LOCUS       NM_001409279            4352 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 420-like (Zfp790), mRNA.
ACCESSION   NM_001409279 XM_039093705
VERSION     NM_001409279.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jul 12, 2022 this sequence version replaced XM_039093705.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.1534.1,
                                           SRR26643299.1953.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                JAXUCZ010000001.1  94166366-94166463
            99-173              JAXUCZ010000001.1  94172098-94172172
            174-297             JAXUCZ010000001.1  94173789-94173912
            298-393             JAXUCZ010000001.1  94174212-94174307
            394-4352            JAXUCZ010000001.1  94176808-94180766
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..4352
                     /gene="Zfp790"
                     /note="zinc finger protein 420-like"
                     /db_xref="GeneID:102547413"
                     /db_xref="RGD:150344952"
     exon            1..98
                     /gene="Zfp790"
                     /inference="alignment:Splign:2.1.0"
     exon            99..173
                     /gene="Zfp790"
                     /inference="alignment:Splign:2.1.0"
     CDS             165..2507
                     /gene="Zfp790"
                     /note="zinc finger protein 420"
                     /codon_start=1
                     /product="zinc finger protein 790"
                     /protein_id="NP_001396208.1"
                     /db_xref="GeneID:102547413"
                     /db_xref="RGD:150344952"
                     /translation="MAHVMTFRDVAVDFSPEEWACLSLEQRSLYRDVMLENYSHLVSV
                     GLCIYQPHVFPVLEKEQDACVDLSNETSRFLPDTDSGWQMKKVLPKNSIFGSRLSRWE
                     VMRMERNQGLEGSSPGVDWEDKGQDQSQNENQEERLKQMTLTCDKLPLLNLLTAFNQC
                     PRLNTAEKAKEFKSEKSFSFAPEPSQLQLIHTDAKFREDKSCGKTFPPGPKLPRYRAV
                     PAGKKAFQCEECGKAFSFRSSLTGHKRIHTGEKPFKCKECGKAFRFHSLLSVHVRTHT
                     GEKSYECKECGKYFNYSSDLTRHHRIHTGEKPYQCRECGKAFSCGSDLTRHQRIHTGE
                     KPYECHECGKAFIQQSHLIKHQRIHTGEKPYVCKECGKAFTCGSQLSQHRKIHTGDKF
                     HKCKECKNSFSFALDHTQRQLIYIGEKFFEDKENGKAFFPDAEFPQYDTAPSGKKLYE
                     CKECGKAFSLRAIVSSLKKIHNREKLFKCKDCEKAFRCPSDLSRHQKIHTGEKPYKCK
                     ECGKGFICRSDLGRHQRVHTGVKPYECKECGKAFTRGAHLTQHQKIHSKKSHDFNEGE
                     KAFGSGSDHTPGSLIDTGEKCWEGKEYGETVLHDPERTQPQTAKTTYDCKEKGKDFSW
                     RSRDTDLKTVHIREKRFQCKECPKAFRYSSELTRHQRLHTGEKPYKCQECWKAFASAS
                     DLARHQRIHTGERPYECNECGKAFIQQSHLIKHQRVHNVEQPKDVMSAEKSSPGSQML
                     LNMREFTLVNNLINLRSVGKILLMAQLSQCPKVYTDEKLS"
     exon            174..297
                     /gene="Zfp790"
                     /inference="alignment:Splign:2.1.0"
     exon            298..393
                     /gene="Zfp790"
                     /inference="alignment:Splign:2.1.0"
     exon            394..4352
                     /gene="Zfp790"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgctggaag ttggagccgc agaccagaat gtaggatccc agcgtctgag acccacctag
       61 cagtggcagt ttgaccaaga ggaagcctgc ctcgtcctga gctggcctca tcaacatagg
      121 aatcaagaag aggactgact ggtcactttt aggagtttca aatcatggct catgtaatga
      181 cgttcagaga tgtggccgta gacttctctc ccgaggagtg ggcgtgtctg agcctggaac
      241 agaggagtct atacagagac gtgatgctgg agaactacag ccacctcgtc tccgtgggac
      301 tttgcattta tcaaccgcat gtgttccctg tgttggaaaa agaacaagat gcctgcgtgg
      361 atttgagcaa tgagaccagc agatttctcc cggatacaga ttccgggtgg cagatgaaga
      421 aagtcctacc aaaaaacagc attttcggaa gtcggttgtc gcgctgggag gtaatgagaa
      481 tggagagaaa ccaagggctc gaaggctcga gtcctggagt cgattgggaa gataaaggtc
      541 aggaccaatc acaaaatgag aatcaagagg aacgtctcaa gcaaatgaca ctcacctgtg
      601 acaaattgcc ccttttgaat ctgctcacag cttttaatca gtgtccaaga ctgaatacag
      661 cagagaaagc gaaggaattt aaatctgaaa aatcctttag ttttgcaccc gagccctctc
      721 agcttcagtt aatccacaca gacgcgaaat tccgggaaga taaaagctgc ggaaagacct
      781 ttcctcctgg ccctaaactt cctcgctacc gtgcagttcc cgccggcaag aaggcatttc
      841 agtgtgagga atgtggcaag gcgtttagct tccgctctag cctcacgggt cacaagagaa
      901 ttcacaccgg ggaaaagcct ttcaaatgta aggagtgcgg gaaagccttc agattccatt
      961 cactgctcag cgtccacgtt cggactcaca cgggcgaaaa gtcatacgaa tgtaaggaat
     1021 gcggaaagta cttcaactac agctcagacc tgacccgcca ccaccggatt cacactggag
     1081 agaagcccta tcagtgcagg gagtgtggga aggccttcag ctgcggctca gaccttactc
     1141 gccaccagag gatccacacg ggcgagaagc cctacgagtg tcacgaatgc ggaaaggcct
     1201 ttatccagca gtcgcacctc attaaacacc agagaatcca cacgggcgaa aaaccttacg
     1261 tgtgcaagga gtgcgggaaa gccttcacgt gcgggtccca gttaagtcag cataggaaga
     1321 ttcatactgg cgataagttc cataaatgta aagaatgtaa aaactccttt agtttcgccc
     1381 tagaccatac ccagcggcag ctaatttaca tcggggagaa gttctttgaa gacaaggaaa
     1441 acgggaaggc gttctttccc gacgccgagt tccctcagta cgacacagct cccagcggta
     1501 agaaactgta cgagtgtaaa gaatgcggca aggctttcag tctgcgcgcc atcgtcagca
     1561 gcctcaagaa aattcacaac cgggagaaac tctttaaatg taaggactgc gagaaggcct
     1621 tccggtgccc ctcagacctc tcacgacatc agaagattca cacgggcgaa aagccctaca
     1681 agtgtaagga atgcgggaag ggctttattt gcagatccga cctgggccgg caccagagag
     1741 ttcacaccgg tgtgaagcct tacgagtgta aggagtgtgg gaaagctttc actcgcggag
     1801 cccacctgac ccaacaccag aagattcaca gtaagaagtc gcacgacttc aatgaaggag
     1861 agaaggcctt tggttctggt tcagaccaca ctccaggatc cttgattgat accggcgaga
     1921 aatgctggga aggtaaggaa tacggagaga ccgtccttca tgacccagag cgtactcaac
     1981 ctcagactgc taagacaaca tatgactgta aggagaaggg caaggacttt agttggcgtt
     2041 cacgtgatac ggatctcaag acagttcata ttcgggagaa acgttttcaa tgcaaggaat
     2101 gcccgaaggc cttcaggtat agctcggaac tgacccgaca ccagagactg catactggag
     2161 aaaagccata taaatgtcag gagtgctgga aggcatttgc ttctgcctca gacctcgccc
     2221 ggcaccagag gattcacacc ggtgagcggc cctacgagtg taatgagtgc ggcaaagcct
     2281 tcattcagca gtcacatctc attaaacatc agagagttca caatgtcgag cagcccaagg
     2341 acgtgatgag tgcggaaaaa tcatcgcctg gcagtcagat gctgttaaac atgagagagt
     2401 ttacactggt caacaatctt ataaatttac ggagtgttgg aaagattctg ctcatggccc
     2461 agctcagtca gtgtccaaag gtttataccg atgagaaact aagttaaggt ggggaactgg
     2521 gaaaagccta tttctgagtc tcaaatccta cccagcacta gaatgtccac atgggtggga
     2581 agtctgggga aaccttcagc tgtaactcaa gtgtgtccat gtccatctgt ggcggtagag
     2641 agtcccacag tgttagcaat gtggagacgt ttgtgggttc agtgtcttgc tcaaagggag
     2701 aagattcatg ggaggagact ggatataagg aatatggaaa gacctttctt catggtcttc
     2761 aatagacatc tataaaatca tgctgactaa gagaactgaa ttcaagggat ttggaaacat
     2821 tcattcatga ttctgaacct aactggtagt aaatactcaa gaggcgtagg aaagtgtgga
     2881 aatgcctttc agaatcacag tgttagagag cgtagactgg cgagcaaccc tggctgtccg
     2941 agaaaggtgg aaaacctttg atcttggact tgcctctcat gtgacagccc cataaaggtt
     3001 atgaaaagtg actttagtta gtcaacaccc ggacatttat acttcctcct gtggagcgaa
     3061 gcccagaccc tgtgcgtgct gaacacgaat tcctgtttct tagctgcacc tctgaccctc
     3121 atgtttgagg aagcccatga agataaataa atatatggag atgttttaca caaaaacaag
     3181 aaaagctaat ttatttctaa ctcactgagt taattttgtt ttttagtaaa aaaagagctt
     3241 ttggtaaaat aacatgtctg tcatccaacg tcatgatgta atggctgtta atttaggaaa
     3301 agctttactg gtgggttatt tatgtatggt gaggatgtct tataagagaa gtggtatata
     3361 gctctattgc agaatatttg tagtgacatg taaatgtgta acatatgtga gacgtgattt
     3421 ttatatgtgt cctagggaaa ctttgaagtg cttgtgtttt tgtttttttt tttttttttt
     3481 tttcggagct gaggaccgaa cccagggcct tgagcttgct ggcctctacc actgagctaa
     3541 atccccaacc cctctaagtg cttgtgtttt aatacaacat agaaagtcca aaagaatttt
     3601 taaaaaaatt cagaattgca ttttaaaagt tctgtgaggg ctggagatgt ggttcagttg
     3661 gtagagtgtt tgcctggcct gcacgaagcc ttaggtctgt tctccagctg tataagcagg
     3721 cattgtggca tctgcctgcc ttcgattcta gatctcagaa gttcaaggtc aaccaggagt
     3781 tcatgagtct gtctcaaagg aaaaggaaaa tcgtgtccaa ctaaggttac cggagatcca
     3841 taatatagat ttacatacac acacacacac acacacacac acacacactc tgtaggctca
     3901 tttagcttaa ttctttttta ttttattttt tttttttttg gagctgggga ccgaacccag
     3961 ggccttgtgc ttgctaggca agcgctctac cactgagcta aatccacagc ccctagctta
     4021 attcttatat ttgaaaagtt tcagccataa aggtaaatga ctcgtcacgg aagagctgag
     4081 ccttacatgg aaagggatgg tgacgctggc ttcgtctgag cgttttctgt gggtgggcga
     4141 cagttctgaa cgatgtcctg agtgtcatac aggtgcagtt cctggtgcct cttagtacca
     4201 tgtgttatat acacgattgc gagtgagtac atacagggca tttaaacgtg tctcatgtgc
     4261 atgccattct gaaattactg ttatctatga acattaccac ttggagaatt ttgtcatcta
     4321 tctttactgt aataaagcca tattcactct tg
//
