LOCUS       XM_002729549            2387 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 683 (Zfp683),
            mRNA.
ACCESSION   XM_002729549
VERSION     XM_002729549.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002729549.6.
            
            On Jan 21, 2021 this sequence version replaced XM_002729549.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2387
                     /gene="Zfp683"
                     /note="zinc finger protein 683; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 2 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100359438"
                     /db_xref="RGD:2323855"
     CDS             110..1540
                     /gene="Zfp683"
                     /codon_start=1
                     /product="tissue-resident T-cell transcription regulator
                     protein ZNF683"
                     /protein_id="XP_002729595.3"
                     /db_xref="GeneID:100359438"
                     /db_xref="RGD:2323855"
                     /translation="MKAKPATQLGCCYKRKALDGLGGSLFSSLDFRHYQDDQVCSADT
                     SQPLPDTMDARDLPWSERMCPLPLAPAKSSLLACPEGLDLRLCALQKTPLGRASQDLG
                     EDASNTRQQPPSLYKASTDIEKLTTKDPRNREEMGNQPERGAHPALPPHTSSFPEAGL
                     DRKSLSPLTFWPWLPPTFISKETPIHIYPIFPGYPLWPLPYLFTYGTQPSAQCPYLFM
                     LPPDSTYPTTTGAGLFMTANGPGPHTPQEKTLLLYSGAFQSAGHTLYSQVGSRSSRDA
                     LTPGQAGVTAPARQAVPGSRAGVIALPYPLKKENGKILYECNVCGKNFGQLSNLKVHL
                     RVHSGERPFQCALCQKRFTQLAHLQKHHLVHTGERPHQCQVCHKRFSSPSNLKTHLRL
                     HSGARPFQCSICPSHLTRNVYPKLHPRLQAPQLHGLTHTHLPLASLTCLSQWHQGALD
                     LVEERKTGWDVDKVSSVSKGRQGQTA"
ORIGIN      
        1 cgctgcctgc ctgcacgacc tctttccttt ccaaccagag agggctgctg cagaacccat
       61 tgaagagccc acaaggccag ctggtactcc agactacggt agtgggacca tgaaggcaaa
      121 accagctacc cagttgggtt gttgctacaa gaggaaagcc ctggatggtt taggaggctc
      181 cctgttctcc agcctggact tccggcacta tcaagatgac caggtctgct cagctgacac
      241 ttctcagcca ctcccagaca caatggatgc tcgtgactta ccctggagtg agaggatgtg
      301 ccccttacca ctggcaccgg ctaagtcctc cttgctggcc tgtcctgaag gcctggacct
      361 acgcctgtgt gccctgcaga agacaccgct aggcagagcc tcgcaggatc tcggagagga
      421 tgcctcaaac actagacagc agccaccaag cctgtacaaa gcatctacgg acatcgagaa
      481 actcacaacc aaggacccgc ggaacagaga agagatggga aaccagccag aaagaggcgc
      541 ccacccagcc cttcctcctc ataccagctc cttcccagag gctgggctgg acagaaagag
      601 ccttagtccc ttgaccttct ggccctggct tcctcccact ttcatctcca aggaaacccc
      661 catccacatc taccccatct tccctgggta cccactttgg cctctccctt acctattcac
      721 ttatgggacc caaccttctg cccagtgtcc gtacctcttc atgctgccac cggactccac
      781 ataccccacc acgactgggg ctggcttgtt tatgacagct aatggacctg gaccccatac
      841 cccccaagag aagaccctgc ttctctactc aggagctttc cagagtgctg gccacaccct
      901 atactcccag gtcgggagtc ggagctctag agatgccttg accccaggac aagctggtgt
      961 gacagctcct gcaaggcagg ctgtgccagg ctcccgggca ggtgtcatag ccctgcccta
     1021 ccctctgaag aaagagaatg gtaaaatctt atacgagtgt aacgtgtgtg gcaagaactt
     1081 tgggcagctg tccaacctga aggttcacct gcgtgtgcac agtggggagc gcccgttcca
     1141 gtgtgccctg tgtcagaagc gcttcaccca gctggcccac ctgcaaaagc accacctggt
     1201 gcacaccggg gagcggcccc accagtgcca ggtgtgccac aagcgattca gcagtcccag
     1261 caacctcaag acccaccttc gcctgcactc aggtgccagg cccttccaat gcagcatctg
     1321 tcccagtcac ctcacccgga atgtctaccc taagctgcac cctaggctgc aggctcctca
     1381 gctccatggc ctgacccaca cccacctgcc cctcgcctct ctcacctgcc tttcccagtg
     1441 gcaccaagga gcactagatc ttgtggaaga gaggaagaca ggctgggatg tggacaaggt
     1501 gtcctcagta tccaagggaa ggcagggaca gacagcttga gcgggatttc tctgggagca
     1561 gagtgttggc aattaaaaga tggtctccgg gttggggatt tagctcagtg gtagagcgct
     1621 tgcctagcaa gcacaaggcc ctgggttcag tcctcagctc cgggaaaaaa aaaaaaaaaa
     1681 agatggtctc agtgctgagt caaggcctcc tgagtgtctc cagtggaggg gaatgtccct
     1741 gccagatcta acccctcact tgggaatggc aggatacaca gtctgtctgg ggatgggtcc
     1801 atgcagccat ctgcctcagg ctgggtttgg gttcctctct cttgcctgtg atctacctgg
     1861 gcctgagctc tccatctcaa ctcaccaagg gacagtgcta cctctcggga ctggatgaag
     1921 gcagagtgtg ctccaggggg aggagggaca ccggaggcag gaggacctca gcggtgacat
     1981 tattgtcagc tgctttagtt acctggtctg atgaacaaag catcttgaag taactggaga
     2041 atgaagcaag aacggatttg tgcattggcc aatcgcagga catgttgcag tccttcctga
     2101 acacctttcc caacatctcc gattgtcccc tgggttcctg cctaccactt tctaacttca
     2161 gttccttctc agctcaggta gaggtcagct gggattactt gccatgatgg agtgggatgt
     2221 aagtctcccc ccccgcatgg gggtgaaaaa agagacataa gatattcccc tgtctgggct
     2281 ggagagatgg cttagtggtt agagcactga ctgctcttcc agaggtcctg agttcaattc
     2341 ccaataacca catggtggct cacaaccatc tgtaatggga cttgatg
//
