LOCUS       NM_001420023            3280 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 658 (Zfp658), mRNA.
ACCESSION   NM_001420023 XM_039100906
VERSION     NM_001420023.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3280)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3280)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Apr 24, 2023 this sequence version replaced XM_039100906.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN13663593,
                              SAMN13663594 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                JAXUCZ010000001.1  103129089-103129186
            99-236              JAXUCZ010000001.1  103131206-103131343
            237-470             JAXUCZ010000001.1  103131903-103132136
            471-597             JAXUCZ010000001.1  103134491-103134617
            598-699             JAXUCZ010000001.1  103134973-103135074
            700-3280            JAXUCZ010000001.1  103139671-103142251
FEATURES             Location/Qualifiers
     source          1..3280
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..3280
                     /gene="Zfp658"
                     /note="zinc finger protein 658"
                     /db_xref="GeneID:102546648"
                     /db_xref="RGD:7541917"
     exon            1..98
                     /gene="Zfp658"
                     /inference="alignment:Splign:2.1.0"
     exon            99..236
                     /gene="Zfp658"
                     /inference="alignment:Splign:2.1.0"
     exon            237..470
                     /gene="Zfp658"
                     /inference="alignment:Splign:2.1.0"
     CDS             411..3062
                     /gene="Zfp658"
                     /note="zinc finger protein 658-like; zinc finger protein
                     175-like"
                     /codon_start=1
                     /product="uncharacterized protein LOC102546648"
                     /protein_id="NP_001406952.1"
                     /db_xref="GeneID:102546648"
                     /db_xref="RGD:7541917"
                     /translation="MNLSQKPQRVHPQEQDGSCERLVSFEDVTVDFSQEEWRRLDPAQ
                     RRLYQEVMLEIYSHLLSVGYPIPSPGAIFRIKKRKKTQTGEAKFPHHQCWCQEVESEF
                     YTPRQKASENAAFQTRKASALSGHGLWCSILEVLWQDPDLTKRDGQSQIPPWSPGAFL
                     NKKTQNTDRDCGCKEPGKTTPLVSNLISTQKGAPKSLAKHLKRNLEANGEEQGNVTKQ
                     LNDIVTLGRLCTQDTNCTVPHEGPCEGDQCRKVPIHKQPLAEKEVHSHEKPDEGTGRG
                     RTDDASAFCQHQTAHTGEGPLVCHKCEEVFLQKTEFASHQETHPEKPYECPDCGKSFS
                     RTSNLQVHHRIHTGEKPYECRDCGKSFNNTSQLKVHYRIHTGERPYVCPVCGKAFKQK
                     SILSTHETIHTGEKPYKCTVCGKLFSCTSRLKVHYQIHMKEKPYECGDCGKAFKRKSS
                     LTVHQKIHSRQTRHACSECGKEFSQKSELSTHQRLHLGKNSHKCADCGKAFTYASQLK
                     MHHRVHTGEKPYKCRDCGKSFTYSFTLNVHRRIHKVEKPHKCSVCGKALASKYQLEEH
                     ERIHTGEKPYVCTECGKGFHGRSGFLRHQITHTRDKPFVCHKCGKAFFQRSQLTSHQQ
                     THTGEKPYPCRYCGKSFSHTSQLTVHHRIHTGERPYKCNYCGKSFSNSSQLKEHLRIH
                     TGETPYACSECGKAFSRRSSLNLHTKIHTGEKHHICSECGKAFSQKSVLRTHQRIHTG
                     EKPYKCGDCGKALASKGQLRDHQRIHTGEKPYVCPECGKGFFGRSSLHRHQMTHTKER
                     PFVCQKCGKTFIQKSALTSHQQIHTGEKPYVCPECGKGFYNKSSLPRHQMTHTKGRSF
                     VCQKCGKAFLQKSVLKCHQRTHTCKKP"
     exon            471..597
                     /gene="Zfp658"
                     /inference="alignment:Splign:2.1.0"
     exon            598..699
                     /gene="Zfp658"
                     /inference="alignment:Splign:2.1.0"
     exon            700..3280
                     /gene="Zfp658"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccctgcgcg agagtttgga ttctaacact gagagccggt gggcggaagt cgcaggggcc
       61 ctgcgtgtcc tgtgcagagt tctgcggtgc ggtgagaggt tctgagggtg ccccgagctt
      121 cgcatcactg tagatcctca gtgcccatga cacacacggc accctcaccg tggaaaggaa
      181 acaacttaag ttaattcctc atcttctcac aagtcaaagg tacagcagct gtggtgacct
      241 cagtcaggcc acatcatcca ggctgtggga tttttttttt ttacctcaac acagatggcc
      301 tgtctgctca gctgctctcc tggtaacctc tagaccctca ctcagctttc ggttcctgag
      361 aaaattggat ctgccagcaa agaggcaaga gaggaaacat acctgttgac atgaatttgt
      421 cccagaagcc ccagagggtg cacccacagg agcaggatgg gtcatgtgag agattggtgt
      481 cctttgagga tgtgactgtg gactttagcc aggaggagtg gcggcgcctg gaccctgccc
      541 agagacgcct gtaccaggag gtgatgctgg agatctacag ccacctcttg tcagtgggct
      601 accctattcc cagccctggg gccatcttca ggataaagaa aagaaagaag acacagacag
      661 gagaggctaa gttcccacat catcagtgtt ggtgtcaaga agtggaatca gagttttaca
      721 ctccccgaca gaaagcttcc gagaatgcag catttcaaac cagaaaggcg agtgcactct
      781 caggtcatgg tttgtggtgc tctattttag aagtactgtg gcaagacccc gaccttacaa
      841 aaagagatgg acaaagccag atcccaccct ggagtcctgg tgctttcctc aacaagaaaa
      901 cacagaacac agacagagac tgtggttgta aagagcccgg aaaaaccacc cccttggtat
      961 ctaaccttat ttctacacaa aagggagctc caaagtcact tgcgaaacat ttgaagcgca
     1021 accttgaagc aaatggtgaa gaacaaggca acgtcacaaa gcagcttaat gacattgtta
     1081 cgttgggtcg actctgcacg caagacacta actgtacagt tcctcacgaa gggccgtgcg
     1141 aaggtgacca gtgcagaaaa gttcccatcc acaaacaacc acttgcagag aaagaagtcc
     1201 attctcacga gaagccagat gaaggcacgg gacgtggaag gaccgacgat gcgtctgctt
     1261 tctgtcaaca tcagacagct cacaccggag aaggacctct tgtctgtcac aagtgtgagg
     1321 aagtcttcct ccagaagaca gagtttgcct cccatcaaga aactcaccca gagaaacctt
     1381 atgagtgtcc cgactgtggg aaatcattta gccgaacatc caacctgcag gtccatcatc
     1441 gaattcacac tggagagaaa ccttacgaat gccgggactg tggcaaatca ttcaacaaca
     1501 cttcccagct gaaggtacat tatcgaatac acacagggga gagaccttac gtgtgtcccg
     1561 tgtgtgggaa ggccttcaag cagaaatcaa tcctcagcac ccatgagacg attcacactg
     1621 gggagaagcc ttacaaatgt accgtttgtg ggaaactgtt cagctgtacg tcccgactga
     1681 aggtgcatta tcagattcat atgaaggaga agccttacga atgtggtgac tgcgggaagg
     1741 ccttcaagcg aaagtcaagc ctcaccgttc accagaagat ccacagcaga caaacacgcc
     1801 atgcgtgcag cgagtgcggg aaagagttca gccagaagtc agagctcagc acgcaccaga
     1861 gacttcacct ggggaagaat tctcacaaat gcgccgactg cgggaaggcg tttacttacg
     1921 catcccaact gaagatgcac catcgagttc acacggggga gaagccctac aagtgccggg
     1981 actgtggcaa gtcctttacg tactcattca ccctgaatgt gcatcgccgg attcacaagg
     2041 tggagaagcc tcacaagtgc agcgtctgcg ggaaagcctt ggcttctaag taccagctgg
     2101 aagaacatga gcggatccac acaggggaga agccttacgt atgtactgaa tgtggaaaag
     2161 gcttccatgg taggtcaggt ttcctacggc atcagataac tcacactagg gataaacctt
     2221 ttgtctgtca taaatgtggg aaggccttct ttcagaggtc acagttgaca tctcatcagc
     2281 aaactcacac gggagagaag ccatatccgt gtcgttactg tgggaaatca ttcagccaca
     2341 catcccagct gacagtccat catcgaatcc acactgggga gagaccttac aaatgcaact
     2401 actgtgggaa gtcgttcagt aattcctccc aactgaaaga gcatctacga attcatactg
     2461 gggagacacc ttacgcatgt tccgaatgtg ggaaggcctt cagccgaaga tcatccctca
     2521 atttacacac gaaaattcac actggagaaa aacaccatat ttgtagcgag tgtgggaaag
     2581 ccttcagtca gaagtcagta ctgcgaacac atcagagaat acacactggg gaaaagcctt
     2641 acaaatgcgg tgactgtggg aaagccctag cttcaaaggg ccagcttcga gatcatcagc
     2701 ggattcacac gggcgagaag ccctatgtgt gccccgaatg tgggaagggc ttcttcggca
     2761 ggtcgtcttt gcacagacat cagatgactc acactaagga gagacctttt gtctgtcaaa
     2821 aatgtgggaa gaccttcatc cagaagtcag cactgacatc ccatcagcaa attcacacag
     2881 gcgagaaacc ctacgtgtgc cccgagtgtg ggaagggctt ctacaataag tcgtctttac
     2941 ctcgacatca gatgactcac acgaagggga gatcttttgt ctgtcaaaaa tgtgggaagg
     3001 ccttcctcca gaagtctgtg ttgaaatgcc atcagcggac ccacacttgc aagaagcctt
     3061 aggaaagcca taggaaattg tcccataata taacccaccc tagacccatc gtcattccta
     3121 cacaggaatg tagaggggat gagaactcgc cctgcagtgc atcccaactg gaggtgcagc
     3181 actggattta gactgtgttc tgatactact gtgttctgag tgttgaaagg cttttaacag
     3241 tgtgtcagat tataataaat gccaagcacc tcataccaga
//
