LOCUS       XM_237855               6612 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 654 (Zfp654),
            transcript variant X1, mRNA.
ACCESSION   XM_237855
VERSION     XM_237855.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_237855.11.
            
            On Jan 21, 2021 this sequence version replaced XM_237855.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6612
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6612
                     /gene="Zfp654"
                     /note="zinc finger protein 654; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 32
                     ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 133 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:288354"
                     /db_xref="RGD:1308321"
     CDS             302..3658
                     /gene="Zfp654"
                     /codon_start=1
                     /product="zinc finger protein 654 isoform X1"
                     /protein_id="XP_237855.6"
                     /db_xref="GeneID:288354"
                     /db_xref="RGD:1308321"
                     /translation="MAEEESDQEAERLGEELVAIVESPPGPVGLRAAGDGRGGASGSG
                     SGGGVGISSRDYCRRFCQVVEDYAGRWQVPLPQLQVLQTALCCFTSASTSFPDECEHV
                     QYVLSSLAVSFFELLLFFGRDEFYEEPLKDILGSFQECQNHLRRYGNVNLELVTRIIK
                     DGGPWEDPVLQAVLKAQPASQEIVNKYLSSENPLFFELRARYLIACERIPEAMALIKS
                     CINHPEISKDLYFHQALFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTLL
                     ALQLCESFLIPQLQNGDMYYIWELIFIWSKLQLKSNPSKQVFVDQCYQLLRTATNVRV
                     IFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPETKCLIYKTIAHFLPNDLEIVR
                     VCALSVFFLERSLDAYQTVEELYRRPDEEYSEGTSTVQNRVRFELLPILKKGLFFDPE
                     FWNFVMIKKNCVALLRDKSAMKLINENTLENSAGSLKNRVEQQSVEDGLDTLTDLSTG
                     ETDPDGTSVMQRKGQVNSKRSLSVLNTSKVDHSVPRHRCMLCNKEFLGGHIVRHAQAH
                     QKKGSFSCVICGRKFRNRGLMQKHLKNHVKKIQRQQIATAQQDDPEIITLEEINGSKS
                     SISFENGNSNTKSLEIETLTASSERNKEVTREHMAEFIKIPIAMPENAMENIVENGRP
                     DTSFNNISESLSQCDDDYEEEENEDNYEDDYDLNQETSVLHKINGTVCHPKDVYATDQ
                     EGNFKCPALGCVRIFKRIGFLNMHARTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQ
                     HFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDL
                     PLLYEHEAQHYLSKTPESSAQLGEVVPNHQNIDPFSNENQTIHQPVSTSKSRKDSTEP
                     KTCIDTMEKKTDSLVQNGNEHSDDSVSNISLIDQKMPAIEPNPENNHSPTDLVNGHSE
                     IEQMPLVTSDATLKIDINRNGTENGSVIPNVISQEHSALSVSQAPSKPNLTSEHTSYG
                     LILTKPFVRPLPPSYLDERYLSMPKRRKFLTDIVDACSDQDNMYKKPVKRLRCGKCLT
                     TYCNAEALEAHLAQKKCQTLFGFDSDDESA"
ORIGIN      
        1 gtcctcagca accgccgagt agtgttgacc aacagatggc agggctgtca aacagacggt
       61 tagtttaacc aataggagtg tagggcgggc atgcctatga ttggcggttt ccttcttcca
      121 gtgaaaactg ggggcgtggg tgggcggagc cggaagtaga gcccagtgga gtggccctgt
      181 ccggctcggg cggagggaaa ggaggaggga actagaggag gaggaggagg ttagctgagg
      241 cagcggcggc ggcagcggcg gcggcgcagg ggctgggtac gcgctgggcg gcgagagcct
      301 catggcggag gaagagagcg accaagaggc cgaacgcctc ggagaagagc tcgtggccat
      361 tgtggagtcc cccccgggcc cagtggggct cagagctgcc ggcgacggca gagggggagc
      421 cagcggcagc ggctctggcg gcggcgtcgg gatcagcagc cgggattact gccgacgctt
      481 ctgtcaggta gttgaagatt atgctgggcg ttggcaggtc ccgttgccac agcttcaggt
      541 tcttcagact gcactgtgct gtttcacgtc agccagcaca tcgttcccag atgagtgtga
      601 gcacgtgcag tatgttttga gtagtctggc tgtgagtttc tttgagttgc tcctgttctt
      661 tggaagagat gagttttatg aagaaccctt aaaggatatt cttggctcat ttcaggaatg
      721 ccagaatcac ctccgcagat atggaaatgt gaatctggaa ctggtgactc gaatcattaa
      781 agatggtggt ccatgggaag atccagtgtt gcaagctgtt cttaaagcac aaccagcatc
      841 tcaggagata gtgaacaaat acttaagttc tgaaaatcca ctgttctttg aactacgtgc
      901 cagatatcta attgcctgtg aacgcatacc tgaagcaatg gctcttatta aatcttgtat
      961 aaatcaccct gaaatcagta aagacttgta cttccatcaa gcgctcttca cctgtctgtt
     1021 tatgtcacct gtagaagatc agctattccg ggagcatttg ttgaaaactg actgtaagag
     1081 tggaattgat atcatctgta acactgagaa agaaggcaag actttgctag ccttacaact
     1141 ctgtgaatcc tttcttattc cacagctcca gaatggggac atgtactata tatgggagtt
     1201 gattttcata tggagtaaac tacagcttaa atctaatcct tcaaaacaag tgtttgtaga
     1261 tcaatgttac caacttttaa gaacagcaac taatgtgaga gtcatatttc ctttcatgaa
     1321 aatcattaaa gatgaggttg aagaagaagg cttacagatt tgcgttgaga tatgtggttg
     1381 tgctctccag cttgatctcc atgatgatcc tgaaactaaa tgtctaattt ataaaacaat
     1441 tgcacatttt ttgccaaatg atctagagat tgtcagggtt tgtgctctct cagtattttt
     1501 tcttgagcgt tccttagatg cctaccaaac cgttgaagag ctttacagac gtccagatga
     1561 agagtatagt gaaggcacga gtactgttca aaatcgtgtt cgttttgaat tacttccaat
     1621 tttgaaaaag ggattgtttt ttgaccctga gttttggaac ttcgtaatga ttaagaaaaa
     1681 ctgtgtggca ttattacgtg ataaatcagc aatgaaactt ataaatgaaa atacactgga
     1741 aaattctgca ggtagtctaa aaaacagagt ggaacaacag agtgtggaag acgggcttga
     1801 cacactcaca gatctgagca ctggagagac ggatcctgat ggtacatctg tgatgcagcg
     1861 gaaagggcag gttaactcga agagaagcct ctctgttctt aacacttcca aagtggatca
     1921 tagtgtcccc aggcatcggt gcatgttatg taacaaggaa tttcttggtg gccatattgt
     1981 aaggcatgcc caggctcatc agaaaaaagg cagtttttca tgtgtgatat gtggtaggaa
     2041 atttaggaac agaggtctta tgcagaagca tttaaaaaat catgttaaga agattcagag
     2101 gcagcaaatt gctacagcac aacaggatga tccagaaatc atcactttgg aagaaataaa
     2161 tggttccaaa tcttcaattt cctttgaaaa tgggaattca aatactaaga gcttagaaat
     2221 agagacattg actgcttcca gtgagagaaa caaagaggtc acccgtgaac acatggctga
     2281 gttcattaaa attcctattg ctatgccaga gaatgctatg gaaaacattg ttgaaaatgg
     2341 tagaccagat acttctttca ataatatctc agagtcttta tctcagtgtg atgatgacta
     2401 tgaggaggaa gagaatgaag ataattatga agatgattat gatctgaatc aagaaacatc
     2461 agtacttcat aaaatcaatg gaactgtgtg ccatccaaaa gatgtatatg ctacagacca
     2521 agaaggaaac ttcaagtgtc ctgctcttgg ctgtgtaagg atatttaaaa gaattgggtt
     2581 tctaaatatg catgcaagaa ctgtgcatcc aactgattta aatgtgcggc agactgtaat
     2641 gaagtggagc aaaggaaagt gcaaattttg ccaaaggcag tttgaggatt ctcaacactt
     2701 tatagaccac cttaatagac acagctatcc aaatgtgtac ttttgtttgc atttcaactg
     2761 caatgagtca tttaagctgc cattccagct tgcacagcat acaaaaagtc acaggatatt
     2821 tcaagctcag tgtagttttc cagaatgcca tgagcttttt gaagatcttc ctctgttata
     2881 tgaacacgaa gcccagcatt acttaagcaa aacaccagaa tcatctgcac aactgggtga
     2941 agtggttcct aatcatcaga acatagaccc atttagtaat gagaaccaaa cgattcatca
     3001 gccagtttct actagtaaat caaggaaaga ttctacagaa ccaaagacat gtatagacac
     3061 tatggaaaag aaaacagaca gtttagttca gaatggaaat gaacattctg atgatagtgt
     3121 ttcaaatata agcttgatag accaaaagat gcctgccata gagccaaatc ctgaaaataa
     3181 tcatagtccc actgacttag tcaacggaca cagtgaaata gagcaaatgc cattagttac
     3241 atcagatgct actctgaaaa tagacataaa cagaaacggg acagaaaatg gttctgttat
     3301 acccaatgtt atatcacaag aacacagtgc cctgtcagta tctcaggcac catccaaacc
     3361 aaatcttaca agtgaacata cttcatatgg cttaatttta acaaagccat ttgtcagacc
     3421 tttgcctccc agttaccttg atgaacgata ccttagtatg ccaaaacgca gaaaatttct
     3481 gactgatatt gtagatgcct gttctgatca agataacatg tataaaaaac cagtaaaaag
     3541 attacgatgt ggcaaatgcc tgaccaccta ctgtaatgca gaagcacttg aggctcacct
     3601 tgcacaaaag aaatgtcaga cactctttgg atttgattca gatgatgaaa gtgcctgata
     3661 atgtgtcaga acgatctgtt gatcatgcag tagtgttaac aaagcactac aagaaaatgc
     3721 atcatcaatt tgctatttcc ctgatggcct taattttaga gtggtctcgg attactaaag
     3781 aaaagacaaa gcacattttc tggaatgaac ttgcagagga gatgtgccgg cttagactcc
     3841 aaaagggtta taaaactccc aaagtaccag ttatccatga aaccacactt ttaaaaagtt
     3901 tatggtgatt aatagcagca tgttcagttt tgctttatgt gaaaacacat ttgggtaact
     3961 agtcagaaat aaaaaaccag ctatggcctt actgaagaaa ggaaaaagtt gattcattcc
     4021 aagatgaggt ggaggggagc tggtttacaa taaacaatgt aaaacattct gaaaacggaa
     4081 tttgttttct tgtcatgcat attcattatg tcttcccttc tggtcaaaca tattttaaag
     4141 aatcattcgt tgctttttag tttgtgatat aatttagaag ctgatacata gaaataaagc
     4201 ttgatttatc atcatgctgt ctgctaaaga ttataacttg ttttaggtga ttaagtagac
     4261 aggtcaaagt ttagtgaatg gcttgccacc attgaaatat taaaaataaa acaaaaacag
     4321 tgcttggcta ataagctctt gaaaagaacc ttcaacaccc cactctgtaa cgtcatttat
     4381 ttaaaggcag cagtgtgaag tggaaaagaa aggtaccatc agctacttta gtggggtgca
     4441 agaagaatct aagaccactg ccttctagat agttgaagga aaacactgaa ttgaaaaatc
     4501 ttcaatgtga ataatggtaa aagcacactg ggatatttct atctgtacat aatattagga
     4561 cattgctgga tgattcagag tgaagtcctt tacatattag tatgaattat ctaagtatgg
     4621 tcctatgaaa ataattggct taaaagtatg tcggctaaga ataagatcaa gagtttattt
     4681 tattcagtta ggagaattaa ttcaaaatta agccatatta atgtgctttc tttattagtg
     4741 atgaatttgg cctgcacggt gatttttttt ttatatttaa ggaagtattt acatcaaaat
     4801 ttgcacaaca ggaatacaat aacatatatt aatgcattat tgtccttggt gatcattgat
     4861 tttcttaagg aagattttat cttattatta aaacaaatat tttacactta aaatcctcta
     4921 gatatttccc acctgtctgt tatgaaaagg aaaatacctg atatctcctt tacctaatag
     4981 tatataattc taaacaagat aaagacatac aaataaaaaa gtgaattctt tagacatatt
     5041 agtatgccac gtgtcaacta agtgtttcag ctactccagc atggttttct gtgaatcaat
     5101 ttcatcatac aaattttagg aacattgagg ttaggaaaat aggacattac tttcagggtg
     5161 gcattcagac ttttaaaaac tatgtttttc aataatgctg tatcagagga tttatttttt
     5221 aaaaacagtt ctgaatttta ttatttacca tgggcatttg caactatgca atgatggtca
     5281 ctagtccatt ccaatcaaat tgaagtttgt tttaggtttg ttatgtagcc tacattaggc
     5341 tttggaattt acatgcagat aacagataag tgcaactcat gaattttaaa tcctttaatt
     5401 tcaactcaaa atattttcca tatttcctga cactaaaaat gtaataattg acttttattt
     5461 cagttcatat taaaagtgca tcttgtaata aaaatcctgt ttggaaactg gttcatttgc
     5521 acaatgaatt ttttttggaa caaaatttct gctttgtaca ctttgcagtt aattacattt
     5581 tactattttt taactttagt ttttacaggt tgtaaccact gatagatata aattcataaa
     5641 gcattacatt ttcttgaagt ttgtgtgcaa agatgtgtta aacaaattcc gcctgttact
     5701 ttgtccttaa gcttaacttg aaggttttct tttgacttgt gttgctaaga aaaagttttc
     5761 ctatagataa aattggttca tatataacca acccaaaacg tcatgtaaaa ttctgtttga
     5821 ccacattttt tctaacctct ttatatactt ctcattttac ctgttgaaag aatttgtgca
     5881 ttatgatttt ctccaaagca ttttgctttt atgtaaaccc agaagttctg atttgggatt
     5941 cagaaggaaa ggaagcttcc atcttaccta cgttctttcc caactcctcc tttcctactt
     6001 atgttttgag gatacatgaa ccacctttca aatatttgtt ttaaaataaa gaattatatg
     6061 tgtcagtaaa gtcaccaaaa gtgcagatct gaatccttgc tgctcagaca cagaagatgc
     6121 acaggaaaga gtctctccgc ggacaaggac actggtactt tgggctctag ccatattcat
     6181 tttttaaaaa ccatcaccaa tatataacaa aatataattt atatcattga tctgtgattc
     6241 ttttcaaatc acactgaaca tttagctgta ctttcatgtt tggtttaata ttgtatgaat
     6301 gaaaagccta aaagggatga tagtgtttat tttttaattt atttggtact gtcaaacacc
     6361 ttttcagaat gagcaaatgc tgcatttgca ttttggaatt gttttgtgaa agatactaca
     6421 gagattcagc aagaagggaa atttgtgctt ccttgttgaa cattaaatta ttttactttg
     6481 cattttataa aagtacaaat taaaactgag ccattgaact gcaataaatc aacaatagtg
     6541 tctcatttca agaaattttt tgtattgtac atagatttgt tcaataaaac attgtccttg
     6601 ttgataatgc aa
//
