LOCUS       XM_039100842            2757 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 780B (Zfp780b),
            transcript variant X1, mRNA.
ACCESSION   XM_039100842
VERSION     XM_039100842.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2757
                     /gene="Zfp780b"
                     /note="zinc finger protein 780B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 131
                     samples with support for all annotated introns"
                     /db_xref="GeneID:102554136"
                     /db_xref="RGD:1592570"
     CDS             100..2607
                     /gene="Zfp780b"
                     /codon_start=1
                     /product="zinc finger protein 59 isoform X1"
                     /protein_id="XP_038956770.1"
                     /db_xref="GeneID:102554136"
                     /db_xref="RGD:1592570"
                     /translation="MASSSSQHRACGSVTFRDVAIDFSKEEWACLDATQKVLYRDTML
                     ETYRHLVSVVGRCISKPHLITLLEQEKEPWMAVNEETDRPSPELETGYDAENISPENP
                     INNGKFLKQSIKQLSRTFDFKDSSSSNGPNYSTFHGLKDCQGDADQQITNKEEMPPYT
                     CQTLAHNIERAYECKECGKCLGCRSTLTQHQTIHTGEKPYECKECGKAFRLPQQLTRH
                     QKFHSGEKPFKCNECGKAFHLPDLLKYHKTIHTGTKPFECRECGKAFNRVSNLVAHRI
                     IHADVKPYECNECGKAFKRRSNLVQHQKIHSDERPFQCKDCGKGFIVLAQLTRHQNIH
                     TGEKLFECHECGKAFRLPQQLTRHQKSHSGEKPFKCNECGKAFHLPDLLKYHKTIHTG
                     TKPFECRECGKSFNRVSNLVEHRIIHADVKPYACNQCGKAFKRQKSLMQHQKIHLGER
                     PFQCKDCGKAFIVLSHLTRHQTIHTGEKSFECNECGKKFRTATHLVMHQSIHTGEKPF
                     ECNVCGKAFRLQVYLSEHQKTHMEEKHFECNVCGKVFRLQVYLSEHQKTHTEEKPFKC
                     KLCGSAFRSKYQLSKHHTIHTDEKPYQCKECGKCFRQRSNFTDHQSIHTGKKPFQCKE
                     CGKFYRLNTLLIRHQKSHSGERPYECKECGKAFHLPSELNNHQIVHTSKRPFECKVCG
                     KSFKRESTLIQHGAVHAGVKSYECSECGKAFIHRSSLLHHRKIHSDEKPFKCQECGKA
                     FVVLAYLTRHQSIHNGEKSFECHQCGSTFKYKSQLNKHQRSHTDVKLFQCMEGGNDFV
                     PGIDLRINQGVCTGESPFQCNEYGEHFQHHNQFSWTY"
ORIGIN      
        1 gctctggcgg cgcaatcgcg gacgatcaga tctttcaggt gggagtagaa aattgttctg
       61 tgtcttcggt ctccgcggag ggaagaagcc tgaagaagaa tggccagctc cagttctcaa
      121 cacagggcct gtgggtcagt gacatttagg gatgtggcta ttgacttctc taaggaggag
      181 tgggcctgcc tggatgctac tcagaaggtc ctctacaggg acacgatgtt ggagacctac
      241 cgccacctcg tctcagtggt ggggagatgc atttctaagc cacatctgat caccttacta
      301 gagcaggaga aagagccctg gatggctgtg aatgaagaaa cagacaggcc gagcccagag
      361 ttggagacag gttatgatgc tgaaaatata tctccagaaa atcctattaa taatggaaag
      421 tttctcaaac agagcataaa gcaattaagt agaacttttg acttcaagga ctctagttct
      481 agtaatggcc ccaactatag tacattccat ggactaaagg attgtcaagg agatgctgat
      541 caacagatta ctaacaagga agaaatgcct ccttatacct gccagactct tgctcacaat
      601 atagaaagag catatgaatg taaggagtgt gggaagtgct tgggttgtag gtcaactctc
      661 actcagcatc agactattca tactggagag aaaccctatg aatgtaagga gtgtgggaag
      721 gccttcagac tcccccaaca gcttacaaga catcagaagt ttcacagtgg tgagaaacct
      781 ttcaagtgca atgaatgtgg aaaggcgttt catcttcctg acctgctcaa gtaccataaa
      841 accatccata caggtacaaa accatttgaa tgcagggagt gtgggaaggc cttcaaccgg
      901 gtctccaacc ttgttgcaca taggattatt catgctgatg tgaaaccata tgaatgtaat
      961 gagtgtggga aagcctttaa acgtcgctca aatcttgtgc aacatcagaa aattcattct
     1021 gatgagagac cttttcagtg taaggactgt gggaaaggct tcattgttct ggcccagctc
     1081 actaggcacc agaacattca cactggagag aaattgtttg aatgtcatga atgtggtaag
     1141 gccttcagac ttccccaaca gcttacaaga catcagaagt ctcacagtgg tgagaaacct
     1201 ttcaagtgca atgaatgtgg aaaggcgttt catcttcctg acctgctcaa gtaccataaa
     1261 accatccata caggtacaaa accatttgaa tgcagggagt gtgggaagtc cttcaaccgg
     1321 gtctccaacc ttgttgaaca taggattatt catgctgatg tgaaaccata tgcctgtaat
     1381 cagtgtggga aagcctttaa acgtcaaaaa agcctcatgc aacatcagaa aattcatttg
     1441 ggtgaaagac cctttcagtg caaggactgt ggaaaggcct tcattgttct gagtcatctc
     1501 actaggcacc aaactattca tactggagag aagtcatttg aatgtaatga atgtggcaag
     1561 aaattcagaa ctgccacaca ccttgttatg caccagagta ttcatacagg tgaaaaaccc
     1621 ttcgaatgta acgtatgtgg gaaggctttt cggcttcagg tgtacctttc tgagcatcag
     1681 aaaactcaca tggaagagaa acactttgaa tgtaacgtat gtgggaaggt ctttcggctt
     1741 caggtgtacc tttctgagca tcagaaaact cacactgaag aaaaaccctt caagtgtaag
     1801 ctctgtgggt cagccttcag aagtaagtac caacttagta aacatcacac aattcatact
     1861 gatgaaaaac cctatcagtg caaggaatgt gggaaatgct ttcgtcaaag gtccaatttt
     1921 actgatcacc agagtattca cactggaaag aaacccttcc aatgtaaaga atgcgggaag
     1981 ttttacagac ttaacacact tctcattcgt catcagaaat ctcatagtgg tgagagacct
     2041 tatgagtgta aagaatgtgg aaaggctttt catcttccca gtgaacttaa taaccatcaa
     2101 attgttcata caagcaagag accctttgaa tgtaaggtat gtgggaagtc cttcaagcgc
     2161 gaatccaccc tcattcaaca tggggctgtt catgctggtg tgaaatcata tgagtgcagt
     2221 gagtgtggga aagcctttat tcaccggtca agcctgttgc accatcggaa aattcattct
     2281 gatgagaaac cttttaagtg tcaggagtgt ggaaaggctt tcgttgttct ggcatacctc
     2341 actcggcacc agagcatcca taatggagag aaatcatttg aatgccacca gtgtgggtca
     2401 accttcaaat acaaatccca gctcaataaa catcagagaa gtcatactga tgtgaaactc
     2461 tttcagtgca tggaaggtgg aaatgacttt gttcctggaa tagaccttag aattaatcag
     2521 ggagtctgta ctggtgagag tccctttcaa tgcaatgaat atggggaaca ctttcaacat
     2581 cacaaccaat tttcttggac atactagaat tcatactggt aggaaaccct atcactgtaa
     2641 agaatgtgga aagaacttca atttgaactc aggccttctt taacataaac gaatacatgc
     2701 tggtgtcaaa cactatgaat gcaaggaatg taggaacatt tatagaatta gctcagg
//
