LOCUS       NM_001106792            4260 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 641 (Zfp641), mRNA.
ACCESSION   NM_001106792 XM_001061309 XM_235625
VERSION     NM_001106792.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4260)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001106792.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643297.26954.1,
                                           SRR26643287.19178.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                JAXUCZ010000007.1  131323661-131323691 c
            32-240              JAXUCZ010000007.1  131321303-131321511 c
            241-332             JAXUCZ010000007.1  131320554-131320645 c
            333-462             JAXUCZ010000007.1  131319239-131319368 c
            463-576             JAXUCZ010000007.1  131318567-131318680 c
            577-4260            JAXUCZ010000007.1  131313624-131317307 c
FEATURES             Location/Qualifiers
     source          1..4260
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..4260
                     /gene="Zfp641"
                     /gene_synonym="RGD1310412; Znf641"
                     /note="zinc finger protein 641"
                     /db_xref="GeneID:300197"
                     /db_xref="RGD:1310412"
     exon            1..31
                     /gene="Zfp641"
                     /gene_synonym="RGD1310412; Znf641"
                     /inference="alignment:Splign:2.1.0"
     exon            32..240
                     /gene="Zfp641"
                     /gene_synonym="RGD1310412; Znf641"
                     /inference="alignment:Splign:2.1.0"
     CDS             57..1322
                     /gene="Zfp641"
                     /gene_synonym="RGD1310412; Znf641"
                     /codon_start=1
                     /product="zinc finger protein 641"
                     /protein_id="NP_001100262.1"
                     /db_xref="GeneID:300197"
                     /db_xref="RGD:1310412"
                     /translation="MLSEQSVAPGAGWEPMSAQLDAAEPGSERGAREEGPWRTAPRPL
                     EHLHSGLEDETLSLQEKAPSAPWVPAVPQEGDTGDWEMAAALLAAGSQGLVTIKDVSL
                     CFSQEEWRSLDPSQTDFYGEYVMQENCGIVVSLRFPIPKLDMLPQLEGGEEQWVPDPQ
                     DVEGRDIRKVTYAGDGGEPKGDTPELETEPSRTLSSMSEETVLWNPGQGPSWRSMPSS
                     STGTLPRPRFLQEDSVSHLLRSTDTDSLLKPHTCPQCGKQFVWGSHLARHQQTHTGER
                     PYSCLKCEKSFGRRHHLIRHQKTHLHDKPSRCPECGKTFRCSSHLASHQRVHADSKSC
                     KGQEIGESPGAQCAPPVPKCHVCTECGKSFGRRHHLVRHWLTHTGEKPFHCPRCEKSF
                     GRKHHLDRHLLTHQGQSPGSSWDRGTSAF"
     exon            241..332
                     /gene="Zfp641"
                     /gene_synonym="RGD1310412; Znf641"
                     /inference="alignment:Splign:2.1.0"
     exon            333..462
                     /gene="Zfp641"
                     /gene_synonym="RGD1310412; Znf641"
                     /inference="alignment:Splign:2.1.0"
     exon            463..576
                     /gene="Zfp641"
                     /gene_synonym="RGD1310412; Znf641"
                     /inference="alignment:Splign:2.1.0"
     exon            577..4260
                     /gene="Zfp641"
                     /gene_synonym="RGD1310412; Znf641"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgggaggca gtgccaaggg gccgagcccg ggtcctagcg ggcactcact gcagacatgc
       61 tttcggaaca gagcgtagcc ccgggtgcag gatgggagcc aatgagtgca cagctggatg
      121 cagcggaacc cgggtcagaa agaggagccc gggaagaggg cccgtggaga acagcaccaa
      181 ggccgctgga gcaccttcac agtggtcttg aagacgagac actgtccctt caggagaagg
      241 caccgtctgc tccctgggtt cctgccgtcc cccaggaggg ggacactgga gactgggaaa
      301 tggcagccgc acttcttgca gctgggtccc agggcctagt aactatcaag gatgtgtcct
      361 tatgcttctc tcaggaggag tggcggagcc tggacccctc ccagacagac ttttacggag
      421 aatatgtcat gcaggaaaat tgtgggatcg tcgtctctct gaggtttccc atccccaaac
      481 tggacatgct tcctcagcta gaaggaggag aagaacagtg ggtccctgac ccccaggacg
      541 tagaggggag ggacatccgg aaggtcacgt atgcaggaga cggaggtgaa cccaagggtg
      601 atactcctga gctagagaca gaaccttcca gaacattatc cagtatgtct gaagaaactg
      661 ttctctggaa cccagggcag ggtccaagct ggaggtccat gcccagcagt tccacaggaa
      721 cgctcccaag accacggttc cttcaggagg acagcgtctc tcatctccta cgcagcacag
      781 acacggactc tctcttaaaa ccacatacgt gccctcagtg tgggaaacag tttgtgtggg
      841 gctcccacct tgcccgacac cagcaaacac acactggaga gaggccctac agctgcctca
      901 agtgtgagaa aagctttggg cgaaggcatc acctgatcag gcaccagaaa acccatctgc
      961 acgacaagcc aagcaggtgt cctgagtgtg gcaagacttt ccgatgcagc tcccacctgg
     1021 ccagccacca gagagtgcac gcggacagca agtcctgcaa gggccaagaa attggagaga
     1081 gtcctggggc tcagtgtgcc ccaccagtgc caaagtgcca cgtgtgcacg gaatgtggga
     1141 agagctttgg ccgaagacac cacctagtga gacactggct aacccatact ggggagaagc
     1201 ccttccattg ccctcgctgt gagaagagct ttggccgtaa gcaccacctg gacaggcact
     1261 tgctgaccca ccagggacag agtcctggga gcagctggga cagagggaca tctgcctttt
     1321 gaaatctgtc tcttctgtag ctacggtgat atctataagc cggtgctacc agcagccact
     1381 gccagagccg tccctctcct gtacccagag aacgggagta tttctcacct cttctgtgag
     1441 acaacgtgca aaaacagagt tctttgggca aaatttgggg aaatggtgca aagtctgttt
     1501 gtgcctattc atcctgaacc tactctcaag ggtacagcgg aaccagcagt gatggttgag
     1561 gtctatgcgg taccaatttc taaatattta ctctacagag agaataggtg aaagggtccg
     1621 ttgtgagtat atcaagggct ctgagatcct ccgcagatgg tttctgtttg tgtaatgttt
     1681 cctaaatttg tttggcccca ggatctattt catatcccac agaatgggtg actccatgaa
     1741 gtttacttct gtgagcactg ggctaaactg caaggaggaa acaggaaaga gatggtgacc
     1801 aggcattcag agcctgagag ccaggggcca gacattctct gtgggtctgc ctctcttccc
     1861 cagtgattac acacctctca ctcctacctc tgcaaagtat agagtgactg ttcactcgaa
     1921 attcgtattc ccctcatcct gcacacacac acacacacac acacacacaa acacacacgt
     1981 gcacacacat gcacacacat gcacatgcac accacacaca cacacacaca cacacacaca
     2041 cacacacaca cacacacaca tatgaggttg agagatcagg ttacagaact gaagagtgaa
     2101 ttttataccc ctaagtaatc aaggcccaca cggaaggaaa aatattccct tgaacagagt
     2161 tttctcttgt ctgtgttttt gtgtccgtgt gtatatgtgt gcagggtctt tgaagacagc
     2221 atgctcagtg caaattgtac aatttagctt ttctaggaat tgtgttctag ggataagggt
     2281 agtggggaca gtatgagttt ttggttttgt tcaaatgtat tctgagcggt gaagggagtc
     2341 gtggtggagt ggtgtaatga cggcttaact tgtgtacaaa gttttcctcg gtattcccgg
     2401 gatgtagaca gttgtggact tgtatatcta ggtccggatc tctgggaaga aattctcttt
     2461 ccctgcagag acagaaaggg acagtgactt ttgattgttg ttgacctcaa gcgatgtgac
     2521 ggtggttcgt gttgcgtggg gttcggtctt gttctgtgtg aagtgctaaa agtaattagg
     2581 gaagggatca tggcgctggg agtctttctc atcatcctag tttggcattc atcagaggga
     2641 agaattgttg ctgagcacct cattctccca ggaaaacgaa ctcgaggagc taaggctgtc
     2701 gcttaccttg gcagcttgag ggtaatgagc ttcctgccgg tgttgaacct tccagttctg
     2761 ggaagggctt cacacccaag actctcgcct cgaaggttaa tgcctgcacc aggggggttc
     2821 agacaaacat gctcacactt gtctggtcat ttgttttcat cgtttttttt ttctttttgg
     2881 tgattgtgtt aatgcccgtc ttacaactta acctctattt aagagaagtt tggggtgagg
     2941 gaggaaaaga agaatgtgaa agtgggtgtt ttcaaggttc ccaggctact tttttctcct
     3001 tgaggtattt atttctccaa cactgttgga attagccaga gagccaggag ggagtgggtt
     3061 ttcagaaatc tagttaatga gcgctctgct caggcaaagc tgggtgaatc agacagagcc
     3121 cttgggccct tggctcaaga ggaattgaaa tggagtcatt ctgctgactg ggcattttgt
     3181 ttatttgagc aacccagcca ccaacccctc tctgatgctg ctaagaatgc cctccctcct
     3241 tcctccttcc tccttccttc ccttcctccc tccctccctc cctgagctgg ggtgcattct
     3301 cttgcctatg ctctgatgaa ttaagcaaaa aaatgggcag ccttttgcaa gcaggccttg
     3361 gcctcccagg attagaatca ctctagaacc agtgttatga gaatgagaga aaaaaatctc
     3421 ccactttgat acaaagattt aagagaagtc agttctgtgc aaagccagaa ctgttctctg
     3481 tagcagaaca tctttcaact taagagatcc cttgggaatc tgatggaaac tggaatttaa
     3541 ctttgcagaa aagtagacat ttacaaccca ctcatttgca tatgcatgaa gtggactctg
     3601 agcctgctgg gcatctccga aggggaggaa tagttgttag cgatatcgta cacctttaat
     3661 cccagcggtg gggaggcaga gggagattac ttctatgttc tggatgagcc aaggcaatat
     3721 aatgccgtcc tgtctgaaaa aaacagaagg aacttaacct gcctgactct ggttgttgta
     3781 tacatgatac ctgtgccaag aattacaagg caagattcag taagtatttt aaggacttaa
     3841 atactggaag gcaccaagag acaaggacag agccaggcct gcaatgactt ggatactgct
     3901 tatactgacc gtactctgct cttagggaac atcgccatgc tcacggctca gctcacacaa
     3961 ctggttttaa agacttgtgg gagttatgtt cctacttaac agatgatacc tcttaacagt
     4021 ttaaacctcc agccttttat ctactttagt aattgcaggg atagaaagtg gagcccccca
     4081 acccaagggg taggtgcagt tacagcaccc aattgagaag cagcacagag tttaagggct
     4141 tttttctttt cctttttttt tttttttttg taaaaggaac agtcttttga ctcatttctg
     4201 gtttctacct cggtccaata ccaacgcctt tggacaaaca ataaaacaag caacggccat
//
