LOCUS       XM_039091809            4945 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 644 (Zfp644),
            transcript variant X10, mRNA.
ACCESSION   XM_039091809
VERSION     XM_039091809.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4945
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /note="zinc finger protein 644; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 34
                     ESTs, 3 long SRA reads, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 10 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:305127"
                     /db_xref="RGD:1306805"
     CDS             46..3408
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /codon_start=1
                     /product="zinc finger protein 644 isoform X7"
                     /protein_id="XP_038947737.1"
                     /db_xref="GeneID:305127"
                     /db_xref="RGD:1306805"
                     /translation="MYLPVWSYLTLSHSFQLNVLNDLANNMDDLKINTEVTGAKGELQ
                     DDNFISEKDSGVHKPKDCQTFQKNSALTLSEELSEAQSEQALSGVQSALFIPAGTAAV
                     PSENFTVPTGAVANGPVSRSSSTKTCSMSEGSASLTSEQSTEQLATESCSTLKSVADR
                     QLSTPPKASQHQVLFLLSDAAHTKSPTHSITKLPTSALVGHDGQNPVGNSLKSESTLL
                     SQAEVGGGDAAAAVVRDDRVNALAAISSGTDKFRSENDTNWDPQKEFIQFLMTSEEAV
                     DKSPAHSKVVGLEKKRKRKMDVSKITRYTEDCGGDLGRAPGKSKVLQADFLGQSEETQ
                     AIDSQSYTLPNMKPESADGDLETVDPFQHLVYSSDKCGEGNSPVHTRTLVSNSVKKKC
                     EESDSESPVTFSTEEPSFYPCTKCNVNFREKKHLHRHMMYHLDGNSHFRHLNVPRPYA
                     CRECGRTFRDRNSLLKHMIIHQERRQKLMEEIRELKELQDEGRSARLQCPQCVFGTNC
                     PKTFVQHAKTHEKDKRYYCCEECNFMAVTESELECHRGTAHGAAVKCPVVSSEVSQRK
                     TQKKTVKDSVTGSSRKPAPYLCKMCPFTTSARSILKKHMEYLHSSPCMDSFGNPLGLD
                     KRKSDSLEESVDVDSTKSLAKQQSSTFPKNSALKQDAKRTFGSSPQSSTFSKFHKRPH
                     RVQKARKSIAQSGVNACSQSRSPHKNVMIKNSTDQKPKYFHQAPREKPNAKADGGYLY
                     RYKCDDYRTVRKSGDSYPLPLKKEVSTLNSLHLFSSSNSHNNFISDPHNPDAKRPENE
                     KDHKRVAVKRVLKASKESSGGEDLDSYPDFLHKMTVVVLQKLHSDKNDSYETEDDSPW
                     DNVELGDYRAQAMEEDAYGDLTEEHVNLLPLLKSKMEGQGPGDSAALSYDQSDGFYFE
                     YYEDGGTNNFLQDLHDPPHLENSDTPLSKHSSVFHWTDLSLEKKSCPYCPATFETGVG
                     LSNHVRGHLHRAGLSYEARHVVSPEQIATSDKMQHFKRTGTGTPVKRVRKAIDCKQKK
                     SRSRSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVNANLPR
                     TGAGMVEVTSLLKKPASITETSFSLLMAEAAS"
ORIGIN      
        1 aataaaccaa actttagcga caagccggtg tcagtgctta gctgtatgta tttgcccgtg
       61 tggagctact taacactttc ccacagtttt caactaaatg tgttaaatga ccttgccaac
      121 aatatggatg atttgaagat aaacactgag gttactggtg ctaaaggaga gctccaagat
      181 gacaatttca tctcagagaa agacagtggt gttcataaac caaaagattg ccagacattt
      241 cagaagaaca gtgcattgac tctgtctgaa gaattgtcag aggctcaatc agaacaagcc
      301 ttaagtggag tccagtctgc tctgtttatc cctgccggca ctgctgctgt tcctagtgaa
      361 aactttaccg tgcccacagg ggctgttgct aatggaccag tttctcgctc ctcctcaaca
      421 aagacttgca gtatgagtga gggcagtgct tccctaacct ctgaacagtc cacggagcag
      481 ctagcaacag aatcttgctc aactctgaag tcagtagctg accgtcagct gtcgacacca
      541 ccaaaagcca gccagcacca agttctcttt ctgttatcag atgcagcgca tacgaagagt
      601 ccgacccatt ccattacgaa actgcctacc tctgctttag tcggtcatga tggtcagaat
      661 ccagtaggga atagcttgaa gtcagagagc actttactaa gtcaagcaga ggtgggcggg
      721 ggtgacgccg cggctgcggt ggtcagagac gaccgcgtca acgcgttagc agcgatttcc
      781 tcagggacag acaaatttag gtcagaaaat gatacaaact gggaccccca aaaagagttc
      841 attcagtttc ttatgacgag cgaagaggcc gtggacaagt ccccagctca ttctaaagta
      901 gtgggtctag aaaagaagag gaagagaaag atggacgtga gcaaaatcac tcgctacacg
      961 gaggactgcg gtggtgactt gggccgcgcc cccgggaagt caaaagtgct gcaggctgac
     1021 tttctagggc aaagtgagga gacacaggcc atagactcac agagctacac attgccaaac
     1081 atgaaacctg agtcagctga cggagacctg gagactgtgg atccttttca gcatctagtt
     1141 tatagctcag ataaatgtgg ggagggtaat tcacctgttc acactcgcac tttagtttca
     1201 aatagcgtaa agaagaaatg tgaagagagt gattcggagt cacctgtcac tttcagtact
     1261 gaagagccat ccttctaccc ctgtacaaag tgcaatgtga actttaggga gaaaaagcat
     1321 ctccacaggc atatgatgta tcatttagat gggaatagtc actttcgcca ccttaacgtc
     1381 cccaggccat atgcttgtag agaatgtgga cggacctttc gagatcgtaa ttcactgcta
     1441 aaacatatga tcattcacca agaaagacgg cagaagctga tggaggagat ccgtgagttg
     1501 aaagagctcc aagatgaagg cagaagtgcc cgtctgcagt gccctcagtg tgtgtttggt
     1561 accaattgtc ctaagacgtt tgtgcagcac gctaaaaccc acgagaaaga caaacggtac
     1621 tactgctgtg aggagtgcaa cttcatggcc gtgacagaga gtgagctgga atgtcatcga
     1681 ggcactgccc acggggcggc cgtcaagtgc cctgtcgtca gttcagaagt aagccagaga
     1741 aaaacacaaa aaaagaccgt gaaagactct gttacaggat cgtccaggaa gccagctcca
     1801 tacctgtgta agatgtgccc ctttacgact tcagccagaa gcattctgaa gaagcacatg
     1861 gagtatttgc attcctcgcc gtgcatggat tcctttggta atcctcttgg acttgacaaa
     1921 agaaaaagtg acagccttga ggagtccgtg gatgtcgaca gcaccaagtc attagctaaa
     1981 cagcagtcca gtacgtttcc aaagaactct gctttaaaac aggatgctaa gcgcacattc
     2041 ggatccagcc cacagtcaag tactttttca aaatttcaca agcggccaca tcgagtacag
     2101 aaggcccgga aaagcattgc ccagtctggt gtaaatgcat gcagtcagag caggtctcct
     2161 cataagaacg ttatgattaa aaacagcact gaccaaaaac caaagtattt ccatcaggcc
     2221 ccaagagaaa aacccaacgc caaggcagac ggcggttatt tatatagata caagtgtgac
     2281 gactaccgga cggtcagaaa gtcaggtgat tcatacccac ttcctctcaa aaaagaggtt
     2341 agcacattaa actctttaca tctgttttca tcaagtaatt ctcataataa ttttatttca
     2401 gaccctcata acccagatgc caaaaggcca gaaaacgaga aagaccacaa gcgtgtagct
     2461 gtgaaaagag tacttaaggc ttcaaaggaa agctctggtg gagaggactt ggatagctat
     2521 cccgactttc tgcataaaat gactgttgtt gttttgcaga agcttcattc tgataagaac
     2581 gatagctatg agacagaaga tgacagtccc tgggataacg tggagctagg tgactacaga
     2641 gcgcaggcca tggaggaaga tgcctacggt gaccttactg aagagcacgt aaacttactg
     2701 cccctattga aaagcaagat ggaaggccag ggccctggag acagtgctgc cctgagttac
     2761 gatcagagtg acggcttcta ctttgagtat tacgaagacg gtggcactaa caacttctta
     2821 caggatctac atgatcctcc gcatttggaa aactcagaca cgcctttgtc caagcatagt
     2881 tctgtttttc attggactga tttgtctctg gagaagaagt catgtcctta ctgcccagca
     2941 acatttgaaa ccggtgttgg gctgtcaaat cacgtccgcg gacatcttca cagagcagga
     3001 ttaagctacg aagcccgtca tgttgtgtca ccagaacaaa tagccacaag tgacaagatg
     3061 cagcatttca aaagaactgg cacagggacg cccgtgaaac gagttagaaa agccatagat
     3121 tgtaagcaga agaaatcaag gtcaagatct ggaagcaaga agaaaatgct aacgttacct
     3181 catggtgctg acgaggttta cattctccga tgcaggtttt gtggcctagt ctttcgggga
     3241 ccattgtctg ttcaggagga ctggattaag cacttacagc ggcacattgt aaacgctaac
     3301 cttccacgga ctggagctgg catggtggaa gtcacatcac tacttaaaaa gcctgcctct
     3361 atcacagaaa cgtcgttttc cttactgatg gcagaagcag catcatagaa ccaggaatcc
     3421 ttttcagtag catattccat tggatgtaaa tttaaaattt gtcttttttt tttttttttt
     3481 tttttggtaa gccacatgaa agtatccatt tataaatact aaagtaggaa aaatggggga
     3541 ccctaaatta gagtggtatc agagcaaaca atacttaaga cagacagtaa gtagtctgta
     3601 tgttttatat agggtgggaa tgtgtttaag gtttactagg ttttgttggc tgagttttct
     3661 cagctgaagg tcctacatct gagagccatc tgtaaagtgt tgcacatgaa tccttacaga
     3721 cagacagact tactgaaaga ttatgttctc tgcagtgtta ccagaatcaa ggctctggtt
     3781 tttccccaca cttacataga aaaataagat attatatttt gttggtatgt atttagtgtt
     3841 ttgtataata ccaggaactg ctaactaaat ttactcaact tagggcatta aatatcatgt
     3901 acttcatagt ttgagactgt tcccccgaat agggcagagt attctattct atctagatgt
     3961 gtaagtgttt ttgttttttt ttaatcataa tggaacggtt tttttttaat atatatatat
     4021 acatatatat atatactaaa aagtcggagg gagatttgtt taaacgagta tttctaagag
     4081 aaatattgta catagtcttg gcgattactt gtggtaagga aatgtccttt aatccagttg
     4141 catttctcag acaatgaagt ggtgcgccct gctacctcct actttgtcaa caaagatgct
     4201 attattaccc tctccatttt gtaccataat agattttaaa aatctaatgt tctttattgc
     4261 aagacatgct tttgttaact gatttgtttc tttgtaacat tttacgtaca gtttgacatg
     4321 ctcacaggac agggttgtct gtttatttaa cattgtagat gtgtaattaa taaacaaggc
     4381 tcactacacg atttagagta ggcttcctca tttatgttct cttccaaatt cgatcagtta
     4441 gcaaaactat taatacacaa aatatttcta catatgatga gaatgtttac aatttcagtt
     4501 tagagcttgt tttggatgtg attatctatg tatgaaaatt gtgtaacact atgctcatgc
     4561 taagaccgac ataacggagt ttactgaagt aaatgtgctg tgaggaatgc acagtgtggt
     4621 gcaggtgtct tggtcatggg aacctgtgac gattccctcg atcactgtcc aaagcagctg
     4681 ctccttcctc tacaacgagc gccgcttaca aacagcagtt tgtgtgcacg cgccgtccag
     4741 ccattccacg gagttgctga tgtggctgca ccaaggctct gcattcgtac ttttcatcat
     4801 ctgtaaatac atccggacag ttacatggag gagtgcttgg tgtcgagtag tacatacctc
     4861 actgccagtg agactgcttt cctatggtat atctccttgc cagaaatcac taaataaaga
     4921 cttcaagaat tacagtgcct ccaat
//
