LOCUS       NM_001401122            3842 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger protein 711 (Zfp711), mRNA.
ACCESSION   NM_001401122 XM_039100221
VERSION     NM_001401122.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3842)
  AUTHORS   Kleine-Kohlbrecher,D., Christensen,J., Vandamme,J., Abarrategui,I.,
            Bak,M., Tommerup,N., Shi,X., Gozani,O., Rappsilber,J., Salcini,A.E.
            and Helin,K.
  TITLE     A functional link between the histone demethylase PHF8 and the
            transcription factor ZNF711 in X-linked mental retardation
  JOURNAL   Mol Cell 38 (2), 165-178 (2010)
   PUBMED   20346720
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Feb 2, 2022 this sequence version replaced XM_039100221.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.59411.1,
                                           SRR26643289.45027.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-172               JAXUCZ010000021.1  81838682-81838853
            173-277             JAXUCZ010000021.1  81842204-81842308
            278-820             JAXUCZ010000021.1  81854455-81854997
            821-976             JAXUCZ010000021.1  81862452-81862607
            977-1114            JAXUCZ010000021.1  81863270-81863407
            1115-1159           JAXUCZ010000021.1  81865968-81866012
            1160-1303           JAXUCZ010000021.1  81868263-81868406
            1304-3842           JAXUCZ010000021.1  81869080-81871618
FEATURES             Location/Qualifiers
     source          1..3842
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq31"
     gene            1..3842
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /note="zinc finger protein 711"
                     /db_xref="GeneID:302327"
                     /db_xref="RGD:1562768"
     exon            1..172
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            173..277
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /inference="alignment:Splign:2.1.0"
     CDS             199..2481
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /codon_start=1
                     /product="zinc finger protein 711"
                     /protein_id="NP_001388051.1"
                     /db_xref="GeneID:302327"
                     /db_xref="RGD:1562768"
                     /translation="MDSGGGSLGLHTSDARMAHTMIMQDFVAGMAGTAHIDGDHIVVS
                     VPEAVLVSDVVTDDGITLDHGLAAEVVHGPDIITETDVVTEGVIVPEAVLEADVAIEE
                     DLEEDDGDHILTSELITETVRVPEQVFVADIVSGPDGHLEHVVQDCVSGVDSPTMVSE
                     EVLVTNSDTETVIQATGGVPGSTVTIKTEDDDDDDVKSTSEDYLMISLDDVGEKLEHM
                     GNTPLKIGSDGSQEDVKEDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESEYTSGHSV
                     AGVLDQSRMQREKMVYMAVKDSSQEEDDINERRVSRRYEDCQATGNTFDSALENRSTT
                     AAQYLQICDSMNTNKVLKQKIKKRRRGETRQWQTAVIIGPDGQPLTVYPCHICTKKFK
                     SRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEY
                     TRRYREASPLSSNKLILRDKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKSFPHVCVE
                     CGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKHGNNLPYKCEHC
                     PQSFGDERELQRHLDLFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCD
                     KGFHRPSELKKHSDIHKGRKIHQCRHCDFKTSDPFILSGHILSVHTKDQSLKCKRCKR
                     GFRQQNELKKHMKTHTGRKIYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKG
                     FRRPSEKNQHIMRHHKETLI"
     exon            278..820
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            821..976
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            977..1114
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            1115..1159
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            1160..1303
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            1304..3842
                     /gene="Zfp711"
                     /gene_synonym="RGD1562768; Znf711"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagacgcag agtagctcgt gattggctcg agctgcggaa cctcggaatc ccgaacgcca
       61 ggaccttcca ggtccacggc tgccgccccc cgcggcagtt gagagcgcgg cctccgactg
      121 actggaggcg gggaaggcgg tgttggctgc agccccgggg cggcggtgac aggtccctgt
      181 gaatgagctt tgctaaggat ggattcaggt ggtggaagtc ttggattgca cacttcagat
      241 gctagaatgg ctcatactat gattatgcag gattttgtgg ctggaatggc tggtactgca
      301 catatcgatg gagaccatat tgtagtttca gttcctgaag ctgtattagt ttctgatgtt
      361 gtcacagatg atgggataac tctcgatcat ggcctggcag ctgaagttgt ccatgggcct
      421 gatattatta cagagactga tgtagtaaca gaaggggtga ttgttcctga agctgtactt
      481 gaagctgatg ttgccattga agaagatttg gaggaagatg atggagatca tatcttgact
      541 tctgagctta ttacagaaac cgttagggta cctgaacagg tttttgtggc tgatattgtt
      601 tctggtcctg atggacattt ggaacatgtg gtccaagatt gtgtttcagg tgttgactct
      661 cccacaatgg tatcagaaga agttcttgta actaattcag atacagaaac tgtgattcaa
      721 gcaactggtg gtgttcctgg ttctactgtt accataaaaa ctgaagatga tgatgatgat
      781 gatgtcaaga gcacttctga agactactta atgatatctt tggatgatgt gggagagaag
      841 ttagagcata tggggaacac accattaaaa attggtagtg atggttcaca agaagatgtt
      901 aaagaagatg gatttggttc agaagtgatt aaagtatata tatttaaagc agaggctgaa
      961 gatgatgttg aaataggtgg gacagaaatt gtcactgaga gtgaatacac cagtggacat
     1021 tctgtagctg gagtgcttga ccagagccga atgcagcgag agaaaatggt ttacatggca
     1081 gtgaaagatt cttcccaaga agaagatgat atcaatgaaa gacgagtttc ccgaagatat
     1141 gaagattgtc aagccacagg aaacactttt gactctgcat tagaaaaccg aagcacgaca
     1201 gcagcgcagt accttcaaat ttgtgatagc atgaacacaa ataaagtact gaaacaaaaa
     1261 atcaagaaga ggcggagggg agaaacaagg cagtggcaaa cagctgttat aataggtcct
     1321 gatggacagc ccttgacagt atacccttgc catatttgca caaaaaagtt taaatccagg
     1381 ggattcttaa aaagacacat gaaaaatcat cccgatcatt tgatgagaaa gaagtatcag
     1441 tgtacagatt gtgactttac aactaacaag aaagtgagtt tccataacca cttagaaagc
     1501 cataagctca taaacaaagt tgataaaacc catgaattta cagaatacac tcgaagatac
     1561 agagaagcta gtcctctgag ttcaaataaa ctcattttaa gagacaagga accgaagatg
     1621 cacaagtgca agtactgtga ttatgaaact gctgaacaag gactgttaaa tagacatttg
     1681 ctggctgttc atagcaagag ttttcctcat gtttgtgttg agtgtggaaa gggttttcgt
     1741 catccttctg aactcaagaa acatatgaga acccataccg gtgagaagcc atatcagtgt
     1801 cagtattgtg tgttcaggtg tgccgatcaa tcaaacctga aaactcacat taaatctaag
     1861 catggtaaca acttgccata taaatgtgag cattgtcctc aatcatttgg tgatgagaga
     1921 gagcttcaac gccatctgga tttgtttcaa ggacataaaa cccaccaatg tcctcattgt
     1981 gatcataaga gcaccaactc aagtgacctt aagcggcaca tcatatctgt ccataccaag
     2041 gactttcctc acaaatgtga agtctgtgat aaaggttttc atcgtccttc agagcttaaa
     2101 aaacatagtg atattcataa aggtaggaag attcatcagt gtaggcactg tgactttaaa
     2161 acatcagatc catttattct tagtggtcat atcctttcgg ttcatactaa ggatcagtca
     2221 ttgaagtgta aaaggtgcaa gagaggattc aggcaacaaa atgagctgaa aaagcacatg
     2281 aagactcata ctggaaggaa gatttaccaa tgtgaatatt gtgaatacag caccacagac
     2341 gcatctggct tcaaacgaca tgtgatttca atacatacga aagactatcc acataggtgt
     2401 gagttctgca agaagggctt ccgaaggcca tcagaaaaaa atcagcatat aatgaggcac
     2461 cacaaggaga ctcttatata gtaagattga tataaagaaa gaaattattt acagaataat
     2521 atatactatt tgggagtaaa atctctgttt tatctggttt caaagcttga tattaaatca
     2581 taaatttaca ctctttgtac taaagatcct aaaatacttg gactaaaagg caatctcaga
     2641 gccctttgaa aattacctaa agattttaag acgtaccata ggatggttac agaggactta
     2701 actgtattta acagtattat atgcataact ctactacaga gggagaaagt taaaacacct
     2761 tatttgattg gtcacactag agataaagtg tttctgaaag gaggatacat aaatgattta
     2821 gaaatgcatt gctatagcaa gcagcctcac ttttatgcaa tttcagaaat agggtgggga
     2881 aagaaaatgc agtcatccat cagtcactta atcattaagc cttttatatt gtacctggac
     2941 attggattcc agaaatggca aatgttttgt gtatttgtta caaggaatct taatctgaaa
     3001 aaacaagtta cattgattca gtcctagtta aaaaagtaaa aaaaaacctt cagagttgtt
     3061 gatattttat cacaggatat gaagcttaag acatagcatt ctgtgctgaa gtgaaatata
     3121 agaaataaaa agttccagtt ttgatgttca agtagattca gtatggtata tatgataaaa
     3181 gtgtatttga gtcaaatgtg gctttctgaa atggatgcaa gtatgttcaa aagtcaatac
     3241 tatgtttctt ataatctaaa tgttaaattg agagaacagt tttcttaaat attaaaatat
     3301 ttagaatttt tagggcagtt ttagtaagta tgactgttca agtcttactt gctataatgt
     3361 ttaaaggtgc aattttatgc cattattgaa aaatttgatt tttaaaatct atataccata
     3421 ttcttaacat aaattttcag tgaggtggta tttatgcagt atttaacaga tcaatatgct
     3481 gctaatagag tttggaggtg ggtgttcagt ttacagtgta taaatttaaa atatgcatcc
     3541 cttaacaacg ctttgtgtta gcatgctgca aatcaaaatg gcgcttaata ttaaaacctg
     3601 gtgtagggaa ttttaatgaa aatcctgttc ataaatgtaa tgcatatgat gtgtactttg
     3661 aagttttagt tgccctaatt tagtttatat tcagctgttc agcataatta atgtgtaatt
     3721 ttacttcatg ctatattgtg actttgtgtt ttaagtaata ttcacctttc tgtttttgca
     3781 ccagataaga atcagttact tgaaaataaa ttttttatct ttcttaactt cagaatatta
     3841 aa
//
