LOCUS       NM_001401770            1625 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 688 (Zfp688), transcript
            variant 1, mRNA.
ACCESSION   NM_001401770 XM_006230372
VERSION     NM_001401770.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 24, 2022 this sequence version replaced XM_006230372.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887622.1056150.1,
                                           SRR26643288.4503.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-254               JAXUCZ010000001.1  191473274-191473527 c
            255-368             JAXUCZ010000001.1  191472867-191472980 c
            369-1625            JAXUCZ010000001.1  191469858-191471114 c
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q37"
     gene            1..1625
                     /gene="Zfp688"
                     /gene_synonym="RGD1310765; Znf688"
                     /note="zinc finger protein 688"
                     /db_xref="GeneID:102554302"
                     /db_xref="RGD:1310765"
     exon            1..254
                     /gene="Zfp688"
                     /gene_synonym="RGD1310765; Znf688"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..886
                     /gene="Zfp688"
                     /gene_synonym="RGD1310765; Znf688"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger protein 688-like"
                     /codon_start=1
                     /product="zinc finger protein 688 isoform 1"
                     /protein_id="NP_001388699.1"
                     /db_xref="GeneID:102554302"
                     /db_xref="RGD:1310765"
                     /translation="MSPPPAPLLVPMPGEIWPGFRKPELVSFADVAVYFSPQEWGCLR
                     PAQRALYREVMRETYGLLGALGFPGPKPALISWMEQESEAWSPAAQDPEEGESLGGAP
                     RGDTPNEGARGCKEGGERPADIPAQLQPKEVDKHKTHPMATKASAGARPPTKAAPDQI
                     AAGVQPPAQVPNTDIQPSQRRHVCVDCGRRFTYPSLLISHRRMHSGERPFPCPECGVR
                     FKRKFAVKAHQWIHRSCSGGRRGRRPGIRAVPGAPVRGDRDPPVLFRHYPDIFEECG"
     exon            255..368
                     /gene="Zfp688"
                     /gene_synonym="RGD1310765; Znf688"
                     /inference="alignment:Splign:2.1.0"
     exon            369..1625
                     /gene="Zfp688"
                     /gene_synonym="RGD1310765; Znf688"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagaggccg gaagcggaag gctggggcag ccaagccgct gcccgggcag gatccctgat
       61 gtcgccaccc ccagccccac tactggttcc gatgcctggg gagatctggc ctggtttcag
      121 gaagcctgag cttgtgagct tcgcggacgt agccgtgtat ttctccccgc aggagtgggg
      181 gtgtctgcgg cccgcgcaga gagccctgta ccgggaggtg atgcgcgaga cctacggcct
      241 cctgggcgcg ctcgggttcc cgggccccaa accagccctc atctcttgga tggaacagga
      301 gagtgaggct tggagccccg ccgcccagga tcctgaggag ggggaaagcc tgggaggagc
      361 tccgagagga gatactccaa atgagggagc acggggctgc aaggaaggag gtgagaggcc
      421 ggcagacatt cctgctcagc tgcaacctaa agaggtggat aaacacaaga ctcatcccat
      481 ggctaccaag gcctctgcag gggcgcggcc acctaccaaa gctgccccag accagatagc
      541 agcaggcgta caacctcctg ctcaggtacc caacacagat atacagccca gccagcgacg
      601 ccatgtgtgt gtggactgtg gacgccggtt tacctacccg tctttactga tcagccaccg
      661 tcgcatgcac tctggtgagc gacccttccc ctgtccagaa tgtggtgttc gcttcaagag
      721 gaagttcgca gtgaaagcac atcaatggat ccaccgttcc tgctcagggg gtcgccgagg
      781 ccgaaggcct gggatccggg ctgtgcctgg agccccagtc cgaggagacc gggatccacc
      841 agtgctcttt cggcactatc cagacatctt tgaggagtgt gggtgagttc aacagctgcc
      901 ttcgtctgga ggtctggagc ggagcgtgaa cttggcactg agagtcaact gagtcaagac
      961 ttgggaattg aaatacacct gtttgacttc tcaaggattg cttgtaaaat tgtgaaaaga
     1021 aaatttcctg taaaaatccc tacagattaa acctgacacc tgcccaaccc ccagtgtttt
     1081 gtgtttaaaa aaatggggtc tgggctagag atgtgagttg gttcagtgct gttttagtca
     1141 gggtcacaag aggaacagaa cagaatggat gaacttgcac actcacatat atggtataga
     1201 ataggtaaaa ggcaaagaaa aaggcaagag gaggagctaa ctttgaaatt gccttttgat
     1261 cctgattcct tccagaaggg gctgccctac aacaaggggc cctgtaaagg taacttttat
     1321 tcccttgtag taactgtcgg ttggaggctt cagcctctgt ctgctagcct aggcctcgtc
     1381 ctgaaagctt ctaccctctg tacagtctaa tccaggccta gaatgttttc agcctctgag
     1441 acttgttgct gagtaagctc acccttccta gtgctttctg agcactggcc gattcaactc
     1501 agctgttctg ccccaaactc cttttcaagc tgactgttga agttaggtcc ttgtcctgtc
     1561 tccgagctcc gtgttcccag aaataagact cagactcaaa ttaaatttat aaataccttg
     1621 gtcac
//
