LOCUS       XM_006241920            4537 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 647 (Zfp647),
            mRNA.
ACCESSION   XM_006241920
VERSION     XM_006241920.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 19, 2024 this sequence was replaced by
            NM_001427380.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006241920.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4537
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4537
                     /gene="Zfp647"
                     /note="zinc finger protein 647; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 2 long SRA reads, 55 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 104 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:102555083"
                     /db_xref="RGD:1308203"
     CDS             2301..3905
                     /gene="Zfp647"
                     /codon_start=1
                     /product="zinc finger protein 250"
                     /protein_id="XP_006241982.1"
                     /db_xref="GeneID:102555083"
                     /db_xref="RGD:1308203"
                     /translation="MAAAGLLPLPAAPQAKVTFEDVAVLLSQEEWARLGPAQRGLYRN
                     VMMETYGNVVSLGLPGSKPVVISQLERGEDPWVLDGQETELSQGLGSDHSECKAKEEN
                     QNTDSNAQPLISDEASAMLAETPLRKVDEHYKTEPNFCPSPKSVGPQNAHVLNPSVPV
                     ARPQMAPSGERPYICIECGKCFGRSSHLLQHQRIHTGEKPYVCHVCGKAFSQSSVLSK
                     HRRIHTGEKPYECNECGKAFRVSSDLAQHHKIHTGEKPHECLECGKAFTQLSHLIQHQ
                     RIHTGERPYVCPLCGKAFNHSTVLRSHQRVHTGEKPHGCSECGKTFSVKRTLLQHQRV
                     HTGEKPYTCSECGKAFSDRSVLIQHHNVHTGEKPYECSECGKTFSHRSTLMNHERIHT
                     QEKPYACYECGKAFVQHSHLIQHQRVHTGEKPYVCGECGHAFSARRSLIQHERIHTGE
                     KPFQCTECGKAFSLKATLIVHLRTHTGEKPYECNSCGKAFSQYSVLIQHQRIHTGEKP
                     YECGECGRAFNQHGHLIQHQKVHKKL"
ORIGIN      
        1 aatttttttt tctttttttc ggagctgggg acggaaccca gggccttgca cttgctaggc
       61 aagcgctcta ccacagagct aaatccccaa ccccggaggc tcaattttta aagcgtgtgt
      121 acgttcgctc gcacaagtgc ccacagagac caaaggcctt ggatcccgtg gagttgaagt
      181 tccaggcagt tgtgaggtgc ctgactagga atcaaactca gatctgctga agagatataa
      241 atgctcttaa tgctgggcca tctccacata gccgtcccag ctttttaatc tttcaatcat
      301 tactatttta cttatatatg taggagagtt ttgcctgcat atatctgtat accgtattcc
      361 acctgcatgc agtacccaga caggctagaa gagggcggga gatgccctgg aataggagct
      421 acatggtcgt gctaggctct gaattcagtt tcttggtctt cagtttcatt ggcagaccca
      481 atgttcttaa ccaccaagcc tcctctccag cctccctggc tcccatgttt tagtgaaggc
      541 attagcctta gactgcctcc tctctgtgag cccacatgta gatcagctga taggaaagcc
      601 tgggtgctct tcctttggga agccattcca acctctggtc tagtcttaga aacagccatg
      661 ctaatggata ttttagttag ctggcattgc ttcgacaagc acatagcaaa ggaaggtttc
      721 ctgtggttcg aaggtcagga acagtccatg agggtgggat gatgtgtgcg tacatttgaa
      781 gcagctagtt ggttatattg cgtctgtggt cacggggagg agagcaaatc atgctcacac
      841 tcagttcatt cctcattcaa tcaagaactc tttttttttt ttttaagatt taatgtatat
      901 gagtacactg tagctgtctt cagacacacc agaagagggc atcagatccc attacaaaag
      961 aagacaagta accaatacaa ttagagaaat aaaaattaaa gccataatgg aggggtaggg
     1021 tccggtgcaa ctaaatggga gactatatgc ttaacactca agagtccctg actttggggt
     1081 tggtgattta gctcagtggt agagcgcttg cctagcaaac acaaggccct gggttcggtc
     1141 cccagctccg aaaaaaaaga aaaagaaaaa aaaaaaaaaa aagagtccct gactttaatt
     1201 tccagcagag atatgtgctt gtatggagag gctaagggtc agtctgagga gccatccact
     1261 atggtatttt gttgttgttt ttaagatttg tattttatgt gtacactgtt gctctcttca
     1321 gacacgtcag aagagggcat cagatcccat tacagatagt tgtgagccat gtggtttggt
     1381 tgctgggaat tgaattcagg acctctggaa gaagttacag ttcttaaccg ctgagccatc
     1441 tggccagccc ccttcttttg ttttttgaaa aagctcctca ccagaacctg aagcttgcca
     1501 acgactctag acaggctggc cagcgagcgc tacatagatc ggccttattc tactcccctg
     1561 tgcgggcatg tgcagcaaac acctagactg ttgtattcct ctaggcttgg aataactcat
     1621 ttttaaaaga ctgcttatac caagtgtggg cgaatacaag cagcactggg aatagtcata
     1681 catcgctagc ctagggaatg tgttgatgaa gaaacgtgag acgggcagtt ccttaagaag
     1741 ttaaacgcat acaataccgt aaactaaacc caagcagccg gagtcagcct gatgggttcc
     1801 gggaccagtg gtccaggctg cccgaccact agggaaatcg ctagagggca agcacagatc
     1861 ttggcggaag tgaccgaagg ccctcaggag aacggaggct tcagggaggg ggcgaggcag
     1921 ggaggcactc ggatttgtag ggactgcgcg cgccggcttc cgctactgcc tcaaagagca
     1981 ggcgcggtcg gggtcagaac gcggtctctc taggcacagc ggaggcctcg gctctcggtg
     2041 gccccggggc gctagccaga gttctttact agagcaggag gcgggcggac catccgactc
     2101 tcgggcgtcc cggtccagga ctggagttgg ggggtggggg cctgggggcg gggtcccctg
     2161 agattgacga ctgcgcagac ggggcgggac ggcccctttg tcttagggag ctgaagcagc
     2221 cgccacaggg cgagaggttg cggcagatgc cccacgggat ctcctgattt ctgttgtctt
     2281 cacagtccta agaaaccaag atggcagcag ctggactcct gccactgcca gcagcacccc
     2341 aggccaaggt gacctttgag gatgtggctg ttctactctc tcaagaagag tgggcccgcc
     2401 tgggccctgc tcagcggggc ctctaccgaa acgtcatgat ggagacctac gggaatgtag
     2461 tctcactggg acttccggga tctaagcctg ttgtgatatc ccagctggag cgaggagaag
     2521 atccgtgggt cctggatgga caggaaactg agctgagcca gggcctagga agtgatcact
     2581 cagaatgcaa agccaaggaa gagaaccaaa acacagactc gaatgcgcaa cccttaatct
     2641 cagacgaagc gtcagccatg ttggcggaaa caccgttgag gaaagttgat gaacattaca
     2701 aaacagaacc gaacttctgt ccgagtccaa agtctgttgg cccccagaat gcccacgtgt
     2761 tgaaccccag tgtaccagtt gctcggcccc agatggctcc cagtggagag agaccctata
     2821 tatgcattga gtgtggaaag tgctttggtc ggagctctca cctccttcag catcagcgaa
     2881 tacacactgg cgagaagccc tatgtgtgcc acgtatgcgg caaggccttc agccagagtt
     2941 ctgtccttag taagcacagg cggatccaca cgggcgaaaa gccctatgag tgtaatgaat
     3001 gtgggaaagc ttttcgagtg agctctgacc ttgcccagca ccacaagata cacacgggag
     3061 aaaagcccca cgagtgtctg gaatgtggga aggcgttcac ccagctctcc cacctcatcc
     3121 agcaccagcg gatccacacc ggggagaggc cctatgtgtg tcccttgtgt gggaaagcct
     3181 tcaaccatag caccgtcctg cggagccacc agcgggtgca cactggggag aagccccatg
     3241 ggtgcagcga gtgcgggaag acgttcagtg tgaagaggac gctgctgcag caccagcggg
     3301 tccacactgg ggagaagccc tacacgtgca gcgagtgcgg gaaggccttc agcgaccgct
     3361 ccgtgctcat ccagcatcac aatgtacaca ccggggagaa gccgtacgag tgcagcgagt
     3421 gcggcaagac ctttagccac cgctccaccc tgatgaacca cgagcggatt cacacccagg
     3481 agaagcccta cgcgtgctac gagtgcggga aggcctttgt ccagcactcg cacctcatcc
     3541 agcaccagag agtccacact ggagagaaac cctacgtgtg tggcgaatgc gggcacgctt
     3601 tcagtgcacg caggtccctg atccagcatg agagaatcca cacaggtgag aaaccctttc
     3661 agtgcacaga gtgtggcaaa gctttcagcc tgaaagcaac tctcatcgtg cacctgagga
     3721 cccacaccgg cgagaaaccc tatgagtgca atagctgtgg caaagccttc agccagtact
     3781 cggtgctcat ccagcaccag aggatccaca cgggagagaa accctacgag tgtggtgagt
     3841 gcggtcgtgc cttcaatcaa cacgggcacc tgatccagca tcagaaagtg cacaagaagc
     3901 tgtgatccat ggctgtcaga agcccacact tagggggacc atgcacaaga cctacacaac
     3961 cttcctccag ggaggaattc tgttacatcc agagaccctt cccttggtga ctgtgttaca
     4021 gtctcatgtc cctcctgggg attattttcc tcaacatctt gatgttaaat cagagagtaa
     4081 tcctacaatt gtagatactg ctgaagacgg ccataattct acctttgtct gacatgaatt
     4141 agtttattga agcaactgaa aagctatata tacggtgtag gtactactca catttcaagt
     4201 gaagttcctt ttcttacata gcttcatgac gttctaagtg tatctgatca ttctaatatt
     4261 gtgcttaaat ttagaacgtt ggaccatttt tggtatcctt ttaaaacact taagtgctat
     4321 gttgataaag tgatatcaaa aaacaaacaa acaaacaaac aaacaaaggt cttgggccag
     4381 agagatggct ctgtgggaaa gcctgatgac ccgagtttgc tttctagaat ccatacagtg
     4441 gacagagaga actaactcgc acgagttttc cgctggcttc cgtgtgaatt ccaaacacac
     4501 acaaataaaa cctatatttt aaaatattct taccaaa
//
