LOCUS       NM_001399374            1761 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 772 (Zfp772), transcript
            variant 1, mRNA.
ACCESSION   NM_001399374 XM_006228178
VERSION     NM_001399374.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 6, 2022 this sequence version replaced XM_006228178.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.1020222.1,
                                           SRR26643294.856.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-253               JAXUCZ010000001.1  75742228-75742480   c
            254-292             JAXUCZ010000001.1  75740076-75740114   c
            293-419             JAXUCZ010000001.1  75738845-75738971   c
            420-506             JAXUCZ010000001.1  75738134-75738220   c
            507-1761            JAXUCZ010000001.1  75735754-75737008   c
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..1761
                     /gene="Zfp772"
                     /gene_synonym="RGD1308782; Zfp978"
                     /note="zinc finger protein 772"
                     /db_xref="GeneID:308318"
                     /db_xref="RGD:1308782"
     exon            1..253
                     /gene="Zfp772"
                     /gene_synonym="RGD1308782; Zfp978"
                     /inference="alignment:Splign:2.1.0"
     CDS             176..1429
                     /gene="Zfp772"
                     /gene_synonym="RGD1308782; Zfp978"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger protein 419; zinc finger protein 978"
                     /codon_start=1
                     /product="zinc finger protein 419 isoform 1"
                     /protein_id="NP_001386303.1"
                     /db_xref="GeneID:308318"
                     /db_xref="RGD:1308782"
                     /translation="MATSQGPASQWSPVVIVEAAGGALPQVSQYSVKPANQEEGCVSF
                     EDVAVYFSWEEWTLLNDSQRLLYQTVMTEILALMSSLGLVPSGIHDITQLESWGEPSV
                     PALRFLTPGCWIKVESESSPIEQSLSAEGGVSLSTLQQQMLCCAETPLLSTDNVTILQ
                     TSSSLLRHQVTYTAGDTPMNTESGEAIQSEKKNCICSDCGKTFTSTSHLNRHRMIHTG
                     EKPFQCSECGMSFSQKAFLIKHFRIHTGEKPFRCGECGKAFKHNISLVSHQRVHTGET
                     PFTCTECGKSYMTRSNLTRHFQVHASEKPYSCSECGKAFKEKSSLIYHARVHTRERPF
                     QCSDCGKSFSQKAFLIKHFRVHTGEKPFRCSECGKAFKHNCFLVAHQRVHTGETPFTC
                     TECGKSYMNRSSLLYHYRVHTGEKP"
     exon            254..292
                     /gene="Zfp772"
                     /gene_synonym="RGD1308782; Zfp978"
                     /inference="alignment:Splign:2.1.0"
     exon            293..419
                     /gene="Zfp772"
                     /gene_synonym="RGD1308782; Zfp978"
                     /inference="alignment:Splign:2.1.0"
     exon            420..506
                     /gene="Zfp772"
                     /gene_synonym="RGD1308782; Zfp978"
                     /inference="alignment:Splign:2.1.0"
     exon            507..1761
                     /gene="Zfp772"
                     /gene_synonym="RGD1308782; Zfp978"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgtgctgga ggttctttga aactttctgg atctgtcagt ctggttcaca gaaaactggt
       61 tttatcagta ttggccatgg caggaaaacc ggagagttga agcgttttcc ctcagtcgga
      121 gacggatctg aggtttgcga caacccgtgt gatctgatct agccttcgag tgaggatggc
      181 cacgtcccag ggccccgcca gccagtggag cccggtggtg attgtggagg ctgccggtgg
      241 agccctgccc caggtttccc agtactcagt gaaacctgcc aaccaggaag agggctgtgt
      301 ttcctttgag gatgtggctg tttacttctc ctgggaggaa tggacactgc tcaatgactc
      361 tcaaaggctt ctgtaccaga cggtgatgac agagatctta gcactcatgt cctctctcgg
      421 acttgtacct tccgggatcc atgacatcac tcagttggag tcttggggag agccctctgt
      481 gcctgcattg agattcctga ctccaggttg ttggatcaaa gtggagagtg agtcgtcccc
      541 tattgagcag agtctgtctg cagaaggagg tgttagttta tccacactgc aacagcaaat
      601 gctgtgctgt gccgagacac ccttgctaag cacggacaat gtgacgatcc ttcagacctc
      661 ctccagtctt ctcaggcatc aagtgactta cactgctggg gacaccccca tgaacactga
      721 gagtggagag gccattcaga gtgagaagaa gaactgcata tgcagtgact gtggcaaaac
      781 ttttactagc acgtcccacc tcaatcggca ccggatgata cacacgggag aaaagccttt
      841 ccagtgcagt gagtgtggga tgtccttcag ccaaaaagcc tttctcatta aacattttag
      901 aattcacaca ggagagaagc ctttcaggtg tggtgagtgt ggcaaagcct tcaagcataa
      961 tatttccctt gtttctcacc agcgagttca cacaggagag acgcccttta cctgcacgga
     1021 atgtgggaaa tcatatatga ccagatccaa ccttacacgt cactttcaag ttcatgcttc
     1081 agaaaagcct tacagttgca gtgaatgtgg caaagcgttt aaggagaaat ccagcctcat
     1141 ttatcatgca cgagtgcaca cccgtgaaag gccttttcag tgcagcgatt gtgggaagtc
     1201 cttcagccaa aaagcctttc tcattaagca tttcagagtt cacactggag agaagccttt
     1261 caggtgcagt gagtgtggca aagcctttaa acacaactgc ttccttgttg ctcatcagcg
     1321 agttcacaca ggagagacac cttttacgtg cactgaatgt ggcaagtcat acatgaacag
     1381 atccagcctt ctatatcatt atcgggttca tactggagaa aagccgtaga agtacagtgt
     1441 ggtggtttga ataggtttgg ccccccatag actcatgtgt ttgaatgctt ggcccatagg
     1501 gaatgacatt cttaggaggt attccttgtt agaataggtg tggccttctt gaaggaagtg
     1561 tgtcactgtg gggatggact ttgtggtccg atgctcaagc tccacccagt tctggagact
     1621 ctcttcctgg ctacctttgg atcaggatgc agaacctctg ctcctctagc accacgtctg
     1681 ccttcacact gctgtgcttc ctgccgtgat gatagtgaac tgaacctgta aaccagcccc
     1741 aaataaatgt cctttctaag a
//
