LOCUS       NP_001387994             670 aa            linear   ROD 31-MAR-2024
DEFINITION  zinc finger protein 7 [Rattus norvegicus].
ACCESSION   NP_001387994 XP_003750417
VERSION     NP_001387994.1
DBSOURCE    REFSEQ: accession NM_001401065.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 670)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Feb 1, 2022 this sequence version replaced XP_003750417.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.159511.1,
                                           SRR26360190.17709.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     Protein         1..670
                     /product="zinc finger protein 7"
                     /calculated_mol_wt=76858
     Region          4..64
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          231..620
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          236..256
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(236,239,252,256)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          264..284
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(264,267,280,284)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          292..312
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(292,295,308,312)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(297,299,301,303..304,307..308,311,325,327,331..332,
                     335..336,339,353,355,357,359..360,363..364,367)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          320..340
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          348..368
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          399..419
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(399,402,415,419)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          427..447
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(427,430,443,447)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(432,434,436,438..439,442..443,446,460,462,466..467,
                     470..471,474,488,490,492,494..495,498..499,502)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          455..475
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          483..503
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          511..531
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          539..559
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          567..587
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          620..640
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          632..657
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          648..668
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..670
                     /gene="Zfp7"
                     /gene_synonym="Znf7"
                     /coded_by="NM_001401065.1:88..2100"
                     /db_xref="GeneID:315101"
                     /db_xref="RGD:1310636"
ORIGIN      
        1 metvtfgdva vhfsreewqc ldsgqralyr evmlenhssv aglagflvfk pelisrleqg
       61 qepwaldlqg aegteapric qtdsntrtdc rqtceytnll krqipdfggn ldskvwsenc
      121 prslglrvsg slfqehhlkn etmmpknftk davkeckelq atdlgyqpdd lrdhvkgtse
      181 ncevcgrvvr pvlnldpyem ngqerpyrcq ecqetssdck qekhtgdchg kkpygceecg
      241 kvfrlcsqln qhqrihtgek pfkcvdcgkg frlsskliqh qrihtgekpy rceecgktfg
      301 qssslihhqr ihtgerpysc qecgksfsqq sqlvrhqrth tgerpypcqe cgkafsqsst
      361 laqhqrmhtg eksqmprasg spsllarqrn ntvekpfkce ecgkafrwis rlnqhqliht
      421 gekpykcnkc tkafgcssrl irhqrthtge kpfkceecgk gfvqgshliq hqrihtgekp
      481 yvcddcgkaf sqsssliyhq rihkgekpye ciqcgkafsm stqltshqri htgerpykcs
      541 ecgkafsqns tlfqhqiiha gvkpyecsec gkafsrssyl iehqrihtra qwyyefgntt
      601 esstflnhkk vnpvkklhqc ddcdkifrwr shlvihqrih tgekpyrcna cgkafnrssr
      661 ltqhqkihmr
//
