LOCUS       XM_006228941            4317 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 788 (Zfp788),
            transcript variant X1, mRNA.
ACCESSION   XM_006228941
VERSION     XM_006228941.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006228941.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006228941.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4317
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4317
                     /gene="Zfp788"
                     /note="zinc finger protein 788; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, 10 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 229
                     samples with support for all annotated introns"
                     /db_xref="GeneID:102555672"
                     /db_xref="RGD:7701959"
     CDS             1384..3975
                     /gene="Zfp788"
                     /codon_start=1
                     /product="zinc finger protein 14 isoform X1"
                     /protein_id="XP_006229003.1"
                     /db_xref="GeneID:102555672"
                     /db_xref="RGD:7701959"
                     /translation="MDLVVFEDVAVNFTEEEWALLDSSQKHLYRDVMLETYSNLACVG
                     NEWEEQSMEEQHRNPRRSQRMCTCERLYESTEGCQSGEIFTKTPHLTNIFPGPKVELE
                     ENDRIQYKCEQTWTTLYSVTSIQTYTQSLNMSGPYNVCGTSFGFPSSFGRYQEIPVGE
                     MYYEQKEKNCVSVKSFYTYERNDKAAIDNDRKPFHRPQSSFGSCESHGRINTRKRSYE
                     CKLCSKSFMYPSLLQKHEITHSREKPYRCLQCGKAFRNLSSLQKHNIVHTEEKPYKCP
                     YCNKVFICQGSLQSHIRVHTGEKPYECKQCGKAFRVNSSFWRHKKVHTGEKPYECKQC
                     GKSFIYPSLLQTHERTHSAEKPYNCKQCGKAFKSHSSLRVHERNHTGEKPYECKQCGR
                     SFIYPCLLQIHERTHSGVKPYGCKQCGKAFRRLSDLRVHERIHTGEKPYECKQCIKSF
                     INRYLLKMHQKSHTGEKPYKCKMCSKAFIYPSLLKLHERSHTGEKPYPCKQCDKAFIF
                     PSLLKMHERTHTGEKPYACKQCGEAFKSYNSLQRHKRIHTNVKPYECKHCSKTFICQR
                     SLQLHNRTHTGEKPYKCEECGNSFRYHNSLQRHRIIHTGKNLYECKQCDRSFIYPYLL
                     QIHDRTHSGGKPYECKQCGKSYIYPSLLRIHERTHSAEKPYNCKQCGKAFKSHSSLRV
                     HERNHTGEKPYECKQCGRSFIYPCLLQIHERIHSGVKPYECKQCGKAFRGHSSFRIHK
                     KLHSGEKPYECKQCGKCFVYPSLLRMHERTHSSEKPYDCKQCGKAFKSRSSLREHERN
                     HIEEKSYQCQQCGKIFRRYSSFQNHKQIHAIEKLNECKQCGKIFIYPSFLQRHERTHI
                     CERTLYM"
ORIGIN      
        1 agagagagca aatagtcctt ttatatcaag ccaggctctt acctggctgt tgctaggtaa
       61 ctgttgagtg gatcatggag gaaatgacta ttattgatga atgtttgttc ttacacacat
      121 agacagagat ctttgaaatt gtcccaacat tacaataatc aaaatggtgt actaacactt
      181 gggaacgaac agagtaacaa aacagtataa tcagaaactt aaccaaaaag aaattagaat
      241 gtcttacggt ccaacaccaa aaggccacct gttccagtaa gagaagccta cgccttcaac
      301 tcaagtcaga aggtgtagac aggcagatct atgtgagttc tagaccagct tggtctacat
      361 gccaagttct atccactgaa agttacttaa tgagactcgg tcttttataa aaatctgcaa
      421 ttaaaaaccg ccaaaatcat cactgccgct gggcccacac agcatcagcg tcaaaagaag
      481 cttctgggcc gcgggtcgct aggaggagtc aatctcaggt ttccaaagac tacagaatgc
      541 tctcccattg tcaccctggc ccagccccag gaaagatgac cagagccaac tcagtcggat
      601 gccctactcc gtaagggatg gctgctactc gcttacataa ggttcaaaat ggcgcggttc
      661 cgcgctgtcc tcatggctcc gcagagggcc cacagcacac tgcactcctg cccacccgat
      721 atctctcccg cagaggcaaa gcagaacacc gagcaccgcc aggagggaaa acccgcctcc
      781 tacctgtgct tctgagggaa cagcatgtcc cgatgccctg attggctaaa gagttgtgag
      841 tgacagaaat tgtctttggt ggaaaggaga aattataggt aaagccacag tccttcccag
      901 tcgggagttt cgctaaaggt gaagacctgt ttcagatcca gggaaaattg catttaagca
      961 caattgtgta gtgggcagtg cacatgagcg atcctgtgct ctgaagcaag tcgtgcctga
     1021 taagtgccag aagacagccg tgcaagctct gggaggaaga aacattttct gtgtacatgt
     1081 agatctcact ggagctcact caggtccaca ctcaggggag aaggcagggc tgggagtgaa
     1141 aggctgtacc ggtcccttct gcccttagcg gtttaaggtt gctgtcactc aaacattact
     1201 agccaatcag agcctccaag taggcagtcc aatcgagtgc cagcgggagg cgggacttct
     1261 tggccgccat gctccctgct aggctctaag gctgaggtag tcgctttgga gacgctgctc
     1321 tgtagggaga gcaccgctgt ggcaaattat gagaagagtg cgggtgagcc tggaagccgc
     1381 gctatggatc tagttgtctt tgaggatgtg gctgtgaact tcaccgagga agagtgggct
     1441 ttgctggatt cttctcagaa gcatctgtac agagatgtaa tgctggaaac ctacagtaac
     1501 cttgcttgtg tcggaaacga atgggaagag cagagcatgg aggagcagca cagaaatccg
     1561 aggagaagtc agagaatgtg tacatgtgag agactatatg agagtaccga aggttgccaa
     1621 tctggagaaa tctttaccaa gacaccacat ctgacaaaca tcttccctgg tccaaaagtt
     1681 gagcttgagg aaaatgacag gatacagtat aaatgtgaac agacctggac aacattgtat
     1741 tctgtcacaa gtattcaaac ctatacgcaa agcctcaaca tgagtgggcc ttataatgta
     1801 tgcggcacat ccttcggttt tcctagctca tttggaagat atcaagaaat tcctgttgga
     1861 gaaatgtatt atgaacagaa ggaaaagaac tgtgtttctg ttaaatcatt ttacacatat
     1921 gaaaggaatg acaaagcagc aatcgataat gaccgaaaac catttcatag accccagagt
     1981 tcttttggtt cctgtgaaag tcatggaaga attaatacaa gaaaaaggtc ctatgaatgc
     2041 aaactatgta gtaaatcttt catgtatcct tctttacttc aaaaacatga aataacccat
     2101 tcccgtgaaa aaccctacag atgcctacaa tgtgggaaag ctttcagaaa tctcagttct
     2161 cttcagaagc ataacatagt tcatactgag gaaaagcctt ataaatgtcc ttattgtaat
     2221 aaagtgttta tctgtcaggg atcacttcag tcacatataa gagttcatac tggggaaaag
     2281 ccttatgagt gtaaacagtg tggtaaagct ttcagagtta acagttcctt ttggcggcat
     2341 aaaaaagttc atactgggga aaagccctat gaatgtaaac agtgtggtaa gtccttcatt
     2401 tatccttctt tacttcaaac ccatgaaaga actcacagtg cagaaaaacc ctataactgt
     2461 aaacagtgtg gtaaagcctt taaatctcac agttcccttc gagtccatga aagaaaccat
     2521 actggggaaa agccctatga atgtaagcaa tgtggcagat cctttattta cccctgctta
     2581 ctccagatcc atgaaagaac tcacagtggt gtcaaaccct atggatgtaa gcagtgtggg
     2641 aaagcgttca gacgcctcag tgaccttcga gtacatgaaa gaattcatac tggagaaaaa
     2701 ccttatgaat gtaaacagtg cattaaatct tttattaatc ggtatttact taagatgcat
     2761 caaaagtctc atactggtga gaaaccctat aaatgtaaga tgtgcagtaa agccttcatt
     2821 tatccttcct tacttaaact gcatgaaaga tctcacactg gggaaaaacc ctatccatgt
     2881 aaacaatgtg ataaagcctt cattttcccc tctttactta aaatgcatga aagaactcac
     2941 actggggaaa agccttatgc ttgtaaacag tgcggtgaag ccttcaaaag ctacaattcc
     3001 cttcagagac ataaaagaat tcatactaat gtaaagcctt acgaatgtaa acattgtagc
     3061 aaaaccttca tatgtcagag atcccttcag ttacataata gaactcatac tggagaaaaa
     3121 ccatataaat gtgaagagtg tggtaactcc ttcagatacc acaattccct tcaaagacat
     3181 agaataattc atactgggaa aaatctctat gaatgtaaac agtgtgatag gtccttcatt
     3241 tatccgtatt tactccaaat acatgacaga actcactctg ggggaaaacc ctatgaatgt
     3301 aaacagtgtg gtaagtccta tatttatcct tctttactac gaatacatga aagaactcac
     3361 agtgcggaaa aaccctataa ctgtaaacag tgtggtaaag cctttaaatc tcacagttcc
     3421 cttcgagttc atgagagaaa ccatactggg gaaaagccat atgaatgtaa gcaatgtggc
     3481 aggtccttta tttacccctg cttactccag atccatgaaa gaattcacag tggtgtgaag
     3541 ccttacgaat gcaaacagtg tgggaaagcc tttaggggtc acagttcctt tcggattcat
     3601 aagaaacttc acagtgggga aaaaccctat gaatgtaaac agtgtggtaa gtgcttcgtt
     3661 tatccatcct tacttcgaat gcacgaacga actcatagta gtgaaaagcc ctatgattgt
     3721 aagcagtgtg gtaaggcctt taaatctcgt agttccctcc gagaacatga aagaaaccac
     3781 attgaggaaa aatcctatca gtgtcaacag tgtggtaaaa tcttcaggcg ttacagttca
     3841 tttcaaaacc ataaacaaat ccatgctata gaaaaactca atgaatgtaa acaatgtggt
     3901 aagatcttca tttatccttc ttttcttcag aggcatgaaa gaactcacat ttgtgaaaga
     3961 accctatata tgtaaacaat gtgattaaag ctttaccata ttacaattct tttaggagag
     4021 ataaatttca ttctgagggg gtgtgtagat atgaataatg taataaagcc atttttacag
     4081 tcgtcttcaa ctgcagagaa aaattcatat gtaacaattg gagtatgtga gaaagccttc
     4141 tgaaagtaac catccccttc aaatgtatgg aataactcat aatgaagtag aaccatgttc
     4201 cctatgacat taaaaattgt catgttagaa gggaatcctg taaatataaa caatgtgaaa
     4261 actcatgtag tgaaaatttt ggaatttttt taaaaaaaat ataagaatat gttttca
//
