LOCUS       NM_001139484            5723 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus zinc finger protein 644 (Zfp644), mRNA.
ACCESSION   NM_001139484 XM_001062824 XM_039091808 XM_223150
VERSION     NM_001139484.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5723)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000247.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001139484.3.
            
            On or before Dec 30, 2022 this sequence version replaced
            XM_039091808.1, NM_001139484.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132291,
                              SAMD00132292 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-293               JACYVU010000247.1  3105324-3105616
            294-354             JACYVU010000247.1  3134220-3134280
            355-2567            JACYVU010000247.1  3158141-3160353
            2568-3278           JACYVU010000247.1  3160450-3161160
            3279-3884           JACYVU010000247.1  3161336-3161941
            3885-3987           JACYVU010000247.1  3177289-3177391
            3988-5723           JACYVU010000247.1  3178226-3179961
FEATURES             Location/Qualifiers
     source          1..5723
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..5723
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /note="zinc finger protein 644"
                     /db_xref="GeneID:305127"
                     /db_xref="RGD:1306805"
     exon            1..293
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /inference="alignment:Splign:2.1.0"
     exon            294..354
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /inference="alignment:Splign:2.1.0"
     CDS             311..4180
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /codon_start=1
                     /product="zinc finger protein 644"
                     /protein_id="NP_001132956.1"
                     /db_xref="GeneID:305127"
                     /db_xref="RGD:1306805"
                     /translation="MRLFLHRDVNKPNFRLNVLNDLANNMDDLKINTEVTGAKGELQD
                     DNFISEKDSGVHKPKDCQTFQKNSALTLSEELSEAQSEQALSGVQSALFIPAGTAAVP
                     SENFTVPTGAVANGPVSRSSSTKTCSMSEGSASLTSEQSTEQLATESCSTLKSVADRQ
                     LSTPPKASQHQVLFLLSDAAHTKSPTHSITKLPTSALVGHDGQNPVGNSLKSESTLLS
                     QAEVGGGDAAAAVVRDDRVNALAAISSGTDKFRSENDTNWDPQKEFIQFLMTSEEAVD
                     KSPAHSKVVGLEKKRKRKMDVSKITRYTEDCGGDLGRAPGKSKVLQADFLGQSEETQA
                     IDSQSYTLPNMKPESADGDLETVDPFQHLVYSSDKCGEGNSPVHTRTLVSNSVKKKCE
                     ESDSESPVTFSTEEPSFYPCTKCNVNFREKKHLHRHMMYHLDGNSHFRHLNVPRPYAC
                     RECGRTFRDRNSLLKHMIIHQERRQKLMEEIRELKELQDEGRSARLQCPQCVFGTNCP
                     KTFVQHAKTHEKDKRYYCCEECNFMAVTESELECHRGTAHGAAVKCPVVSSEVSQRKT
                     QKKTVKDSVTGSSRKPAPYLCKMCPFTTSARSILKKHMEYLHSSPCMDSFGNPLGLDK
                     RKSDSLEESVDVDSTKSLAKQQSSTFPKNSALKQDAKRTFGSSPQSSTFSKFHKRPHR
                     VQKARKSIAQSGVNACSQSRSPHKNVMIKNSTDQKPKYFHQAPREKPNAKADGGYLYR
                     YKCDDYRTVRKSDPHNPDAKRPENEKDHKRVAVKRVLKASKESSGGEDLDSYPDFLHK
                     MTVVVLQKLHSDKNDSYETEDDSPWDNVELGDYRAQAMEEDAYGDLTEEHVNLLPLLK
                     SKMEGQGPGDSAALSYDQSDGFYFEYYEDGGTNNFLQDLHDPPHLENSDTPLSKHSSV
                     FHWTDLSLEKKSCPYCPATFETGVGLSNHVRGHLHRAGLSYEARHVVSPEQIATSDKM
                     QHFKRTGTGTPVKRVRKAIEKSETTSEHTCQLCGGWFDTKIGLSNHVRGHLKRLGKTK
                     WDAHKSPICVLNEMMQNEEKYEKILKALSSRRIIPRPFVAQKLSSDDDFLSHNVLPLD
                     EYHNGLKTEALSVSASEEEGLNFLNECDETKPDLPSGKKNQSLTLIELLKSRRIGEER
                     NSALSPHKIHNQTARKRFVQKCVLPLNEDSPLIYQPHKMDLTVHSAIDCKQKKSRSRS
                     GSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVNANLPRTGAGM
                     VEVTSLLKKPASITETSFSLLMAEAAS"
     exon            355..2567
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /inference="alignment:Splign:2.1.0"
     exon            2568..3278
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /inference="alignment:Splign:2.1.0"
     exon            3279..3884
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /inference="alignment:Splign:2.1.0"
     exon            3885..3987
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /inference="alignment:Splign:2.1.0"
     exon            3988..5723
                     /gene="Zfp644"
                     /gene_synonym="RGD1306805; Znf644"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttcgggggtc ttattttggt tggattagcc cgggccccgg ctgcatttcg gacgtccggg
       61 ctgaggcggt ggcgggactg agggtggcgg aagaagttgt gggggaaccc ggcccgcggc
      121 gctcgggccc ggggagctac gccctaggct ggctcccaac cctccgaaag gacgcgtttt
      181 gccgcacagg ctaagatggc ggcggttgcc gaggaggcgg agttgctgct gcagaagaag
      241 cccgggtcgc ggggtccggg aggcggcggt cgcggggggc cgcggaacct taggcttgat
      301 ttaattttgg atgagattat tcttacatcg agatgttaat aaaccaaact ttagactaaa
      361 tgtgttaaat gaccttgcca acaatatgga tgatttgaag ataaacactg aggttactgg
      421 tgctaaagga gagctccaag atgacaattt catctcagag aaagacagtg gtgttcataa
      481 accaaaagat tgccagacat ttcagaagaa cagtgcattg actctgtctg aagaattgtc
      541 agaggctcaa tcagaacaag ccttaagtgg agtccagtct gctctgttta tccctgccgg
      601 cactgctgct gttcctagtg aaaactttac cgtgcccaca ggggctgttg ctaatggacc
      661 agtttctcgc tcctcctcaa caaagacttg cagtatgagt gagggcagtg cttccctaac
      721 ctctgaacag tccacggagc agctagcaac agaatcttgc tcaactctga agtcagtagc
      781 tgaccgtcag ctgtcgacac caccaaaagc cagccagcac caagttctct ttctgttatc
      841 agatgcagcg catacgaaga gtccgaccca ttccattacg aaactgccta cctctgcttt
      901 agtcggtcat gatggtcaga atccagtagg gaatagcttg aagtcagaga gcactttact
      961 aagtcaagca gaggtgggcg ggggtgacgc cgcggctgcg gtggtcagag acgaccgcgt
     1021 caacgcgtta gcagcgattt cctcagggac agacaaattt aggtcagaaa atgatacaaa
     1081 ctgggacccc caaaaagagt tcattcagtt tcttatgacg agcgaagagg ccgtggacaa
     1141 gtccccagct cattctaaag tagtgggtct agaaaagaag aggaagagaa agatggacgt
     1201 gagcaaaatc actcgctaca cggaggactg cggtggtgac ttgggccgcg cccccgggaa
     1261 gtcaaaagtg ctgcaggctg actttctagg gcaaagtgag gagacacagg ccatagactc
     1321 acagagctac acattgccaa acatgaaacc tgagtcagct gacggagacc tggagactgt
     1381 ggatcctttt cagcatctag tttatagctc agataaatgt ggggagggta attcacctgt
     1441 tcacactcgc actttagttt caaatagcgt aaagaagaaa tgtgaagaga gtgattcgga
     1501 gtcacctgtc actttcagta ctgaagagcc atccttctac ccctgtacaa agtgcaatgt
     1561 gaactttagg gagaaaaagc atctccacag gcatatgatg tatcatttag atgggaatag
     1621 tcactttcgc caccttaacg tccccaggcc atatgcttgt agagaatgtg gacggacctt
     1681 tcgagatcgt aattcactgc taaaacatat gatcattcac caagaaagac ggcagaagct
     1741 gatggaggag atccgtgagt tgaaagagct ccaagatgaa ggcagaagtg cccgtctgca
     1801 gtgccctcag tgtgtgtttg gtaccaattg tcctaagacg tttgtgcagc acgctaaaac
     1861 ccacgagaaa gacaaacggt actactgctg tgaggagtgc aacttcatgg ccgtgacaga
     1921 gagtgagctg gaatgtcatc gaggcactgc ccacggggcg gccgtcaagt gccctgtcgt
     1981 cagttcagaa gtaagccaga gaaaaacaca aaaaaagacc gtgaaagact ctgttacagg
     2041 atcgtccagg aagccagctc catacctgtg taagatgtgc ccctttacga cttcagccag
     2101 aagcattctg aagaagcaca tggagtattt gcattcctcg ccgtgcatgg attcctttgg
     2161 taatcctctt ggacttgaca aaagaaaaag tgacagcctt gaggagtccg tggatgtcga
     2221 cagcaccaag tcattagcta aacagcagtc cagtacgttt ccaaagaact ctgctttaaa
     2281 acaggatgct aagcgcacat tcggatccag cccacagtca agtacttttt caaaatttca
     2341 caagcggcca catcgagtac agaaggcccg gaaaagcatt gcccagtctg gtgtaaatgc
     2401 atgcagtcag agcaggtctc ctcataagaa cgttatgatt aaaaacagca ctgaccaaaa
     2461 accaaagtat ttccatcagg ccccaagaga aaaacccaac gccaaggcag acggcggtta
     2521 tttatataga tacaagtgtg acgactaccg gacggtcaga aagtcagacc ctcataaccc
     2581 agatgccaaa aggccagaaa acgagaaaga ccacaagcgt gtagctgtga aaagagtact
     2641 taaggcttca aaggaaagct ctggtggaga ggacttggat agctatcccg actttctgca
     2701 taaaatgact gttgttgttt tgcagaagct tcattctgat aagaacgata gctatgagac
     2761 agaagatgac agtccctggg ataacgtgga gctaggtgac tacagagcgc aggccatgga
     2821 ggaagatgcc tacggtgacc ttactgaaga gcacgtaaac ttactgcccc tattgaaaag
     2881 caagatggaa ggccagggcc ctggagacag tgctgccctg agttacgatc agagtgacgg
     2941 cttctacttt gagtattacg aagacggtgg cactaacaac ttcttacagg atctacatga
     3001 tcctccgcat ttggaaaact cagacacgcc tttgtccaag catagttctg tttttcattg
     3061 gactgatttg tctctggaga agaagtcatg tccttactgc ccagcaacat ttgaaaccgg
     3121 tgttgggctg tcaaatcacg tccgcggaca tcttcacaga gcaggattaa gctacgaagc
     3181 ccgtcatgtt gtgtcaccag aacaaatagc cacaagtgac aagatgcagc atttcaaaag
     3241 aactggcaca gggacgcccg tgaaacgagt tagaaaagct atagagaagt ctgagactac
     3301 ttccgaacat acttgtcagc tctgtggtgg ttggtttgac acaaagattg ggttatcaaa
     3361 tcatgtcaga ggccatctga aaagacttgg gaaaactaag tgggatgctc acaagtcccc
     3421 catctgtgtt ctgaacgaga tgatgcagaa cgaagagaag tatgaaaaga tcctgaaggc
     3481 gctcagcagc cgccgcatta tccccagacc attcgtagct cagaaactct cctcagatga
     3541 tgacttcctt tctcacaatg tcttacctct tgatgaatac cacaatggcc taaagacaga
     3601 ggctctctca gtgtctgcat cagaggaaga agggctgaat ttcttaaatg agtgtgatga
     3661 aacaaagcct gacctgccca gtgggaaaaa gaaccagtct ctcacactga tagagctcct
     3721 taaaagtagg aggataggag aagaaaggaa ctcggctctg tctcctcaca agatccataa
     3781 ccagacagca agaaagagat ttgttcagaa atgtgttctt ccattaaacg aagacagtcc
     3841 gttgatctat cagccacaca aaatggactt gactgtgcac tcagccatag attgtaagca
     3901 gaagaaatca aggtcaagat ctggaagcaa gaagaaaatg ctaacgttac ctcatggtgc
     3961 tgacgaggtt tacattctcc gatgcaggtt ttgtggccta gtctttcggg gaccattgtc
     4021 tgttcaggag gactggatta agcacttaca gcggcacatt gtaaacgcta accttccacg
     4081 gactggagct ggcatggtgg aagtcacatc actacttaaa aagcctgcct ctatcacaga
     4141 aacgtcgttt tccttactga tggcagaagc agcatcatag aaccaggaat ccttttcagt
     4201 agcatattcc attggatgta aatttaaaat ttgtcttttt tttttttttt tttttttggt
     4261 aagccacatg aaagtatcca tttataaata ctaaagtagg aaaaatgggg gaccctaaat
     4321 tagagtggta tcagagcaaa caatacttaa gacagacagt aagtagtctg tatgttttat
     4381 atagggtggg aatgtgttta aggtttacta ggttttgttg gctgagtttt ctcagctgaa
     4441 ggtcctacat ctgagagcca tctgtaaagt gttgcacatg aatccttaca gacagacaga
     4501 cttactgaaa gattatgttc tctgcagtgt taccagaatc aaggctctgg tttttcccca
     4561 cacttacata gaaaaataag atattatatt ttgttggtat gtatttagtg ttttgtataa
     4621 taccaggaac tgctaactaa atttactcaa cttagggcat taaatatcat gtacttcata
     4681 gtttgagact gttcccccga atagggcaga gtattctatt ctatctagat gtgtaagtgt
     4741 ttttgttttt ttttaatcat aatggaacgg ttttttttta atatatatat atacatatat
     4801 atatatacta aaaagtcgga gggagatttg tttaaacgag tatttctaag agaaatattg
     4861 tacatagtct tggcgattac ttgtggtaag gaaatgtcct ttaatccagt tgcatttctc
     4921 agacaatgaa gtggtgcgcc ctgctacctc ctactttgtc aacaaagatg ctattattac
     4981 cctctccatt ttgtaccata atagatttta aaaatctaat gttctttatt gcaagacatg
     5041 cttttgttaa ctgatttgtt tctttgtaac attttacgta cagtttgaca tgctcacagg
     5101 acagggttgt ctgtttattt aacattgtag atgtgtaatt aataaacaag gctcactaca
     5161 cgatttagag taggcttcct catttatgtt ctcttccaaa ttcgatcagt tagcaaaact
     5221 attaatacac aaaatatttc tacatatgat gagaatgttt acaatttcag tttagagctt
     5281 gttttggatg tgattatcta tgtatgaaaa ttgtgtaaca ctatgctcat gctaagaccg
     5341 acataacgga gtttactgaa gtaaatgtgc tgtgaggaat gcacagtgtg gtgcaggtgt
     5401 cttggtcatg ggaacctgtg acgattccct cgatcactgt ccaaagcagc tgctccttcc
     5461 tctacaacga gcgccgctta caaacagcag tttgtgtgca cgcgccgtcc agccattcca
     5521 cggagttgct gatgtggctg caccaaggct ctgcattcgt acttttcatc atctgtaaat
     5581 acatccggac agttacatgg aggagtgctt ggtgtcgagt agtacatacc tcactgccag
     5641 tgagactgct ttcctatggt atatctcctt gccagaaatc actaaataaa gacttcaaga
     5701 attacagtgc ctccaatgtg aaa
//
