtctt
     3301 aggactgttc tgtgcaagaa actggcactg accatttctc tagcccctag aaaattatct
     3361 tgaaggtgtg tatgtgagat gaaggactat ttaagtacag ctaatggaaa cctaaaagac
     3421 cttaaagata attaaaaaca aaaagtgcac tatcgctaca ttaattttaa ttttgtaagt
     3481 tttttttaaa gcagtatata cagatttaat gggcgatatc tttttgtatc aaatcaggta
     3541 ttttttttct ttaacgtaga tccattcact ggtgagttga taattactcg taatatgcca
     3601 ggaggcataa acagtgtctt gatttcaagc ctttgagatt aatgggtggg gggaaaatga
     3661 ctttttgtgt attttgcccc cacttcattc acaggacaag ttgttagcat ttttttgtgt
     3721 cattctcttc cgtgaacaga aaccacatag tatacttttt ttgttagctt ttctccctcc
     3781 ctgatgtggt ttttttttct agcacttctt atctccatga cctttaagct gttttcagac
     3841 cactttaaga ttaacaaatg ttaactcctg tctacgcaga gggtaggtat aaatgtcact
     3901 ctgtaatcat agatcaacat cacacttata agctgtttct atgtcacaag ccatttttac
     3961 tatacctgta tatttaattt tgtctcctta taagtgttgc tttttcatgt ttattgtatc
     4021 tttgatgttt attgtaattt ctgtcatcat actaagatac gttggcatta gtggtttctt
     4081 gtcaaagact gttaggtacc acgtagtaaa tcgtactgga tctctccatg tgcagtgact
     4141 gaatgcgcct cgtcagtaag agcattgcat agatgttctt gtttcgctca caaggaccaa
     4201 tgagattggt taaatgtagt taggtgcctc ttgaatatac tgagatgtga gtataattct
     4261 gcatttggta atcgtcgtta acttggaggt cctcaagtaa tgcggggagg gaaggtttaa
     4321 tccatgagca tggcttcacg catgagtgag gagagggcac tttgctcatt ctcgagattc
     4381 agaatgtttt atgcttcctt ggttttgcgg acagccttac agagtggcct ttcttttgtc
     4441 atactttggg acacctccct tcccagcaga aggtttgccc ttgctttgag cacctgtgtt
     4501 ctggaccggt ttttaacctt tctgggtttc tgtaccaaca caatatttcc tttaatatac
     4561 tggccactac tcttcacaaa tacagacgtt cctaatta
//
