LOCUS       NM_001163063            2600 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 709-like 1 (Zfp709l1), mRNA.
ACCESSION   NM_001163063 XM_001074405 XM_001075139
VERSION     NM_001163063.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Pintchovski,S.A., Peebles,C.L., Kim,H.J., Verdin,E. and
            Finkbeiner,S.
  TITLE     The serum response factor and a putative novel transcription factor
            regulate expression of the immediate-early gene Arc/Arg3.1 in
            neurons
  JOURNAL   J Neurosci 29 (5), 1525-1537 (2009)
   PUBMED   19193899
  REMARK    GeneRIF: Arg3.1 in neurons is the first target of serum response
            factor and functions at synapses to mediate neuronal plasticity.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.945236.1,
                                           SRR23984936.881170.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840115 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                JAXUCZ010000007.1  8358716-8358803     c
            89-215              JAXUCZ010000007.1  8352952-8353078     c
            216-276             JAXUCZ010000007.1  8342396-8342456     c
            277-2600            JAXUCZ010000007.1  8339672-8341995     c
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..2600
                     /gene="Zfp709l1"
                     /note="zinc finger protein 709-like 1"
                     /db_xref="GeneID:690419"
                     /db_xref="RGD:1596088"
     exon            1..88
                     /gene="Zfp709l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..1582
                     /gene="Zfp709l1"
                     /note="zinc finger protein 433-like"
                     /codon_start=1
                     /product="zinc finger protein 878"
                     /protein_id="NP_001156535.1"
                     /db_xref="GeneID:690419"
                     /db_xref="RGD:1596088"
                     /translation="MAAVTYEDVHVNFTHEEWALLDPFQKSLYKDVMLETYWNLTAIG
                     YKLEDLNSEEHSPRSRRYERHNICHSGYKPCERKGYGKKQCTFASKRFLQIYESIHTE
                     GNPYECKQCSQIFANLYHLQKHEKKHTREKLYECNHCGKAFPSRNSLQIHNRTHTGEK
                     PYDCNQCGKAFTCSSNLLLHKRTHTGEKPYDCNDCGKAFASSSNLQIHKRKHTGEKPY
                     GCNQCGKAFAYSNALQKHERSHTREKIYECNHCGKAFARRRSLQNHEEHHTLEKPYEC
                     SQCGKAFAYSSNLYIHERSHTGEKPFKCPQCGKAFPSHSSLQIHERTHTGEKPYDCNE
                     CGKAFACRSNLLLHKRTHTGEKPYHCIKCDKAFACSSSLQKHEKTHTGEKPYKCNQCG
                     KAFARRSDLYIHVRIHTGEKPYKCSQCGKAFVHCISLQRHERTHTGEKPYECNQCGKA
                     FTRRFSLQVHERSHSGEKPYECNQCGKAFASRSSLRYHRKHHTVKKPN"
     exon            89..215
                     /gene="Zfp709l1"
                     /inference="alignment:Splign:2.1.0"
     exon            216..276
                     /gene="Zfp709l1"
                     /inference="alignment:Splign:2.1.0"
     exon            277..2600
                     /gene="Zfp709l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaagtctctc ctcggtccgt gctctgggct gggaccctgc ttcccacagc tgtgagaaga
       61 gcggggtgag gtcagaatcc gcgctatggc tgcagtgacc tatgaggatg tgcacgtgaa
      121 cttcacccat gaagagtggg ctttgctgga tcctttccaa aagagtctct acaaagatgt
      181 gatgctggag acctactgga acctcactgc tataggatac aaattggaag acctgaatag
      241 tgaggaacac tctccacgct ctagaagata tgaaagacat aatatctgtc actctgggta
      301 taaaccttgt gaacgtaaag gatatggaaa gaagcaatgt acctttgcaa gtaaaagatt
      361 tcttcaaata tatgaaagca tccatactga agggaatccg tatgaatgta aacaatgcag
      421 tcaaatcttt gcaaatttat atcatcttca aaaacatgaa aaaaaacata ccagagaaaa
      481 actatatgaa tgtaatcact gtggtaaagc ctttccaagt cgcaattctc ttcaaataca
      541 caacagaact catacaggag agaaacccta tgattgcaac caatgtggta aagcatttac
      601 atgtagcagt aatcttttac tacacaaaag aactcataca ggagagaaac cctatgattg
      661 taatgactgt ggtaaagcat ttgcaagtag cagtaatctt caaattcata aaagaaagca
      721 cactggagag aaaccctatg gatgtaatca gtgtggtaaa gcctttgcat atagcaatgc
      781 tcttcaaaaa catgaaagaa gtcatactag agagaaaatc tatgagtgta atcattgtgg
      841 taaagctttt gcacgtcgta gaagtcttca aaatcatgaa gaacatcata ctcttgaaaa
      901 accatatgaa tgtagtcaat gtggtaaagc ctttgcatat agcagtaatc tttatataca
      961 tgaaagaagt catactggag aaaagccatt caaatgtcct caatgtggta aagcctttcc
     1021 aagtcacagt tctcttcaaa tacatgaaag aactcataca ggagaaaaac cctatgactg
     1081 taatgaatgt ggtaaagcat tcgcatgtcg cagtaatctt ctactacaca aaagaactca
     1141 tacaggagaa aaaccctatc attgcattaa atgtgataaa gcatttgcat gtagcagtag
     1201 tcttcaaaaa catgaaaaaa ctcacactgg agagaaacct tataaatgta atcagtgtgg
     1261 taaagccttt gcacgtcgaa gcgatctgta tatacatgta agaatccata ctggagagaa
     1321 accatataag tgtagtcaat gtggaaaagc atttgtacat tgcattagtc ttcagaggca
     1381 tgaacgaact cacactggag agaaacctta tgagtgtaat caatgtggta aagcctttac
     1441 acgtcgcttt agtcttcaag tacatgaaag aagtcatagt ggagagaaac cttatgagtg
     1501 taatcagtgt ggtaaagcct ttgcaagtcg tagtagtctt cgatatcata gaaaacacca
     1561 tactgttaag aaaccaaatt aaccagtgtg gtaaagcctg ttggaatcac cttcaaacac
     1621 atgaaagaaa tcatactgga tagaaactat gcgtatagtc aatgtggaca agcctttata
     1681 tatcacagta gtcttctaaa tcacaaaacc aatgtcatat ggagagaaac cctacaaatg
     1741 taattgatgc agtaagcttt ggcatgtaag tataatattc agacatatca aaaaactcat
     1801 actggagaga aaccttgtga atgtggtcaa gtgataatgc ctctgcatgt tatggtcttc
     1861 aaaggcatga gagaattcct actggttaga aacaccctga atccaataaa tgcagtaagc
     1921 cttatgcaca catttttccc actgagtgat gtcacaggga atcatataag attagtggaa
     1981 tcattttatc atcaaaatat cgtcttgttt acaaattgtc atccaagaat agaggaacac
     2041 agaataattt gaacaataaa acttgcaaat gaaaatgata ataatactgc catcattttt
     2101 atgggtcact ttattctgag aaatactact tgctcttaac agtttctcag aagcacaaat
     2161 gcgtgacaga taagtgtctc agtgacttaa ggtggttgct gctaagctaa tgacctgagt
     2221 ttatatgtaa tgtggaaact cacattactc atgcaagttt ttctgatttt tacagttggg
     2281 ctgtgtcata tgcacacaca cataatggca catatattca aaaatatttt tgacagtaag
     2341 taatggccaa tgatttcact cagcagttga aggcacttgt tgcaaaactg gactacctgt
     2401 gtttgattgc tacaactctg ctagaggaaa tagggaatag atatctgtaa gttgtcttct
     2461 gacttgcaca tgcacaacat agcaccagtg tatatacaca gataaaaatt attataggtg
     2521 aaaataaaga aaataaccaa agtattgaga atacaaatga tttaccagtc ataataaaag
     2581 cattctagta ttccaagaaa
//
